RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ECHDC1Q9NTX5 307 aa12.08□□□□□ -0.48
TPM3-221ENST00000513769 NIP7Q9Y221 180 aaKnown RBP eCLIP12.08□□□□□ -0.48
TPM3-221ENST00000513769 SBF2Q86WG5 1849 aa12.08□□□□□ -0.48
TPM3-221ENST00000513769 ANKRD18BA2A2Z9 1011 aa12.07□□□□□ -0.48
TPM3-221ENST00000513769 RFC4P35249 363 aa12.07□□□□□ -0.48
TPM3-221ENST00000513769 SUSD4Q5VX71 490 aa12.07□□□□□ -0.48
TPM3-221ENST00000513769 ARHGEF1Q92888 912 aaKnown RBP12.07□□□□□ -0.48
TPM3-221ENST00000513769 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
TPM3-221ENST00000513769 ADAM33Q9BZ11 813 aa12.07□□□□□ -0.48
TPM3-221ENST00000513769 NUP98P52948 1817 aa12.07□□□□□ -0.48
TPM3-221ENST00000513769 SDSP20132 328 aa12.06□□□□□ -0.48
TPM3-221ENST00000513769 GPTP24298 496 aa12.06□□□□□ -0.48
TPM3-221ENST00000513769 SSFA2P28290 1259 aa12.06□□□□□ -0.48
TPM3-221ENST00000513769 SF3B3Q15393 1217 aaKnown RBP12.06□□□□□ -0.48
TPM3-221ENST00000513769 JARID2Q92833 1246 aaPredicted RBP12.06□□□□□ -0.48
TPM3-221ENST00000513769 DDRGK1Q96HY6 314 aa12.06□□□□□ -0.48
TPM3-221ENST00000513769 IL1RAPL2Q9NP60 686 aa12.06□□□□□ -0.48
TPM3-221ENST00000513769 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
TPM3-221ENST00000513769 PA2G4Q9UQ80 394 aaKnown RBP12.06□□□□□ -0.48
TPM3-221ENST00000513769 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
TPM3-221ENST00000513769 MYH14Q7Z406 1995 aaKnown RBP12.06□□□□□ -0.48
TPM3-221ENST00000513769 BTAF1O14981 1849 aa12.06□□□□□ -0.48
TPM3-221ENST00000513769 AFDNP55196 1824 aaKnown RBP12.06□□□□□ -0.48
TPM3-221ENST00000513769 LY75O60449 1722 aa12.06□□□□□ -0.48
TPM3-221ENST00000513769 RTL9Q8NET4 1388 aa12.05□□□□□ -0.48
TPM3-221ENST00000513769 GNPATO15228 680 aa12.05□□□□□ -0.48
TPM3-221ENST00000513769 GSPT1P15170 499 aaKnown RBP12.05□□□□□ -0.48
TPM3-221ENST00000513769 CTSWP56202 376 aa12.05□□□□□ -0.48
TPM3-221ENST00000513769 CCDC152Q4G0S7 254 aa12.05□□□□□ -0.48
TPM3-221ENST00000513769 ATG9AQ7Z3C6 839 aa12.05□□□□□ -0.48
TPM3-221ENST00000513769 EAF2Q96CJ1 260 aaPredicted RBP12.05□□□□□ -0.48
TPM3-221ENST00000513769 COL5A3P25940 1745 aaPredicted RBP12.05□□□□□ -0.48
TPM3-221ENST00000513769 HIP1O00291 1037 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 ATP5JP18859 108 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 TXNRD1Q16881 649 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 TNNI3KQ59H18 835 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 LDHAL6AQ6ZMR3 332 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
TPM3-221ENST00000513769 AACSQ86V21 672 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 CNTROBQ8N137 903 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 PI4K2BQ8TCG2 481 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 OTUD7AQ8TE49 926 aaPredicted RBP12.04□□□□□ -0.48
TPM3-221ENST00000513769 EVI5LQ96CN4 794 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 LRRC4BQ9NT99 713 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 CHMP3Q9Y3E7 222 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 RIPOR2Q9Y4F9 1068 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 FPGT-TNNI3KV9GXZ4 949 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 UBN2Q6ZU65 1347 aa12.04□□□□□ -0.48
TPM3-221ENST00000513769 DPYSL4O14531 572 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 REC8O95072 547 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 NTSR2O95665 410 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 ITGA6P23229 1130 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
TPM3-221ENST00000513769 RBM25P49756 843 aaKnown RBP12.03□□□□□ -0.48
TPM3-221ENST00000513769 TFCP2Q12800 502 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 TAF7LQ5H9L4 462 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 RTL5Q5HYW3 569 aaPredicted RBP12.03□□□□□ -0.48
TPM3-221ENST00000513769 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 TBC1D9Q6ZT07 1266 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.03□□□□□ -0.48
TPM3-221ENST00000513769 NLRP3Q96P20 1036 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 IPO9Q96P70 1041 aaKnown RBP12.03□□□□□ -0.48
TPM3-221ENST00000513769 PCDHGA10Q9Y5H3 936 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 MROH5Q6ZUA9 1318 aa12.03□□□□□ -0.48
TPM3-221ENST00000513769 RUFY2Q8WXA3 655 aa12.02□□□□□ -0.49
TPM3-221ENST00000513769 ZNF512BQ96KM6 892 aaPredicted RBP12.02□□□□□ -0.49
TPM3-221ENST00000513769 TBC1D32Q96NH3 1257 aa12.02□□□□□ -0.49
TPM3-221ENST00000513769 C22orf23Q9BZE7 217 aa12.02□□□□□ -0.49
TPM3-221ENST00000513769 SIL1Q9H173 461 aa12.02□□□□□ -0.49
TPM3-221ENST00000513769 ANKRD36CQ5JPF3 1778 aa12.01□□□□□ -0.49
TPM3-221ENST00000513769 TRIM6-TRIM34B2RNG4 842 aa12.01□□□□□ -0.49
TPM3-221ENST00000513769 TM4SF1P30408 202 aa12.01□□□□□ -0.49
TPM3-221ENST00000513769 KCNQ4P56696 695 aa12.01□□□□□ -0.49
TPM3-221ENST00000513769 NLGN1Q8N2Q7 840 aa12.01□□□□□ -0.49
TPM3-221ENST00000513769 KLHDC4Q8TBB5 520 aa12.01□□□□□ -0.49
TPM3-221ENST00000513769 CDC5LQ99459 802 aaKnown RBP12.01□□□□□ -0.49
TPM3-221ENST00000513769 SLC4A5Q9BY07 1137 aa12.01□□□□□ -0.49
TPM3-221ENST00000513769 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
TPM3-221ENST00000513769 PDE8BO95263 885 aa12□□□□□ -0.49
TPM3-221ENST00000513769 ZBTB7AO95365 584 aa12□□□□□ -0.49
TPM3-221ENST00000513769 CHMLP26374 656 aa12□□□□□ -0.49
TPM3-221ENST00000513769 LRRFIP1Q32MZ4 808 aaKnown RBP12□□□□□ -0.49
TPM3-221ENST00000513769 CCDC158Q5M9N0 1113 aa12□□□□□ -0.49
TPM3-221ENST00000513769 TBC1D9BQ66K14 1250 aa12□□□□□ -0.49
TPM3-221ENST00000513769 SYNE4Q8N205 404 aa12□□□□□ -0.49
TPM3-221ENST00000513769 RILPL2Q969X0 211 aa12□□□□□ -0.49
TPM3-221ENST00000513769 KCTD12Q96CX2 325 aaKnown RBP12□□□□□ -0.49
TPM3-221ENST00000513769 MPHOSPH8Q99549 860 aa12□□□□□ -0.49
TPM3-221ENST00000513769 ZBED2Q9BTP6 218 aa12□□□□□ -0.49
TPM3-221ENST00000513769 CCDC8Q9H0W5 538 aaPredicted RBP12□□□□□ -0.49
TPM3-221ENST00000513769 GREM2Q9H772 168 aa12□□□□□ -0.49
TPM3-221ENST00000513769 HCSTQ9UBK5 93 aa12□□□□□ -0.49
TPM3-221ENST00000513769 IGHMBP2P38935 993 aaKnown RBP11.99□□□□□ -0.49
TPM3-221ENST00000513769 LRRC24Q50LG9 513 aa11.99□□□□□ -0.49
TPM3-221ENST00000513769 NBPF5PQ86XG9 351 aaPredicted RBP11.99□□□□□ -0.49
TPM3-221ENST00000513769 USP26Q9BXU7 913 aa11.99□□□□□ -0.49
TPM3-221ENST00000513769 CNNM1Q9NRU3 951 aa11.99□□□□□ -0.49
TPM3-221ENST00000513769 BSDC1Q9NW68 430 aaPredicted RBP11.99□□□□□ -0.49
TPM3-221ENST00000513769 STK32BQ9NY57 414 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms