RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 RFX1P22670 979 aa12.38□□□□□ -0.43
TRIO-220ENST00000512979 RIPK4P57078 832 aa12.38□□□□□ -0.43
TRIO-220ENST00000512979 PRPF40BQ6NWY9 871 aaKnown RBP12.38□□□□□ -0.43
TRIO-220ENST00000512979 PBXIP1Q96AQ6 731 aa12.38□□□□□ -0.43
TRIO-220ENST00000512979 TAOK3Q9H2K8 898 aa12.38□□□□□ -0.43
TRIO-220ENST00000512979 RRP7AQ9Y3A4 280 aaKnown RBP12.38□□□□□ -0.43
TRIO-220ENST00000512979 MYL6BP14649 208 aa12.37□□□□□ -0.43
TRIO-220ENST00000512979 SLC4A3P48751 1232 aa12.37□□□□□ -0.43
TRIO-220ENST00000512979 GRIPAP1Q4V328 841 aa12.37□□□□□ -0.43
TRIO-220ENST00000512979 SOGA3Q5TF21 947 aa12.37□□□□□ -0.43
TRIO-220ENST00000512979 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
TRIO-220ENST00000512979 EPS8L1Q8TE68 723 aa12.37□□□□□ -0.43
TRIO-220ENST00000512979 TSPYL4Q9UJ04 414 aa12.37□□□□□ -0.43
TRIO-220ENST00000512979 LAMB4A4D0S4 1761 aa12.37□□□□□ -0.43
TRIO-220ENST00000512979 KDM3BQ7LBC6 1761 aa12.37□□□□□ -0.43
TRIO-220ENST00000512979 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
TRIO-220ENST00000512979 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.36□□□□□ -0.43
TRIO-220ENST00000512979 ERVV-1B6SEH8 477 aa12.36□□□□□ -0.43
TRIO-220ENST00000512979 NPR1P16066 1061 aa12.36□□□□□ -0.43
TRIO-220ENST00000512979 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
TRIO-220ENST00000512979 FSTL1Q12841 308 aa12.36□□□□□ -0.43
TRIO-220ENST00000512979 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
TRIO-220ENST00000512979 TTLL7Q6ZT98 887 aa12.36□□□□□ -0.43
TRIO-220ENST00000512979 MAP3K15Q6ZN16 1313 aa12.36□□□□□ -0.43
TRIO-220ENST00000512979 LTBP3Q9NS15 1303 aa12.36□□□□□ -0.43
TRIO-220ENST00000512979 CEP350Q5VT06 3117 aa12.35□□□□□ -0.43
TRIO-220ENST00000512979 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
TRIO-220ENST00000512979 KLRG2A4D1S0 409 aaPredicted RBP12.35□□□□□ -0.43
TRIO-220ENST00000512979 CFHP08603 1231 aa12.35□□□□□ -0.43
TRIO-220ENST00000512979 VEGFAP15692 232 aaPredicted RBP12.35□□□□□ -0.43
TRIO-220ENST00000512979 TMPOP42166 694 aaKnown RBP12.35□□□□□ -0.43
TRIO-220ENST00000512979 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
TRIO-220ENST00000512979 SLF2Q8IX21 1173 aa12.35□□□□□ -0.43
TRIO-220ENST00000512979 SMC1BQ8NDV3 1235 aa12.35□□□□□ -0.43
TRIO-220ENST00000512979 SYMPKQ92797 1274 aaKnown RBP12.35□□□□□ -0.43
TRIO-220ENST00000512979 SLX4Q8IY92 1834 aa12.34□□□□□ -0.43
TRIO-220ENST00000512979 TIAM2Q8IVF5 1701 aa12.34□□□□□ -0.43
TRIO-220ENST00000512979 ARHGAP33O14559 1287 aa12.34□□□□□ -0.43
TRIO-220ENST00000512979 EIF2S2P20042 333 aaKnown RBP12.34□□□□□ -0.43
TRIO-220ENST00000512979 PDE4CQ08493 712 aa12.34□□□□□ -0.43
TRIO-220ENST00000512979 CCDC93Q567U6 631 aa12.34□□□□□ -0.43
TRIO-220ENST00000512979 CCDC146Q8IYE0 955 aa12.34□□□□□ -0.43
TRIO-220ENST00000512979 C7orf43Q8WVR3 580 aa12.34□□□□□ -0.43
TRIO-220ENST00000512979 PPP1R12CQ9BZL4 782 aa12.34□□□□□ -0.43
TRIO-220ENST00000512979 NYXQ9GZU5 481 aa12.34□□□□□ -0.43
TRIO-220ENST00000512979 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
TRIO-220ENST00000512979 ABCC12Q96J65 1359 aa12.33□□□□□ -0.44
TRIO-220ENST00000512979 GPTP24298 496 aa12.33□□□□□ -0.44
TRIO-220ENST00000512979 HTRA3P83110 453 aa12.33□□□□□ -0.44
TRIO-220ENST00000512979 SAMD7Q7Z3H4 446 aa12.33□□□□□ -0.44
TRIO-220ENST00000512979 SLC4A5Q9BY07 1137 aa12.33□□□□□ -0.44
TRIO-220ENST00000512979 ALG2Q9H553 416 aa12.33□□□□□ -0.44
TRIO-220ENST00000512979 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
TRIO-220ENST00000512979 FER1L6Q2WGJ9 1857 aa12.33□□□□□ -0.44
TRIO-220ENST00000512979 CCDC88AQ3V6T2 1871 aa12.32□□□□□ -0.44
TRIO-220ENST00000512979 ALDH1B1P30837 517 aa12.32□□□□□ -0.44
TRIO-220ENST00000512979 WDR43Q15061 677 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRIO-220ENST00000512979 DMRTA1Q5VZB9 504 aa12.32□□□□□ -0.44
TRIO-220ENST00000512979 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
TRIO-220ENST00000512979 OLFM4Q6UX06 510 aa12.32□□□□□ -0.44
TRIO-220ENST00000512979 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
TRIO-220ENST00000512979 PRR7Q8TB68 274 aa12.32□□□□□ -0.44
TRIO-220ENST00000512979 UBN2Q6ZU65 1347 aa12.32□□□□□ -0.44
TRIO-220ENST00000512979 CACNA1SQ13698 1873 aa12.31□□□□□ -0.44
TRIO-220ENST00000512979 ARFGEF2Q9Y6D5 1785 aa12.31□□□□□ -0.44
TRIO-220ENST00000512979 POTECB2RU33 542 aa12.31□□□□□ -0.44
TRIO-220ENST00000512979 RNF40O75150 1001 aa12.31□□□□□ -0.44
TRIO-220ENST00000512979 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRIO-220ENST00000512979 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
TRIO-220ENST00000512979 SUSD4Q5VX71 490 aa12.31□□□□□ -0.44
TRIO-220ENST00000512979 RUNDC1Q96C34 613 aa12.31□□□□□ -0.44
TRIO-220ENST00000512979 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
TRIO-220ENST00000512979 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
TRIO-220ENST00000512979 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
TRIO-220ENST00000512979 ANXA1P04083 346 aa12.3□□□□□ -0.44
TRIO-220ENST00000512979 NR6A1Q15406 480 aa12.3□□□□□ -0.44
TRIO-220ENST00000512979 CRY2Q49AN0 593 aa12.3□□□□□ -0.44
TRIO-220ENST00000512979 LRP10Q7Z4F1 713 aa12.3□□□□□ -0.44
TRIO-220ENST00000512979 ZNF34Q8IZ26 560 aa12.3□□□□□ -0.44
TRIO-220ENST00000512979 RTKN2Q8IZC4 609 aa12.3□□□□□ -0.44
TRIO-220ENST00000512979 ZNF277Q9NRM2 450 aaPredicted RBP12.3□□□□□ -0.44
TRIO-220ENST00000512979 LAS1LQ9Y4W2 734 aaKnown RBP12.3□□□□□ -0.44
TRIO-220ENST00000512979 WDR90Q96KV7 1748 aa12.29□□□□□ -0.44
TRIO-220ENST00000512979 PALM3A6NDB9 673 aaPredicted RBP12.29□□□□□ -0.44
TRIO-220ENST00000512979 NTSR2O95665 410 aa12.29□□□□□ -0.44
TRIO-220ENST00000512979 PARP10Q53GL7 1025 aa12.29□□□□□ -0.44
TRIO-220ENST00000512979 PPP1R42Q7Z4L9 355 aa12.29□□□□□ -0.44
TRIO-220ENST00000512979 RPGRQ92834 1020 aaKnown RBP12.29□□□□□ -0.44
TRIO-220ENST00000512979 ADAMTS8Q9UP79 889 aa12.29□□□□□ -0.44
TRIO-220ENST00000512979 NUP98P52948 1817 aa12.29□□□□□ -0.44
TRIO-220ENST00000512979 DICER1Q9UPY3 1922 aaKnown RBP12.29□□□□□ -0.44
TRIO-220ENST00000512979 CHL1O00533 1208 aa12.28□□□□□ -0.44
TRIO-220ENST00000512979 KRT24Q2M2I5 525 aa12.28□□□□□ -0.44
TRIO-220ENST00000512979 VARS2Q5ST30 1063 aaKnown RBP12.28□□□□□ -0.44
TRIO-220ENST00000512979 SYNE4Q8N205 404 aa12.28□□□□□ -0.44
TRIO-220ENST00000512979 KLRG1Q96E93 195 aa12.28□□□□□ -0.44
TRIO-220ENST00000512979 PRKRIP1Q9H875 184 aaPredicted RBP12.28□□□□□ -0.44
TRIO-220ENST00000512979 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
TRIO-220ENST00000512979 LMOD1P29536 600 aaPredicted RBP12.27□□□□□ -0.45
TRIO-220ENST00000512979 HOXA10P31260 410 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms