RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 MICALL2Q8IY33 904 aa22.25■■□□□ 1.15
DDR1-272ENST00000513243 KLHDC4Q8TBB5 520 aa22.25■■□□□ 1.15
DDR1-272ENST00000513243 H7C1D1 291 aa22.24■■□□□ 1.15
DDR1-272ENST00000513243 C15orf52Q6ZUT6 534 aaKnown RBP22.24■■□□□ 1.15
DDR1-272ENST00000513243 CNTROBQ8N137 903 aa22.24■■□□□ 1.15
DDR1-272ENST00000513243 LRRFIP2Q9Y608 721 aaKnown RBP22.24■■□□□ 1.15
DDR1-272ENST00000513243 A0A1B0GUL6 1792 aa22.23■■□□□ 1.15
DDR1-272ENST00000513243 USP17L3A6NCW0 530 aa22.23■■□□□ 1.15
DDR1-272ENST00000513243 USP17L4A6NCW7 530 aa22.23■■□□□ 1.15
DDR1-272ENST00000513243 RFX5P48382 616 aaPredicted RBP22.23■■□□□ 1.15
DDR1-272ENST00000513243 HIRAP54198 1017 aaPredicted RBP22.23■■□□□ 1.15
DDR1-272ENST00000513243 LRRC24Q50LG9 513 aa22.23■■□□□ 1.15
DDR1-272ENST00000513243 RSBN1LQ6PCB5 846 aaPredicted RBP22.23■■□□□ 1.15
DDR1-272ENST00000513243 USP17L1Q7RTZ2 530 aa22.23■■□□□ 1.15
DDR1-272ENST00000513243 TRPM4Q8TD43 1214 aa22.23■■□□□ 1.15
DDR1-272ENST00000513243 HDAC5Q9UQL6 1122 aa22.22■■□□□ 1.15
DDR1-272ENST00000513243 MROH5Q6ZUA9 1318 aa22.22■■□□□ 1.15
DDR1-272ENST00000513243 PASKQ96RG2 1323 aa22.22■■□□□ 1.15
DDR1-272ENST00000513243 SAMD7Q7Z3H4 446 aa22.21■■□□□ 1.15
DDR1-272ENST00000513243 TMEM57Q8N5G2 664 aa22.21■■□□□ 1.15
DDR1-272ENST00000513243 DNAJC5GQ8N7S2 189 aa22.21■■□□□ 1.15
DDR1-272ENST00000513243 AGBL3Q8NEM8 1001 aa22.21■■□□□ 1.15
DDR1-272ENST00000513243 GMLQ99445 158 aa22.21■■□□□ 1.15
DDR1-272ENST00000513243 CD209Q9NNX6 404 aa22.21■■□□□ 1.15
DDR1-272ENST00000513243 CEP350Q5VT06 3117 aa22.2■■□□□ 1.14
DDR1-272ENST00000513243 EGFRP00533 1210 aa22.2■■□□□ 1.14
DDR1-272ENST00000513243 GNAI3P08754 354 aa22.2■■□□□ 1.14
DDR1-272ENST00000513243 PTPN12Q05209 780 aaKnown RBP22.2■■□□□ 1.14
DDR1-272ENST00000513243 UBE4AQ14139 1066 aa22.2■■□□□ 1.14
DDR1-272ENST00000513243 DACT2Q5SW24 774 aa22.2■■□□□ 1.14
DDR1-272ENST00000513243 PGAP2Q9UHJ9 254 aa22.2■■□□□ 1.14
DDR1-272ENST00000513243 ZNF609O15014 1411 aa22.2■■□□□ 1.14
DDR1-272ENST00000513243 METTL24Q5JXM2 366 aa22.19■■□□□ 1.14
DDR1-272ENST00000513243 STRIP1Q5VSL9 837 aa22.19■■□□□ 1.14
DDR1-272ENST00000513243 MXD3Q9BW11 206 aa22.19■■□□□ 1.14
DDR1-272ENST00000513243 PSME4Q14997 1843 aa22.19■■□□□ 1.14
DDR1-272ENST00000513243 TBC1D10BQ4KMP7 808 aaPredicted RBP22.18■■□□□ 1.14
DDR1-272ENST00000513243 RBM26Q5T8P6 1007 aaKnown RBP22.18■■□□□ 1.14
DDR1-272ENST00000513243 TTLL5Q6EMB2 1281 aa22.18■■□□□ 1.14
DDR1-272ENST00000513243 VGLL2Q8N8G2 317 aa22.18■■□□□ 1.14
DDR1-272ENST00000513243 ZC3H15Q8WU90 426 aaKnown RBP22.18■■□□□ 1.14
DDR1-272ENST00000513243 FBXW7Q969H0 707 aa22.18■■□□□ 1.14
DDR1-272ENST00000513243 EYA2O00167 538 aa22.17■■□□□ 1.14
DDR1-272ENST00000513243 RLBP1P12271 317 aa22.17■■□□□ 1.14
DDR1-272ENST00000513243 ZNF280AP59817 542 aaPredicted RBP22.17■■□□□ 1.14
DDR1-272ENST00000513243 ZNF804AQ7Z570 1209 aa22.17■■□□□ 1.14
DDR1-272ENST00000513243 PDE8BO95263 885 aa22.16■■□□□ 1.14
DDR1-272ENST00000513243 USP17L8P0C7I0 530 aa22.16■■□□□ 1.14
DDR1-272ENST00000513243 IL1R1P14778 569 aa22.16■■□□□ 1.14
DDR1-272ENST00000513243 GTF2IP78347 998 aa22.16■■□□□ 1.14
DDR1-272ENST00000513243 DZIP1LQ8IYY4 767 aaKnown RBP22.16■■□□□ 1.14
DDR1-272ENST00000513243 GYG1P46976 350 aa22.15■■□□□ 1.14
DDR1-272ENST00000513243 FMR1Q06787 632 aaKnown RBP eCLIP22.15■■□□□ 1.14
DDR1-272ENST00000513243 KIF4BQ2VIQ3 1234 aa22.15■■□□□ 1.14
DDR1-272ENST00000513243 ATG9AQ7Z3C6 839 aa22.15■■□□□ 1.14
DDR1-272ENST00000513243 FTSJ3Q8IY81 847 aaKnown RBP22.15■■□□□ 1.14
DDR1-272ENST00000513243 FAM84BQ96KN1 310 aaPredicted RBP22.15■■□□□ 1.14
DDR1-272ENST00000513243 CREBZFQ9NS37 354 aa22.15■■□□□ 1.14
DDR1-272ENST00000513243 ZNF646O15015 1829 aaPredicted RBP22.15■■□□□ 1.14
DDR1-272ENST00000513243 TRAF5O00463 557 aa22.14■■□□□ 1.13
DDR1-272ENST00000513243 GNAI2P04899 355 aa22.14■■□□□ 1.13
DDR1-272ENST00000513243 SIL1Q9H173 461 aa22.14■■□□□ 1.13
DDR1-272ENST00000513243 PA2G4Q9UQ80 394 aaKnown RBP22.14■■□□□ 1.13
DDR1-272ENST00000513243 MYO3BQ8WXR4 1341 aa22.13■■□□□ 1.13
DDR1-272ENST00000513243 CIAO1O76071 339 aa22.13■■□□□ 1.13
DDR1-272ENST00000513243 HIBADHP31937 336 aaKnown RBP22.13■■□□□ 1.13
DDR1-272ENST00000513243 MTX1Q13505 466 aa22.13■■□□□ 1.13
DDR1-272ENST00000513243 GLIS2Q9BZE0 524 aaPredicted RBP22.13■■□□□ 1.13
DDR1-272ENST00000513243 FBXO3Q9UK99 471 aa22.13■■□□□ 1.13
DDR1-272ENST00000513243 TMEM88BA6NKF7 163 aa22.12■■□□□ 1.13
DDR1-272ENST00000513243 SRGAP3O43295 1099 aa22.12■■□□□ 1.13
DDR1-272ENST00000513243 TDRD7Q8NHU6 1098 aaKnown RBP22.12■■□□□ 1.13
DDR1-272ENST00000513243 KLRG1Q96E93 195 aa22.12■■□□□ 1.13
DDR1-272ENST00000513243 MYOZ2Q9NPC6 264 aa22.12■■□□□ 1.13
DDR1-272ENST00000513243 COPRSQ9NQ92 184 aa22.12■■□□□ 1.13
DDR1-272ENST00000513243 FGFR2P21802 821 aa22.11■■□□□ 1.13
DDR1-272ENST00000513243 PUM3Q15397 648 aaKnown RBP22.11■■□□□ 1.13
DDR1-272ENST00000513243 CDC37L1Q7L3B6 337 aa22.11■■□□□ 1.13
DDR1-272ENST00000513243 FBXO33Q7Z6M2 555 aa22.11■■□□□ 1.13
DDR1-272ENST00000513243 ITPRIPQ8IWB1 547 aa22.11■■□□□ 1.13
DDR1-272ENST00000513243 CERS5Q8N5B7 392 aa22.11■■□□□ 1.13
DDR1-272ENST00000513243 RCAN3Q9UKA8 241 aa22.11■■□□□ 1.13
DDR1-272ENST00000513243 ASTN2O75129 1339 aaPredicted RBP22.1■■□□□ 1.13
DDR1-272ENST00000513243 SASH1O94885 1247 aa22.1■■□□□ 1.13
DDR1-272ENST00000513243 KIAA0825Q8IV33 1275 aa22.1■■□□□ 1.13
DDR1-272ENST00000513243 OGFOD1Q8N543 542 aa22.1■■□□□ 1.13
DDR1-272ENST00000513243 PANK1Q8TE04 598 aa22.1■■□□□ 1.13
DDR1-272ENST00000513243 JAG2Q9Y219 1238 aa22.1■■□□□ 1.13
DDR1-272ENST00000513243 ZBTB7BO15156 539 aaPredicted RBP22.09■■□□□ 1.13
DDR1-272ENST00000513243 SCARF1Q14162 830 aa22.09■■□□□ 1.13
DDR1-272ENST00000513243 CST9Q5W186 159 aa22.09■■□□□ 1.13
DDR1-272ENST00000513243 USP48Q86UV5 1035 aa22.09■■□□□ 1.13
DDR1-272ENST00000513243 CEP126Q9P2H0 1117 aa22.09■■□□□ 1.13
DDR1-272ENST00000513243 FAM205AQ6ZU69 1335 aa22.08■■□□□ 1.13
DDR1-272ENST00000513243 PNMA6EA0A0J9YXQ4 647 aa22.08■■□□□ 1.13
DDR1-272ENST00000513243 IFIT1P09914 478 aaKnown RBP22.08■■□□□ 1.13
DDR1-272ENST00000513243 IL15P40933 162 aaPredicted RBP22.08■■□□□ 1.13
DDR1-272ENST00000513243 CAVIN4Q5BKX8 364 aa22.08■■□□□ 1.13
DDR1-272ENST00000513243 DLK2Q6UY11 383 aa22.08■■□□□ 1.13
DDR1-272ENST00000513243 VPS37DQ86XT2 251 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms