RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 MZF1P28698 734 aaPredicted RBP4.3□□□□□ -1.72
SMN1-208ENST00000513228 SOX18P35713 384 aa4.3□□□□□ -1.72
SMN1-208ENST00000513228 IREB2P48200 963 aaKnown RBP4.3□□□□□ -1.72
SMN1-208ENST00000513228 PDE4CQ08493 712 aa4.3□□□□□ -1.72
SMN1-208ENST00000513228 COL9A3Q14050 684 aaPredicted RBP4.3□□□□□ -1.72
SMN1-208ENST00000513228 PRSS36Q5K4E3 855 aa4.3□□□□□ -1.72
SMN1-208ENST00000513228 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
SMN1-208ENST00000513228 PDE12Q6L8Q7 609 aaKnown RBP4.3□□□□□ -1.72
SMN1-208ENST00000513228 TXNDC11Q6PKC3 985 aa4.3□□□□□ -1.72
SMN1-208ENST00000513228 TXNRD3Q86VQ6 643 aa4.3□□□□□ -1.72
SMN1-208ENST00000513228 FBXO11Q86XK2 927 aa4.3□□□□□ -1.72
SMN1-208ENST00000513228 LENG1Q96BZ8 264 aaPredicted RBP4.3□□□□□ -1.72
SMN1-208ENST00000513228 RASSF4Q9H2L5 321 aa4.3□□□□□ -1.72
SMN1-208ENST00000513228 TUT1Q9H6E5 874 aaKnown RBP4.3□□□□□ -1.72
SMN1-208ENST00000513228 TMEM63CQ9P1W3 806 aa4.3□□□□□ -1.72
SMN1-208ENST00000513228 SELPP16109 830 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 GLB1P16278 677 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 PTPRAP18433 802 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 CDC27P30260 824 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 FKBP4Q02790 459 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMN1-208ENST00000513228 SF3B2Q13435 895 aaKnown RBP4.29□□□□□ -1.72
SMN1-208ENST00000513228 MBTPS1Q14703 1052 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 COL13A1Q5TAT6 717 aaPredicted RBP4.29□□□□□ -1.72
SMN1-208ENST00000513228 DTWD1Q8N5C7 304 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 C1orf127Q8N9H9 656 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 DCAF11Q8TEB1 546 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 SLC7A3Q8WY07 619 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 PMEPA1Q969W9 287 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 CARD10Q9BWT7 1032 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 MUC3BQ9H195 1237 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 TPSG1Q9NRR2 321 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 BRPF3Q9ULD4 1205 aa4.29□□□□□ -1.72
SMN1-208ENST00000513228 USP5P45974 858 aa4.28□□□□□ -1.72
SMN1-208ENST00000513228 EHHADHQ08426 723 aa4.28□□□□□ -1.72
SMN1-208ENST00000513228 IGF2-ASQ6U949 168 aa4.28□□□□□ -1.72
SMN1-208ENST00000513228 ASAP3Q8TDY4 903 aa4.28□□□□□ -1.72
SMN1-208ENST00000513228 WFDC12Q8WWY7 111 aa4.28□□□□□ -1.72
SMN1-208ENST00000513228 TTC9Q92623 222 aa4.28□□□□□ -1.72
SMN1-208ENST00000513228 PBX4Q9BYU1 374 aa4.28□□□□□ -1.72
SMN1-208ENST00000513228 GGNBP2Q9H3C7 697 aa4.28□□□□□ -1.72
SMN1-208ENST00000513228 CNTN3Q9P232 1028 aa4.28□□□□□ -1.72
SMN1-208ENST00000513228 USTQ9Y2C2 406 aa4.28□□□□□ -1.72
SMN1-208ENST00000513228 NDUFB5O43674 189 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 TRPA1O75762 1119 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 ALX3O95076 343 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 SERPINB4P48594 390 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 ARL4DP49703 201 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 ADGRE1Q14246 886 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 GRIK5Q16478 980 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 ACAD11Q709F0 780 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 MAP4K3Q8IVH8 894 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 CACTIN-AS1Q8N1I8 211 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 RETREG2Q8NC44 543 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 MRPL18Q9H0U6 180 aaKnown RBP4.27□□□□□ -1.73
SMN1-208ENST00000513228 AKTIPQ9H8T0 292 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 SH2B1Q9NRF2 756 aaPredicted RBP4.27□□□□□ -1.73
SMN1-208ENST00000513228 CCDC87Q9NVE4 849 aa4.27□□□□□ -1.73
SMN1-208ENST00000513228 BIN2Q9UBW5 565 aaPredicted RBP4.27□□□□□ -1.73
SMN1-208ENST00000513228 PDE2AO00408 941 aaPredicted RBP4.26□□□□□ -1.73
SMN1-208ENST00000513228 SART1O43290 800 aaKnown RBP4.26□□□□□ -1.73
SMN1-208ENST00000513228 DEAF1O75398 565 aaPredicted RBP4.26□□□□□ -1.73
SMN1-208ENST00000513228 EDN3P14138 238 aa4.26□□□□□ -1.73
SMN1-208ENST00000513228 CD68P34810 354 aaPredicted RBP4.26□□□□□ -1.73
SMN1-208ENST00000513228 DUOXA2Q1HG44 320 aa4.26□□□□□ -1.73
SMN1-208ENST00000513228 AGGF1Q8N302 714 aaeCLIP4.26□□□□□ -1.73
SMN1-208ENST00000513228 SNX29Q8TEQ0 813 aa4.26□□□□□ -1.73
SMN1-208ENST00000513228 OSMRQ99650 979 aa4.26□□□□□ -1.73
SMN1-208ENST00000513228 FOXD3Q9UJU5 478 aaPredicted RBP4.26□□□□□ -1.73
SMN1-208ENST00000513228 RNF114Q9Y508 228 aa4.26□□□□□ -1.73
SMN1-208ENST00000513228 FSCN2O14926 492 aa4.25□□□□□ -1.73
SMN1-208ENST00000513228 EREGO14944 169 aa4.25□□□□□ -1.73
SMN1-208ENST00000513228 TNFRSF21O75509 655 aa4.25□□□□□ -1.73
SMN1-208ENST00000513228 POLR3DP05423 398 aaPredicted RBP4.25□□□□□ -1.73
SMN1-208ENST00000513228 ACPPP15309 386 aa4.25□□□□□ -1.73
SMN1-208ENST00000513228 NOS3P29474 1203 aa4.25□□□□□ -1.73
SMN1-208ENST00000513228 NLRP12P59046 1061 aa4.25□□□□□ -1.73
SMN1-208ENST00000513228 SETDB1Q15047 1291 aa4.25□□□□□ -1.73
SMN1-208ENST00000513228 POP1Q99575 1024 aaKnown RBP4.25□□□□□ -1.73
SMN1-208ENST00000513228 SRA1Q9HD15 236 aaKnown RBP4.25□□□□□ -1.73
SMN1-208ENST00000513228 SEC31BQ9NQW1 1179 aa4.25□□□□□ -1.73
SMN1-208ENST00000513228 AMOTL2Q9Y2J4 779 aa4.25□□□□□ -1.73
SMN1-208ENST00000513228 DLL1O00548 723 aa4.24□□□□□ -1.73
SMN1-208ENST00000513228 ICMTO60725 284 aa4.24□□□□□ -1.73
SMN1-208ENST00000513228 NEFLP07196 543 aa4.24□□□□□ -1.73
SMN1-208ENST00000513228 HOXD8P13378 290 aaPredicted RBP4.24□□□□□ -1.73
SMN1-208ENST00000513228 EPHA1P21709 976 aa4.24□□□□□ -1.73
SMN1-208ENST00000513228 PHLDB3Q6NSJ2 640 aa4.24□□□□□ -1.73
SMN1-208ENST00000513228 CEP120Q8N960 986 aa4.24□□□□□ -1.73
SMN1-208ENST00000513228 USP26Q9BXU7 913 aa4.24□□□□□ -1.73
SMN1-208ENST00000513228 H3BRJ5 948 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 DDX3YO15523 660 aaKnown RBP4.23□□□□□ -1.73
SMN1-208ENST00000513228 FZD6O60353 706 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 KIF4AO95239 1232 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 PDE3BQ13370 1112 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 IKBKEQ14164 716 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 FDX2Q6P4F2 183 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 XKR5Q6UX68 686 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 KLHL23Q8NBE8 558 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 GALNT11Q8NCW6 608 aa4.23□□□□□ -1.73
SMN1-208ENST00000513228 HHIPQ96QV1 700 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms