RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 UBXN1Q04323 297 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 ATRIPQ8WXE1 791 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 MAGEB6P1A0A0J9YX57 407 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 NAA16Q6N069 864 aaPredicted RBP19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 TTC12Q9H892 705 aaPredicted RBP19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 CNNM2Q9H8M5 875 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 WWC3Q9ULE0 1092 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 MIGA1Q8NAN2 632 aa19.71■□□□□ 0.75
ARHGEF28-212ENST00000513042 IDI1Q13907 227 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 HDAC1Q13547 482 aaPredicted RBP19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 LMBR1LQ6UX01 489 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 PLCD3Q8N3E9 789 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 MRPL50Q8N5N7 158 aaKnown RBP19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 ARFGAP3Q9NP61 516 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 LZTFL1Q9NQ48 299 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 PAG1Q9NWQ8 432 aa19.7■□□□□ 0.74
ARHGEF28-212ENST00000513042 CCDC6Q16204 474 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 C8orf58Q8NAV2 365 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 FAM200AQ8TCP9 573 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 GUCA1BQ9UMX6 200 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 MSL1Q68DK7 614 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 NSRP1Q9H0G5 558 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 TNNQ9UQP3 1299 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 TACC1O75410 805 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 GRM1Q13255 1194 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 DNAJC21Q5F1R6 531 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 JAG2Q9Y219 1238 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 NCOA1Q15788 1441 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 NSD2O96028 1365 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 DHX29Q7Z478 1369 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 UTP14AQ9BVJ6 771 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 PSMA7O14818 248 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 KRT2P35908 639 aa19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 DDX23Q9BUQ8 820 aaKnown RBP19.69■□□□□ 0.74
ARHGEF28-212ENST00000513042 PRIM1P49642 420 aaKnown RBP19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 VTI1AQ96AJ9 217 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 MPHOSPH6Q99547 160 aaKnown RBP19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 HMGB2P26583 209 aaKnown RBP19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 IQGAP2Q13576 1575 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 CAVIN2O95810 425 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 RHOXF2BP0C7M4 288 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 MAGEB6Q8N7X4 407 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 IFT81Q8WYA0 676 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 RHOXF2Q9BQY4 288 aa19.68■□□□□ 0.74
ARHGEF28-212ENST00000513042 SPTLC2O15270 562 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 TYRO3Q06418 890 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 SREK1Q8WXA9 508 aaKnown RBP19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 XRCC6P12956 609 aaKnown RBP eCLIP19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 GRM8O00222 908 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 ZFYP08048 801 aaPredicted RBP19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 AK2P54819 239 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 PLVAPQ9BX97 442 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 FAM13AO94988 1023 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 ZNF569Q5MCW4 686 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 GOLGA1Q92805 767 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 VPS18Q9P253 973 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 IL16Q14005 1332 aa19.67■□□□□ 0.74
ARHGEF28-212ENST00000513042 ANKRD36BQ8N2N9 1353 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 TIGD1Q96MW7 591 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 CCDC129Q6ZRS4 1044 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 TMTC2Q8N394 836 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 HELBQ8NG08 1087 aaPredicted RBP19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 TNNI2P48788 182 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 ATP8B2P98198 1209 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 BMP15O95972 392 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 ZKSCAN3Q9BRR0 538 aa19.66■□□□□ 0.74
ARHGEF28-212ENST00000513042 CCDC160A6NGH7 325 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 RRP36Q96EU6 259 aaKnown RBP19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 PLCB3Q01970 1234 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 NIP7Q9Y221 180 aaKnown RBP eCLIP19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 OPA1O60313 960 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 SPATA24Q86W54 205 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 CCDC25Q86WR0 208 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 VEZTQ9HBM0 779 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 IFNKQ9P0W0 207 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 TFCP2Q12800 502 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 ZCRB1Q8TBF4 217 aaKnown RBP19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 TCHPQ9BT92 498 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 C6orf50Q9HD87 102 aa19.65■□□□□ 0.74
ARHGEF28-212ENST00000513042 SYT10Q6XYQ8 523 aa19.64■□□□□ 0.74
ARHGEF28-212ENST00000513042 MICALL1Q8N3F8 863 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 NEK11Q8NG66 645 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 DDX12PQ92771 950 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 ZGPATQ8N5A5 531 aaKnown RBP19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 TRIM75PA6NK02 468 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 USP37Q86T82 979 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 ANKRD44Q8N8A2 993 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 PPP1R9BQ96SB3 815 aa19.64■□□□□ 0.73
ARHGEF28-212ENST00000513042 RIMBP2O15034 1052 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 PSMC4P43686 418 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 SP4Q02446 784 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 KIF5AQ12840 1032 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 RBM26Q5T8P6 1007 aaKnown RBP19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 CREB3L3Q68CJ9 461 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 ZNF804AQ7Z570 1209 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 RTL9Q8NET4 1388 aa19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 RNF113AO15541 343 aaKnown RBP19.63■□□□□ 0.73
ARHGEF28-212ENST00000513042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.63■□□□□ 0.731e-8■■□□□ 13.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms