RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 CWC25Q9NXE8 425 aaPredicted RBP20.65■□□□□ 0.9
DDR1-269ENST00000512725 WNT10BO00744 389 aa20.64■□□□□ 0.89
DDR1-269ENST00000512725 WDR43Q15061 677 aaKnown RBP eCLIP20.64■□□□□ 0.89
DDR1-269ENST00000512725 CCDC191Q8NCU4 936 aa20.64■□□□□ 0.89
DDR1-269ENST00000512725 RUNDC1Q96C34 613 aa20.64■□□□□ 0.89
DDR1-269ENST00000512725 R3HDMLQ9H3Y0 253 aa20.64■□□□□ 0.89
DDR1-269ENST00000512725 CDC5LQ99459 802 aaKnown RBP20.63■□□□□ 0.89
DDR1-269ENST00000512725 RALBP1Q15311 655 aa20.62■□□□□ 0.89
DDR1-269ENST00000512725 MBIPQ9NS73 344 aa20.62■□□□□ 0.89
DDR1-269ENST00000512725 ANGEL1Q9UNK9 670 aaKnown RBP20.62■□□□□ 0.89
DDR1-269ENST00000512725 TRIM17Q9Y577 477 aa20.62■□□□□ 0.89
DDR1-269ENST00000512725 NOM1Q5C9Z4 860 aaKnown RBP20.61■□□□□ 0.89
DDR1-269ENST00000512725 DACT2Q5SW24 774 aa20.61■□□□□ 0.89
DDR1-269ENST00000512725 FZD1Q9UP38 647 aa20.61■□□□□ 0.89
DDR1-269ENST00000512725 SPEF2Q9C093 1822 aa20.61■□□□□ 0.89
DDR1-269ENST00000512725 MED23Q9ULK4 1368 aa20.6■□□□□ 0.89
DDR1-269ENST00000512725 MYO3BQ8WXR4 1341 aa20.6■□□□□ 0.89
DDR1-269ENST00000512725 CCT4P50991 539 aaKnown RBP20.6■□□□□ 0.89
DDR1-269ENST00000512725 CTSWP56202 376 aa20.6■□□□□ 0.89
DDR1-269ENST00000512725 APOBEC3FQ8IUX4 373 aaKnown RBP20.6■□□□□ 0.89
DDR1-269ENST00000512725 SLC10A4Q96EP9 437 aa20.6■□□□□ 0.89
DDR1-269ENST00000512725 MINPP1Q9UNW1 487 aa20.6■□□□□ 0.89
DDR1-269ENST00000512725 DDX58O95786 925 aaKnown RBP20.59■□□□□ 0.89
DDR1-269ENST00000512725 STRIP1Q5VSL9 837 aa20.59■□□□□ 0.89
DDR1-269ENST00000512725 SPRYD7Q5W111 196 aa20.59■□□□□ 0.89
DDR1-269ENST00000512725 KIAA0825Q8IV33 1275 aa20.59■□□□□ 0.89
DDR1-269ENST00000512725 METTL22Q9BUU2 404 aaPredicted RBP20.59■□□□□ 0.89
DDR1-269ENST00000512725 ALDH1A1P00352 501 aa20.58■□□□□ 0.89
DDR1-269ENST00000512725 TTLL5Q6EMB2 1281 aa20.58■□□□□ 0.89
DDR1-269ENST00000512725 GREM2Q9H772 168 aa20.58■□□□□ 0.89
DDR1-269ENST00000512725 BSDC1Q9NW68 430 aaPredicted RBP20.58■□□□□ 0.89
DDR1-269ENST00000512725 POTEFA5A3E0 1075 aa20.57■□□□□ 0.88
DDR1-269ENST00000512725 HABP4Q5JVS0 413 aaKnown RBP20.57■□□□□ 0.88
DDR1-269ENST00000512725 COA1Q9GZY4 146 aa20.57■□□□□ 0.88
DDR1-269ENST00000512725 MAP3K2Q9Y2U5 619 aa20.57■□□□□ 0.88
DDR1-269ENST00000512725 TXNRD3Q86VQ6 643 aa20.56■□□□□ 0.88
DDR1-269ENST00000512725 MANSC4A6NHS7 340 aaPredicted RBP20.55■□□□□ 0.88
DDR1-269ENST00000512725 IGHMBP2P38935 993 aaKnown RBP20.55■□□□□ 0.88
DDR1-269ENST00000512725 KCNJ4P48050 445 aa20.55■□□□□ 0.88
DDR1-269ENST00000512725 GTF2IP78347 998 aa20.55■□□□□ 0.88
DDR1-269ENST00000512725 OTOP1Q7RTM1 612 aa20.55■□□□□ 0.88
DDR1-269ENST00000512725 IFNL1Q8IU54 200 aa20.55■□□□□ 0.88
DDR1-269ENST00000512725 TTLL11Q8NHH1 800 aa20.55■□□□□ 0.88
DDR1-269ENST00000512725 CFHR5Q9BXR6 569 aa20.55■□□□□ 0.88
DDR1-269ENST00000512725 ADAMTS8Q9UP79 889 aa20.55■□□□□ 0.88
DDR1-269ENST00000512725 LDLRAD1Q5T700 205 aa20.54■□□□□ 0.88
DDR1-269ENST00000512725 INTS3Q68E01 1043 aaKnown RBP20.54■□□□□ 0.88
DDR1-269ENST00000512725 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
DDR1-269ENST00000512725 MKI67P46013 3256 aaKnown RBP20.53■□□□□ 0.88
DDR1-269ENST00000512725 PPP1R12BO60237 982 aaPredicted RBP20.53■□□□□ 0.88
DDR1-269ENST00000512725 INHBEP58166 350 aa20.53■□□□□ 0.88
DDR1-269ENST00000512725 GNAI1P63096 354 aa20.53■□□□□ 0.88
DDR1-269ENST00000512725 NEXNQ0ZGT2 675 aa20.53■□□□□ 0.88
DDR1-269ENST00000512725 DLGAP5Q15398 846 aa20.53■□□□□ 0.88
DDR1-269ENST00000512725 CD99L2Q8TCZ2 262 aa20.53■□□□□ 0.88
DDR1-269ENST00000512725 CLMNQ96JQ2 1002 aa20.53■□□□□ 0.88
DDR1-269ENST00000512725 DEFB129Q9H1M3 183 aa20.53■□□□□ 0.88
DDR1-269ENST00000512725 LEMD3Q9Y2U8 911 aa20.53■□□□□ 0.88
DDR1-269ENST00000512725 KLRK1P26718 216 aa20.52■□□□□ 0.88
DDR1-269ENST00000512725 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.88
DDR1-269ENST00000512725 ERO1AQ96HE7 468 aa20.52■□□□□ 0.88
DDR1-269ENST00000512725 WNK4Q96J92 1243 aa20.52■□□□□ 0.88
DDR1-269ENST00000512725 ZNF804BA4D1E1 1349 aa20.52■□□□□ 0.87
DDR1-269ENST00000512725 MYH3P11055 1940 aa20.51■□□□□ 0.87
DDR1-269ENST00000512725 F8W031 263 aaPredicted RBP20.51■□□□□ 0.87
DDR1-269ENST00000512725 IGF2BP3O00425 579 aaKnown RBP eCLIP20.51■□□□□ 0.87
DDR1-269ENST00000512725 MMP14P50281 582 aa20.51■□□□□ 0.87
DDR1-269ENST00000512725 C8orf58Q8NAV2 365 aa20.51■□□□□ 0.87
DDR1-269ENST00000512725 MPHOSPH8Q99549 860 aa20.51■□□□□ 0.87
DDR1-269ENST00000512725 IFT57Q9NWB7 429 aa20.51■□□□□ 0.87
DDR1-269ENST00000512725 PI4KAP2A4QPH2 592 aa20.5■□□□□ 0.87
DDR1-269ENST00000512725 IGKV5-2P06315 115 aa20.5■□□□□ 0.87
DDR1-269ENST00000512725 CWF19L2Q2TBE0 894 aaKnown RBP20.5■□□□□ 0.87
DDR1-269ENST00000512725 OTUD7BQ6GQQ9 843 aa20.5■□□□□ 0.87
DDR1-269ENST00000512725 UBE3BQ7Z3V4 1068 aa20.5■□□□□ 0.87
DDR1-269ENST00000512725 PI4KAP1Q8N8J0 262 aa20.5■□□□□ 0.87
DDR1-269ENST00000512725 ANKRD2Q9GZV1 360 aa20.5■□□□□ 0.87
DDR1-269ENST00000512725 VEZTQ9HBM0 779 aa20.5■□□□□ 0.87
DDR1-269ENST00000512725 PTPN22Q9Y2R2 807 aa20.5■□□□□ 0.87
DDR1-269ENST00000512725 CENPFP49454 3210 aa20.5■□□□□ 0.87
DDR1-269ENST00000512725 ZNF646O15015 1829 aaPredicted RBP20.5■□□□□ 0.87
DDR1-269ENST00000512725 CLRN2A0PK11 232 aa20.49■□□□□ 0.87
DDR1-269ENST00000512725 ZNF853P0CG23 659 aa20.49■□□□□ 0.87
DDR1-269ENST00000512725 ZBTB48P10074 688 aaPredicted RBP20.49■□□□□ 0.87
DDR1-269ENST00000512725 EN2P19622 333 aaPredicted RBP20.49■□□□□ 0.87
DDR1-269ENST00000512725 CALD1Q05682 793 aaKnown RBP20.49■□□□□ 0.87
DDR1-269ENST00000512725 KSR2Q6VAB6 950 aa20.49■□□□□ 0.87
DDR1-269ENST00000512725 EFCC1Q9HA90 598 aa20.49■□□□□ 0.87
DDR1-269ENST00000512725 MYO1BO43795 1136 aa20.48■□□□□ 0.87
DDR1-269ENST00000512725 ITGA6P23229 1130 aa20.48■□□□□ 0.87
DDR1-269ENST00000512725 RBM5P52756 815 aaKnown RBP eCLIP20.48■□□□□ 0.87
DDR1-269ENST00000512725 CRHR2Q13324 411 aa20.48■□□□□ 0.87
DDR1-269ENST00000512725 ZBED3Q96IU2 234 aaPredicted RBP20.48■□□□□ 0.87
DDR1-269ENST00000512725 TMEM106CQ9BVX2 250 aa20.48■□□□□ 0.87
DDR1-269ENST00000512725 CHMP4AQ9BY43 222 aa20.48■□□□□ 0.87
DDR1-269ENST00000512725 PCDHAC2Q9Y5I4 1007 aa20.48■□□□□ 0.87
DDR1-269ENST00000512725 APAF1O14727 1248 aa20.47■□□□□ 0.87
DDR1-269ENST00000512725 IREB2P48200 963 aaKnown RBP20.47■□□□□ 0.87
DDR1-269ENST00000512725 SUPT20HL1Q3ZLR7 823 aa20.47■□□□□ 0.87
DDR1-269ENST00000512725 HTTP42858 3142 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms