RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
CLCN3-208ENST00000512813 GNRH1P01148 92 aa12.68□□□□□ -0.38
CLCN3-208ENST00000512813 KIF6Q6ZMV9 814 aa12.68□□□□□ -0.38
CLCN3-208ENST00000512813 CLMNQ96JQ2 1002 aa12.68□□□□□ -0.38
CLCN3-208ENST00000512813 NSFL1CQ9UNZ2 370 aaKnown RBP12.68□□□□□ -0.38
CLCN3-208ENST00000512813 NCOR1O75376 2440 aa12.68□□□□□ -0.38
CLCN3-208ENST00000512813 COL1A1P02452 1464 aaPredicted RBP12.67□□□□□ -0.38
CLCN3-208ENST00000512813 UNCXA6NJT0 531 aa12.67□□□□□ -0.38
CLCN3-208ENST00000512813 CCL5P13501 91 aa12.67□□□□□ -0.38
CLCN3-208ENST00000512813 MAP3K12Q12852 859 aa12.67□□□□□ -0.38
CLCN3-208ENST00000512813 U2AF1L4Q8WU68 220 aaKnown RBP12.67□□□□□ -0.38
CLCN3-208ENST00000512813 COL2A1P02458 1487 aaPredicted RBP12.66□□□□□ -0.38
CLCN3-208ENST00000512813 GJA5P36382 358 aa12.66□□□□□ -0.38
CLCN3-208ENST00000512813 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
CLCN3-208ENST00000512813 MAFAQ8NHW3 353 aaPredicted RBP12.66□□□□□ -0.38
CLCN3-208ENST00000512813 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
CLCN3-208ENST00000512813 ARHGAP39Q9C0H5 1083 aa12.66□□□□□ -0.38
CLCN3-208ENST00000512813 ZFYVE28Q9HCC9 887 aa12.66□□□□□ -0.38
CLCN3-208ENST00000512813 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
CLCN3-208ENST00000512813 KIF22Q14807 665 aa12.65□□□□□ -0.38
CLCN3-208ENST00000512813 TAF1CQ15572 869 aaPredicted RBP12.65□□□□□ -0.38
CLCN3-208ENST00000512813 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
CLCN3-208ENST00000512813 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
CLCN3-208ENST00000512813 RNF208Q9H0X6 261 aa12.65□□□□□ -0.38
CLCN3-208ENST00000512813 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
CLCN3-208ENST00000512813 FZD1Q9UP38 647 aa12.65□□□□□ -0.38
CLCN3-208ENST00000512813 ARIH1Q9Y4X5 557 aaPredicted RBP12.65□□□□□ -0.38
CLCN3-208ENST00000512813 WNT10BO00744 389 aa12.64□□□□□ -0.39
CLCN3-208ENST00000512813 CAPN2P17655 700 aa12.64□□□□□ -0.39
CLCN3-208ENST00000512813 GRK4P32298 578 aa12.64□□□□□ -0.39
CLCN3-208ENST00000512813 GPSM2P81274 684 aa12.64□□□□□ -0.39
CLCN3-208ENST00000512813 APOBEC3FQ8IUX4 373 aaKnown RBP12.64□□□□□ -0.39
CLCN3-208ENST00000512813 NGEFQ8N5V2 710 aa12.64□□□□□ -0.39
CLCN3-208ENST00000512813 TBC1D16Q8TBP0 767 aa12.64□□□□□ -0.39
CLCN3-208ENST00000512813 MAGEA10P43363 369 aaPredicted RBP12.63□□□□□ -0.39
CLCN3-208ENST00000512813 TJAP1Q5JTD0 557 aa12.63□□□□□ -0.39
CLCN3-208ENST00000512813 MORC1Q86VD1 984 aa12.63□□□□□ -0.39
CLCN3-208ENST00000512813 ZC3H12CQ9C0D7 883 aaKnown RBP12.63□□□□□ -0.39
CLCN3-208ENST00000512813 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.63□□□□□ -0.39
CLCN3-208ENST00000512813 ZMYND8Q9ULU4 1186 aaPredicted RBP12.63□□□□□ -0.39
CLCN3-208ENST00000512813 PPP1R12BO60237 982 aaPredicted RBP12.62□□□□□ -0.39
CLCN3-208ENST00000512813 SGPL1O95470 568 aa12.62□□□□□ -0.39
CLCN3-208ENST00000512813 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
CLCN3-208ENST00000512813 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
CLCN3-208ENST00000512813 FAM161BQ96MY7 647 aa12.62□□□□□ -0.39
CLCN3-208ENST00000512813 COL4A1P02462 1669 aa12.61□□□□□ -0.39
CLCN3-208ENST00000512813 G3V3G9 751 aa12.61□□□□□ -0.39
CLCN3-208ENST00000512813 UBXN2AP68543 259 aa12.61□□□□□ -0.39
CLCN3-208ENST00000512813 DCAF8Q5TAQ9 597 aa12.61□□□□□ -0.39
CLCN3-208ENST00000512813 C7orf61Q8IZ16 206 aa12.61□□□□□ -0.39
CLCN3-208ENST00000512813 BRI3BPQ8WY22 251 aa12.61□□□□□ -0.39
CLCN3-208ENST00000512813 UBE2OQ9C0C9 1292 aaKnown RBP12.61□□□□□ -0.39
CLCN3-208ENST00000512813 SRRDQ9UH36 339 aa12.61□□□□□ -0.39
CLCN3-208ENST00000512813 RIPOR2Q9Y4F9 1068 aa12.61□□□□□ -0.39
CLCN3-208ENST00000512813 OTOFQ9HC10 1997 aa12.61□□□□□ -0.39
CLCN3-208ENST00000512813 FAM205AQ6ZU69 1335 aa12.61□□□□□ -0.39
CLCN3-208ENST00000512813 CDH23Q9H251 3354 aa12.6□□□□□ -0.39
CLCN3-208ENST00000512813 USP17L3A6NCW0 530 aa12.6□□□□□ -0.39
CLCN3-208ENST00000512813 USP17L4A6NCW7 530 aa12.6□□□□□ -0.39
CLCN3-208ENST00000512813 ZNF697Q5TEC3 545 aa12.6□□□□□ -0.39
CLCN3-208ENST00000512813 USP17L1Q7RTZ2 530 aa12.6□□□□□ -0.39
CLCN3-208ENST00000512813 CELF1Q92879 486 aaKnown RBP12.6□□□□□ -0.39
CLCN3-208ENST00000512813 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
CLCN3-208ENST00000512813 CDX2Q99626 313 aaPredicted RBP12.6□□□□□ -0.39
CLCN3-208ENST00000512813 TLR2O60603 784 aa12.59□□□□□ -0.39
CLCN3-208ENST00000512813 SASH1O94885 1247 aa12.59□□□□□ -0.39
CLCN3-208ENST00000512813 OGFOD1Q8N543 542 aa12.59□□□□□ -0.39
CLCN3-208ENST00000512813 RAET1EQ8TD07 263 aa12.59□□□□□ -0.39
CLCN3-208ENST00000512813 PODXL2Q9NZ53 605 aa12.59□□□□□ -0.39
CLCN3-208ENST00000512813 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
CLCN3-208ENST00000512813 ANKRD13AQ8IZ07 590 aa12.58□□□□□ -0.4
CLCN3-208ENST00000512813 FAM43AQ8N2R8 423 aa12.58□□□□□ -0.4
CLCN3-208ENST00000512813 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
CLCN3-208ENST00000512813 UNC93B1Q9H1C4 597 aa12.58□□□□□ -0.4
CLCN3-208ENST00000512813 CCL15-CCL14A0A0B4J2E2 113 aa12.57□□□□□ -0.4
CLCN3-208ENST00000512813 WDHD1O75717 1129 aaPredicted RBP12.57□□□□□ -0.4
CLCN3-208ENST00000512813 SYN1P17600 705 aa12.57□□□□□ -0.4
CLCN3-208ENST00000512813 CTGFP29279 349 aa12.57□□□□□ -0.4
CLCN3-208ENST00000512813 IREB2P48200 963 aaKnown RBP12.57□□□□□ -0.4
CLCN3-208ENST00000512813 MMP14P50281 582 aa12.57□□□□□ -0.4
CLCN3-208ENST00000512813 CCL15Q16663 113 aa12.57□□□□□ -0.4
CLCN3-208ENST00000512813 OPTNQ96CV9 577 aa12.57□□□□□ -0.4
CLCN3-208ENST00000512813 PAWRQ96IZ0 340 aaKnown RBP12.57□□□□□ -0.4
CLCN3-208ENST00000512813 DEFB129Q9H1M3 183 aa12.57□□□□□ -0.4
CLCN3-208ENST00000512813 BIN2Q9UBW5 565 aaPredicted RBP12.57□□□□□ -0.4
CLCN3-208ENST00000512813 RRP7AQ9Y3A4 280 aaKnown RBP12.57□□□□□ -0.4
CLCN3-208ENST00000512813 PPP2R3BQ9Y5P8 575 aa12.57□□□□□ -0.4
CLCN3-208ENST00000512813 MUC6Q6W4X9 2439 aa12.57□□□□□ -0.4
CLCN3-208ENST00000512813 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
CLCN3-208ENST00000512813 UFL1O94874 794 aa12.56□□□□□ -0.4
CLCN3-208ENST00000512813 MYL6BP14649 208 aa12.56□□□□□ -0.4
CLCN3-208ENST00000512813 OSBPP22059 807 aa12.56□□□□□ -0.4
CLCN3-208ENST00000512813 HOXD10P28358 340 aa12.56□□□□□ -0.4
CLCN3-208ENST00000512813 GTF2A2P52657 109 aa12.56□□□□□ -0.4
CLCN3-208ENST00000512813 PODNQ7Z5L7 613 aa12.56□□□□□ -0.4
CLCN3-208ENST00000512813 NECAB2Q7Z6G3 386 aa12.56□□□□□ -0.4
CLCN3-208ENST00000512813 HELBQ8NG08 1087 aaPredicted RBP12.56□□□□□ -0.4
CLCN3-208ENST00000512813 ZBED3Q96IU2 234 aaPredicted RBP12.56□□□□□ -0.4
CLCN3-208ENST00000512813 ZCCHC17Q9NP64 241 aaKnown RBP12.56□□□□□ -0.4
CLCN3-208ENST00000512813 MYPNQ86TC9 1320 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms