RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 DZANK1Q9NVP4 752 aa9.44□□□□□ -0.9
CHD1-209ENST00000512844 TRIM33Q9UPN9 1127 aa9.44□□□□□ -0.9
CHD1-209ENST00000512844 ANKRD33BA6NCL7 494 aa9.43□□□□□ -0.9
CHD1-209ENST00000512844 NID1P14543 1247 aa9.43□□□□□ -0.9
CHD1-209ENST00000512844 HOXB4P17483 251 aaPredicted RBP9.43□□□□□ -0.9
CHD1-209ENST00000512844 CDC27P30260 824 aa9.43□□□□□ -0.9
CHD1-209ENST00000512844 USPL1Q5W0Q7 1092 aa9.43□□□□□ -0.9
CHD1-209ENST00000512844 DMRTC2Q8IXT2 367 aaPredicted RBP9.43□□□□□ -0.9
CHD1-209ENST00000512844 ZKSCAN3Q9BRR0 538 aa9.43□□□□□ -0.9
CHD1-209ENST00000512844 EHD4Q9H223 541 aa9.43□□□□□ -0.9
CHD1-209ENST00000512844 NPHS2Q9NP85 383 aa9.43□□□□□ -0.9
CHD1-209ENST00000512844 PPP4R2Q9NY27 417 aa9.43□□□□□ -0.9
CHD1-209ENST00000512844 DSC3Q14574 896 aa9.42□□□□□ -0.9
CHD1-209ENST00000512844 ALG1LQ6GMV1 187 aa9.42□□□□□ -0.9
CHD1-209ENST00000512844 TMEM102Q8N9M5 508 aaPredicted RBP9.42□□□□□ -0.9
CHD1-209ENST00000512844 ASAP3Q8TDY4 903 aa9.42□□□□□ -0.9
CHD1-209ENST00000512844 TRIM11Q96F44 468 aa9.42□□□□□ -0.9
CHD1-209ENST00000512844 LATS2Q9NRM7 1088 aa9.42□□□□□ -0.9
CHD1-209ENST00000512844 IGHA2P01877 340 aa9.41□□□□□ -0.9
CHD1-209ENST00000512844 ACPPP15309 386 aa9.41□□□□□ -0.9
CHD1-209ENST00000512844 FMR1Q06787 632 aaKnown RBP eCLIP9.41□□□□□ -0.9
CHD1-209ENST00000512844 ENOX2Q16206 610 aaKnown RBP9.41□□□□□ -0.9
CHD1-209ENST00000512844 LIN7BQ9HAP6 207 aa9.41□□□□□ -0.9
CHD1-209ENST00000512844 TRAK1Q9UPV9 953 aa9.41□□□□□ -0.9
CHD1-209ENST00000512844 PPME1Q9Y570 386 aa9.41□□□□□ -0.9
CHD1-209ENST00000512844 APBA3O96018 575 aa9.4□□□□□ -0.9
CHD1-209ENST00000512844 SPATA31C1P0DKV0 1188 aa9.4□□□□□ -0.9
CHD1-209ENST00000512844 TRIM26Q12899 539 aaPredicted RBP9.4□□□□□ -0.9
CHD1-209ENST00000512844 EAPPQ56P03 285 aaPredicted RBP9.4□□□□□ -0.9
CHD1-209ENST00000512844 DTWD1Q8N5C7 304 aa9.4□□□□□ -0.9
CHD1-209ENST00000512844 FBF1Q8TES7 1133 aa9.4□□□□□ -0.9
CHD1-209ENST00000512844 POP1Q99575 1024 aaKnown RBP9.4□□□□□ -0.9
CHD1-209ENST00000512844 BCL11AQ9H165 835 aa9.4□□□□□ -0.9
CHD1-209ENST00000512844 SUV39H2Q9H5I1 410 aa9.4□□□□□ -0.9
CHD1-209ENST00000512844 SRA1Q9HD15 236 aaKnown RBP9.4□□□□□ -0.9
CHD1-209ENST00000512844 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.4□□□□□ -0.9
CHD1-209ENST00000512844 A0A1W2PP55 124 aa9.39□□□□□ -0.91
CHD1-209ENST00000512844 TRPA1O75762 1119 aa9.39□□□□□ -0.91
CHD1-209ENST00000512844 COL19A1Q14993 1142 aa9.39□□□□□ -0.91
CHD1-209ENST00000512844 GRIK5Q16478 980 aa9.39□□□□□ -0.91
CHD1-209ENST00000512844 MAP4K3Q8IVH8 894 aa9.39□□□□□ -0.91
CHD1-209ENST00000512844 BSNDQ8WZ55 320 aa9.39□□□□□ -0.91
CHD1-209ENST00000512844 LDHBP07195 334 aaKnown RBP9.38□□□□□ -0.91
CHD1-209ENST00000512844 P4HBP07237 508 aaKnown RBP9.38□□□□□ -0.91
CHD1-209ENST00000512844 CDC25BP30305 580 aa9.38□□□□□ -0.91
CHD1-209ENST00000512844 ARL4DP49703 201 aa9.38□□□□□ -0.91
CHD1-209ENST00000512844 KCNMA1Q12791 1236 aa9.38□□□□□ -0.91
CHD1-209ENST00000512844 KIAA0319Q5VV43 1072 aa9.38□□□□□ -0.91
CHD1-209ENST00000512844 PEAR1Q5VY43 1037 aaPredicted RBP9.38□□□□□ -0.91
CHD1-209ENST00000512844 NXPE3Q969Y0 559 aa9.38□□□□□ -0.91
CHD1-209ENST00000512844 NACC1Q96RE7 527 aa9.38□□□□□ -0.91
CHD1-209ENST00000512844 A0A0A0MRY4 1105 aa9.37□□□□□ -0.91
CHD1-209ENST00000512844 RASSF7Q02833 373 aa9.37□□□□□ -0.91
CHD1-209ENST00000512844 TMEM151AQ8N4L1 468 aa9.37□□□□□ -0.91
CHD1-209ENST00000512844 BHLHE41Q9C0J9 482 aaPredicted RBP9.37□□□□□ -0.91
CHD1-209ENST00000512844 SPG7Q9UQ90 795 aa9.37□□□□□ -0.91
CHD1-209ENST00000512844 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
CHD1-209ENST00000512844 LINC01387J3KSC0 135 aa9.36□□□□□ -0.91
CHD1-209ENST00000512844 GDF11O95390 407 aa9.36□□□□□ -0.91
CHD1-209ENST00000512844 ELNP15502 786 aa9.36□□□□□ -0.91
CHD1-209ENST00000512844 COL9A3Q14050 684 aaPredicted RBP9.36□□□□□ -0.91
CHD1-209ENST00000512844 EPS8L3Q8TE67 593 aaKnown RBP9.36□□□□□ -0.91
CHD1-209ENST00000512844 HHIPQ96QV1 700 aa9.36□□□□□ -0.91
CHD1-209ENST00000512844 ADAM19Q9H013 955 aa9.36□□□□□ -0.91
CHD1-209ENST00000512844 SH2B1Q9NRF2 756 aaPredicted RBP9.36□□□□□ -0.91
CHD1-209ENST00000512844 H3BRJ5 948 aa9.35□□□□□ -0.91
CHD1-209ENST00000512844 NFKBIEO00221 500 aa9.35□□□□□ -0.91
CHD1-209ENST00000512844 ITGAEP38570 1179 aa9.35□□□□□ -0.91
CHD1-209ENST00000512844 MFAP1P55081 439 aaKnown RBP9.35□□□□□ -0.91
CHD1-209ENST00000512844 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.35□□□□□ -0.91
CHD1-209ENST00000512844 DNAJC14Q6Y2X3 702 aaPredicted RBP9.35□□□□□ -0.91
CHD1-209ENST00000512844 CCNJLQ8IV13 435 aa9.35□□□□□ -0.91
CHD1-209ENST00000512844 FMR1NBQ8N0W7 255 aaPredicted RBP9.35□□□□□ -0.91
CHD1-209ENST00000512844 LOC100996750A0A140TA64 210 aa9.34□□□□□ -0.91
CHD1-209ENST00000512844 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
CHD1-209ENST00000512844 IKBKEQ14164 716 aa9.34□□□□□ -0.91
CHD1-209ENST00000512844 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
CHD1-209ENST00000512844 KRTAP4-6Q9BYQ5 205 aa9.34□□□□□ -0.91
CHD1-209ENST00000512844 ZFYVE1Q9HBF4 777 aa9.34□□□□□ -0.91
CHD1-209ENST00000512844 A0A096LPE4 126 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 A0A1W2PPZ6 126 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 GIPC1O14908 333 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 PRPF40AO75400 957 aaKnown RBP9.33□□□□□ -0.92
CHD1-209ENST00000512844 EPHA1P21709 976 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 COL8A1P27658 744 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 BAG6P46379 1132 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 PIP4K2BP78356 416 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 DTHD1Q6ZMT9 781 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 FBXO11Q86XK2 927 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 NPAS4Q8IUM7 802 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 DDX54Q8TDD1 881 aaKnown RBP9.33□□□□□ -0.92
CHD1-209ENST00000512844 SLC7A3Q8WY07 619 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
CHD1-209ENST00000512844 XPCQ01831 940 aaPredicted RBP9.32□□□□□ -0.92
CHD1-209ENST00000512844 GRM2Q14416 872 aa9.32□□□□□ -0.92
CHD1-209ENST00000512844 KLHL23Q8NBE8 558 aa9.32□□□□□ -0.92
CHD1-209ENST00000512844 WNT8BQ93098 351 aa9.32□□□□□ -0.92
CHD1-209ENST00000512844 FRMD6Q96NE9 622 aa9.32□□□□□ -0.92
CHD1-209ENST00000512844 TCF12Q99081 682 aa9.32□□□□□ -0.92
CHD1-209ENST00000512844 BCO2Q9BYV7 579 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms