RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 EGFLAMQ63HQ2 1017 aa10.67□□□□□ -0.7
RFC1-214ENST00000512726 FBXL19Q6PCT2 694 aa10.67□□□□□ -0.7
RFC1-214ENST00000512726 TLR7Q9NYK1 1049 aaKnown RBP10.67□□□□□ -0.7
RFC1-214ENST00000512726 SIRPGQ9P1W8 387 aa10.67□□□□□ -0.7
RFC1-214ENST00000512726 ZFATQ9P243 1243 aa10.67□□□□□ -0.7
RFC1-214ENST00000512726 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.67□□□□□ -0.7
RFC1-214ENST00000512726 SBNO2Q9Y2G9 1366 aa10.66□□□□□ -0.7
RFC1-214ENST00000512726 CLSTN1O94985 981 aa10.66□□□□□ -0.7
RFC1-214ENST00000512726 PLAURQ03405 335 aa10.66□□□□□ -0.7
RFC1-214ENST00000512726 SERINC3Q13530 473 aa10.66□□□□□ -0.7
RFC1-214ENST00000512726 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.66□□□□□ -0.76e-6■□□□□ 8.6
RFC1-214ENST00000512726 CPLX3Q8WVH0 158 aa10.66□□□□□ -0.7
RFC1-214ENST00000512726 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.66□□□□□ -0.7
RFC1-214ENST00000512726 DCDC2BA2VCK2 349 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 U2SURPO15042 1029 aaKnown RBP10.65□□□□□ -0.7
RFC1-214ENST00000512726 GREM1O60565 184 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 MAP3K6O95382 1288 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 BMP1P13497 986 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 NFKB1P19838 968 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 FAM160A1Q05DH4 1040 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 SNAP47Q5SQN1 464 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 ANKS3Q6ZW76 656 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 NLGN1Q8N2Q7 840 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 CNTNAP3BQ96NU0 1288 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 TRIM55Q9BYV6 548 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 CNTNAP3Q9BZ76 1288 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 TLR6Q9Y2C9 796 aa10.65□□□□□ -0.7
RFC1-214ENST00000512726 PF4P02776 101 aa10.64□□□□□ -0.71
RFC1-214ENST00000512726 ITPKAP23677 461 aa10.64□□□□□ -0.71
RFC1-214ENST00000512726 ETFBP38117 255 aa10.64□□□□□ -0.71
RFC1-214ENST00000512726 LMNB2Q03252 620 aa10.64□□□□□ -0.71
RFC1-214ENST00000512726 RIPOR1Q6ZS17 1223 aa10.64□□□□□ -0.71
RFC1-214ENST00000512726 JAZF1Q86VZ6 243 aa10.64□□□□□ -0.71
RFC1-214ENST00000512726 SPACA7Q96KW9 195 aa10.64□□□□□ -0.71
RFC1-214ENST00000512726 R3HCC1Q9Y3T6 440 aaKnown RBP10.64□□□□□ -0.71
RFC1-214ENST00000512726 MRVI1Q9Y6F6 885 aa10.64□□□□□ -0.71
RFC1-214ENST00000512726 CELA3AP09093 270 aa10.63□□□□□ -0.71
RFC1-214ENST00000512726 HOXD8P13378 290 aaPredicted RBP10.63□□□□□ -0.71
RFC1-214ENST00000512726 GRIA4P48058 902 aa10.63□□□□□ -0.71
RFC1-214ENST00000512726 TNP2Q05952 138 aa10.63□□□□□ -0.71
RFC1-214ENST00000512726 APOBRQ0VD83 1088 aa10.63□□□□□ -0.71
RFC1-214ENST00000512726 CAMK2GQ13555 558 aaPredicted RBP10.63□□□□□ -0.71
RFC1-214ENST00000512726 CEP120Q8N960 986 aa10.63□□□□□ -0.71
RFC1-214ENST00000512726 GOLM1Q8NBJ4 401 aa10.63□□□□□ -0.71
RFC1-214ENST00000512726 DZANK1Q9NVP4 752 aa10.63□□□□□ -0.71
RFC1-214ENST00000512726 UBP1Q9NZI7 540 aa10.63□□□□□ -0.71
RFC1-214ENST00000512726 MARK1Q9P0L2 795 aa10.63□□□□□ -0.71
RFC1-214ENST00000512726 DNMT3LQ9UJW3 386 aa10.63□□□□□ -0.71
RFC1-214ENST00000512726 MAPTP10636 758 aaKnown RBP10.62□□□□□ -0.71
RFC1-214ENST00000512726 GARTP22102 1010 aa10.62□□□□□ -0.71
RFC1-214ENST00000512726 SPEM2Q0P670 501 aa10.62□□□□□ -0.71
RFC1-214ENST00000512726 COL13A1Q5TAT6 717 aaPredicted RBP10.62□□□□□ -0.71
RFC1-214ENST00000512726 TTBK2Q6IQ55 1244 aa10.62□□□□□ -0.71
RFC1-214ENST00000512726 TRIM46Q7Z4K8 759 aa10.62□□□□□ -0.71
RFC1-214ENST00000512726 NKD1Q969G9 470 aa10.62□□□□□ -0.71
RFC1-214ENST00000512726 AVPP01185 164 aa10.61□□□□□ -0.71
RFC1-214ENST00000512726 ACPPP15309 386 aa10.61□□□□□ -0.71
RFC1-214ENST00000512726 HSD3B2P26439 372 aa10.61□□□□□ -0.71
RFC1-214ENST00000512726 RPS26P62854 115 aaKnown RBP10.61□□□□□ -0.71
RFC1-214ENST00000512726 RPS26P11Q5JNZ5 115 aaPredicted RBP10.61□□□□□ -0.71
RFC1-214ENST00000512726 PCNX4Q63HM2 1172 aa10.61□□□□□ -0.71
RFC1-214ENST00000512726 AGMOQ6ZNB7 445 aa10.61□□□□□ -0.71
RFC1-214ENST00000512726 ZFP42Q96MM3 310 aa10.61□□□□□ -0.71
RFC1-214ENST00000512726 NECAB3Q96P71 396 aaPredicted RBP10.61□□□□□ -0.71
RFC1-214ENST00000512726 SRPK1Q96SB4 655 aaKnown RBP10.61□□□□□ -0.71
RFC1-214ENST00000512726 SRRTQ9BXP5 876 aaKnown RBP10.61□□□□□ -0.71
RFC1-214ENST00000512726 BHLHE41Q9C0J9 482 aaPredicted RBP10.61□□□□□ -0.71
RFC1-214ENST00000512726 NUCKS1Q9H1E3 243 aaKnown RBP10.61□□□□□ -0.71
RFC1-214ENST00000512726 MRPL42Q9Y6G3 142 aaKnown RBP10.61□□□□□ -0.71
RFC1-214ENST00000512726 A0A096LPE4 126 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 A0A1W2PPZ6 126 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 FAM187AA6NFU0 413 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 H7C1W4 665 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 ENC1O14682 589 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 LMNB1P20700 586 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 RAB33AQ14088 237 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 TCEAL1Q15170 157 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 SPRED3Q2MJR0 410 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 DHX32Q7L7V1 743 aaKnown RBP10.6□□□□□ -0.71
RFC1-214ENST00000512726 TMEM102Q8N9M5 508 aaPredicted RBP10.6□□□□□ -0.71
RFC1-214ENST00000512726 BHMTQ93088 406 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 ANAPC16Q96DE5 110 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 STRN4Q9NRL3 753 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 PRKAG3Q9UGI9 489 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 ROBO2Q9HCK4 1378 aa10.6□□□□□ -0.71
RFC1-214ENST00000512726 SENP3-EIF4A1A0A087X0R7 540 aa10.59□□□□□ -0.71
RFC1-214ENST00000512726 KLF4O43474 513 aa10.59□□□□□ -0.71
RFC1-214ENST00000512726 MAN1A2O60476 641 aa10.59□□□□□ -0.71
RFC1-214ENST00000512726 TRPA1O75762 1119 aa10.59□□□□□ -0.71
RFC1-214ENST00000512726 NRLP54845 237 aa10.59□□□□□ -0.71
RFC1-214ENST00000512726 NEUROD1Q13562 356 aa10.59□□□□□ -0.71
RFC1-214ENST00000512726 FAM196AQ6ZSG2 479 aa10.59□□□□□ -0.71
RFC1-214ENST00000512726 NXPE3Q969Y0 559 aa10.59□□□□□ -0.71
RFC1-214ENST00000512726 NSUN5Q96P11 429 aaKnown RBP10.59□□□□□ -0.71
RFC1-214ENST00000512726 SEC31BQ9NQW1 1179 aa10.59□□□□□ -0.71
RFC1-214ENST00000512726 PDZRN3Q9UPQ7 1066 aa10.59□□□□□ -0.71
RFC1-214ENST00000512726 TFE3P19532 575 aaPredicted RBP10.58□□□□□ -0.72
RFC1-214ENST00000512726 MMRN1Q13201 1228 aa10.58□□□□□ -0.72
RFC1-214ENST00000512726 DIEXFQ68CQ4 756 aaKnown RBP10.58□□□□□ -0.72
RFC1-214ENST00000512726 SLITRK4Q8IW52 837 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms