RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-240	ENST00000514055	NECTIN2	Q92692	538 aa		11.18	□□□□□ -0.62
CAST-240	ENST00000514055	OTUD5	Q96G74	571 aa		11.18	□□□□□ -0.62
CAST-240	ENST00000514055	GML	Q99445	158 aa		11.18	□□□□□ -0.62
CAST-240	ENST00000514055	EYA3	Q99504	573 aa		11.18	□□□□□ -0.62
CAST-240	ENST00000514055	MXD3	Q9BW11	206 aa		11.18	□□□□□ -0.62
CAST-240	ENST00000514055	MYH16	Q9H6N6	1097 aa		11.18	□□□□□ -0.62
CAST-240	ENST00000514055	PTPN22	Q9Y2R2	807 aa		11.18	□□□□□ -0.62
CAST-240	ENST00000514055	ELL2	O00472	640 aa	Predicted RBP	11.17	□□□□□ -0.62
CAST-240	ENST00000514055	GOLGA2	Q08379	1002 aa		11.17	□□□□□ -0.62
CAST-240	ENST00000514055	TCIRG1	Q13488	830 aa		11.17	□□□□□ -0.62
CAST-240	ENST00000514055	RTL5	Q5HYW3	569 aa	Predicted RBP	11.17	□□□□□ -0.62
CAST-240	ENST00000514055	HDGFL1	Q5TGJ6	251 aa		11.17	□□□□□ -0.62
CAST-240	ENST00000514055	COPS6	Q7L5N1	327 aa		11.17	□□□□□ -0.62
CAST-240	ENST00000514055	C8orf58	Q8NAV2	365 aa		11.17	□□□□□ -0.62
CAST-240	ENST00000514055	SLC17A8	Q8NDX2	589 aa		11.17	□□□□□ -0.62
CAST-240	ENST00000514055	ARMC5	Q96C12	935 aa		11.17	□□□□□ -0.62
CAST-240	ENST00000514055	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.17	□□□□□ -0.62
CAST-240	ENST00000514055	PITPNM2	Q9BZ72	1349 aa		11.16	□□□□□ -0.62
CAST-240	ENST00000514055	CACNA1F	O60840	1977 aa		11.16	□□□□□ -0.62
CAST-240	ENST00000514055	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
CAST-240	ENST00000514055	UFL1	O94874	794 aa		11.16	□□□□□ -0.62
CAST-240	ENST00000514055	USP17L8	P0C7I0	530 aa		11.16	□□□□□ -0.62
CAST-240	ENST00000514055	SPRYD7	Q5W111	196 aa		11.16	□□□□□ -0.62
CAST-240	ENST00000514055	CHRDL2	Q6WN34	429 aa		11.16	□□□□□ -0.62
CAST-240	ENST00000514055	AGBL3	Q8NEM8	1001 aa		11.16	□□□□□ -0.62
CAST-240	ENST00000514055	FAM89A	Q96GI7	184 aa		11.16	□□□□□ -0.62
CAST-240	ENST00000514055	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.16	□□□□□ -0.62
CAST-240	ENST00000514055	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.16	□□□□□ -0.62
CAST-240	ENST00000514055	DDX60	Q8IY21	1712 aa	Known RBP	11.15	□□□□□ -0.62
CAST-240	ENST00000514055	WTIP	A6NIX2	430 aa	Predicted RBP	11.15	□□□□□ -0.62
CAST-240	ENST00000514055		E9PSI1	815 aa		11.15	□□□□□ -0.62
CAST-240	ENST00000514055		G3V3G9	751 aa		11.15	□□□□□ -0.62
CAST-240	ENST00000514055	MYC	P01106	439 aa	Predicted RBP	11.15	□□□□□ -0.62
CAST-240	ENST00000514055	EXOSC9	Q06265	439 aa	Known RBP	11.15	□□□□□ -0.62
CAST-240	ENST00000514055	SF3B3	Q15393	1217 aa	Known RBP	11.15	□□□□□ -0.62
CAST-240	ENST00000514055	TWISTNB	Q3B726	338 aa	Predicted RBP	11.15	□□□□□ -0.62
CAST-240	ENST00000514055	HSP90AB3P	Q58FF7	597 aa		11.15	□□□□□ -0.62
CAST-240	ENST00000514055	DCAF8	Q5TAQ9	597 aa		11.15	□□□□□ -0.62
CAST-240	ENST00000514055	IFNL1	Q8IU54	200 aa		11.15	□□□□□ -0.62
CAST-240	ENST00000514055	TSPYL6	Q8N831	410 aa		11.15	□□□□□ -0.62
CAST-240	ENST00000514055	SEC31B	Q9NQW1	1179 aa		11.15	□□□□□ -0.62
CAST-240	ENST00000514055	RBM27	Q9P2N5	1060 aa	Known RBP	11.15	□□□□□ -0.62
CAST-240	ENST00000514055	ZNF609	O15014	1411 aa		11.15	□□□□□ -0.62
CAST-240	ENST00000514055	COL6A3	P12111	3177 aa		11.14	□□□□□ -0.63
CAST-240	ENST00000514055	ATP5J2-PTCD1	G3V325	749 aa		11.14	□□□□□ -0.63
CAST-240	ENST00000514055	SASH1	O94885	1247 aa		11.14	□□□□□ -0.63
CAST-240	ENST00000514055	RPS8	P62241	208 aa	Known RBP	11.14	□□□□□ -0.63
CAST-240	ENST00000514055	SLFN5	Q08AF3	891 aa		11.14	□□□□□ -0.63
CAST-240	ENST00000514055	ZNF333	Q96JL9	665 aa		11.14	□□□□□ -0.63
CAST-240	ENST00000514055	CLMN	Q96JQ2	1002 aa		11.14	□□□□□ -0.63
CAST-240	ENST00000514055	CHMP4A	Q9BY43	222 aa		11.14	□□□□□ -0.63
CAST-240	ENST00000514055	EFCC1	Q9HA90	598 aa		11.14	□□□□□ -0.63
CAST-240	ENST00000514055	CHPF2	Q9P2E5	772 aa		11.14	□□□□□ -0.63
CAST-240	ENST00000514055	ANGEL1	Q9UNK9	670 aa	Known RBP	11.14	□□□□□ -0.63
CAST-240	ENST00000514055	WNT10B	O00744	389 aa		11.13	□□□□□ -0.63
CAST-240	ENST00000514055	CRHR2	Q13324	411 aa		11.13	□□□□□ -0.63
CAST-240	ENST00000514055	LDLRAD1	Q5T700	205 aa		11.13	□□□□□ -0.63
CAST-240	ENST00000514055	CCDC30	Q5VVM6	783 aa		11.13	□□□□□ -0.63
CAST-240	ENST00000514055	ARMC9	Q7Z3E5	817 aa		11.13	□□□□□ -0.63
CAST-240	ENST00000514055	CDCA7L	Q96GN5	454 aa		11.13	□□□□□ -0.63
CAST-240	ENST00000514055	PODXL2	Q9NZ53	605 aa		11.13	□□□□□ -0.63
CAST-240	ENST00000514055	ANKIB1	Q9P2G1	1089 aa		11.13	□□□□□ -0.63
CAST-240	ENST00000514055	DBF4	Q9UBU7	674 aa	Predicted RBP	11.13	□□□□□ -0.63
CAST-240	ENST00000514055	GGA1	Q9UJY5	639 aa		11.13	□□□□□ -0.63
CAST-240	ENST00000514055	LAMA3	Q16787	3333 aa		11.13	□□□□□ -0.63
CAST-240	ENST00000514055	USP17L3	A6NCW0	530 aa		11.12	□□□□□ -0.63
CAST-240	ENST00000514055	USP17L4	A6NCW7	530 aa		11.12	□□□□□ -0.63
CAST-240	ENST00000514055	ALDH1A1	P00352	501 aa		11.12	□□□□□ -0.63
CAST-240	ENST00000514055	USP17L1	Q7RTZ2	530 aa		11.12	□□□□□ -0.63
CAST-240	ENST00000514055	ERO1A	Q96HE7	468 aa		11.12	□□□□□ -0.63
CAST-240	ENST00000514055	ISCA1	Q9BUE6	129 aa		11.12	□□□□□ -0.63
CAST-240	ENST00000514055	TMEM106C	Q9BVX2	250 aa		11.12	□□□□□ -0.63
CAST-240	ENST00000514055	PTCH2	Q9Y6C5	1203 aa		11.12	□□□□□ -0.63
CAST-240	ENST00000514055	ZBED9	Q6R2W3	1325 aa		11.11	□□□□□ -0.63
CAST-240	ENST00000514055	MANSC4	A6NHS7	340 aa	Predicted RBP	11.11	□□□□□ -0.63
CAST-240	ENST00000514055	NF2	P35240	595 aa		11.11	□□□□□ -0.63
CAST-240	ENST00000514055	GJA5	P36382	358 aa		11.11	□□□□□ -0.63
CAST-240	ENST00000514055	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.11	□□□□□ -0.63
CAST-240	ENST00000514055	FBXW7	Q969H0	707 aa		11.11	□□□□□ -0.63
CAST-240	ENST00000514055	WNK4	Q96J92	1243 aa		11.11	□□□□□ -0.63
CAST-240	ENST00000514055	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.11	□□□□□ -0.63
CAST-240	ENST00000514055	STK31	Q9BXU1	1019 aa		11.11	□□□□□ -0.63
CAST-240	ENST00000514055	HYPK	Q9NX55	129 aa		11.11	□□□□□ -0.63
CAST-240	ENST00000514055	IRS4	O14654	1257 aa	Predicted RBP	11.1	□□□□□ -0.63
CAST-240	ENST00000514055	VAMP4	O75379	141 aa		11.1	□□□□□ -0.63
CAST-240	ENST00000514055	SLC4A8	Q2Y0W8	1093 aa		11.1	□□□□□ -0.63
CAST-240	ENST00000514055	DACT2	Q5SW24	774 aa		11.1	□□□□□ -0.63
CAST-240	ENST00000514055	TRMT2A	Q8IZ69	625 aa	Known RBP	11.1	□□□□□ -0.63
CAST-240	ENST00000514055	SLC10A4	Q96EP9	437 aa		11.1	□□□□□ -0.63
CAST-240	ENST00000514055	PTPN18	Q99952	460 aa		11.1	□□□□□ -0.63
CAST-240	ENST00000514055	PSME4	Q14997	1843 aa		11.09	□□□□□ -0.63
CAST-240	ENST00000514055	SSC5D	A1L4H1	1573 aa		11.09	□□□□□ -0.63
CAST-240	ENST00000514055	SP3	Q02447	781 aa		11.09	□□□□□ -0.63
CAST-240	ENST00000514055	JARID2	Q92833	1246 aa	Predicted RBP	11.09	□□□□□ -0.63
CAST-240	ENST00000514055	SOX1	O00570	391 aa	Predicted RBP	11.08	□□□□□ -0.64
CAST-240	ENST00000514055	INHBE	P58166	350 aa		11.08	□□□□□ -0.64
CAST-240	ENST00000514055	SLC9C1	Q4G0N8	1177 aa		11.08	□□□□□ -0.64
CAST-240	ENST00000514055	PODN	Q7Z5L7	613 aa		11.08	□□□□□ -0.64
CAST-240	ENST00000514055	SH3TC2	Q8TF17	1288 aa		11.08	□□□□□ -0.64
CAST-240	ENST00000514055	PHAX	Q9H814	394 aa	Known RBP	11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms