RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 RASSF4Q9H2L5 321 aa8.49□□□□□ -1.05
PDE4D-220ENST00000512069 DCTN4Q9UJW0 460 aa8.49□□□□□ -1.05
PDE4D-220ENST00000512069 C9orf172C9J069 976 aa8.48□□□□□ -1.05
PDE4D-220ENST00000512069 NFKBIEO00221 500 aa8.48□□□□□ -1.05
PDE4D-220ENST00000512069 SMNDC1O75940 238 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDE4D-220ENST00000512069 ADAMTSL4Q6UY14 1074 aa8.48□□□□□ -1.05
PDE4D-220ENST00000512069 LENG1Q96BZ8 264 aaPredicted RBP8.48□□□□□ -1.05
PDE4D-220ENST00000512069 DMRTB1Q96MA1 342 aa8.48□□□□□ -1.05
PDE4D-220ENST00000512069 LACRTQ9GZZ8 138 aa8.48□□□□□ -1.05
PDE4D-220ENST00000512069 DZANK1Q9NVP4 752 aa8.48□□□□□ -1.05
PDE4D-220ENST00000512069 ADAM23O75077 832 aa8.47□□□□□ -1.05
PDE4D-220ENST00000512069 EDN3P14138 238 aa8.47□□□□□ -1.05
PDE4D-220ENST00000512069 ACPPP15309 386 aa8.47□□□□□ -1.05
PDE4D-220ENST00000512069 AEBP1Q8IUX7 1158 aa8.47□□□□□ -1.05
PDE4D-220ENST00000512069 ALKBH8Q96BT7 664 aaKnown RBP8.47□□□□□ -1.05
PDE4D-220ENST00000512069 POP1Q99575 1024 aaKnown RBP8.47□□□□□ -1.05
PDE4D-220ENST00000512069 MUC3BQ9H195 1237 aa8.47□□□□□ -1.05
PDE4D-220ENST00000512069 USP21Q9UK80 565 aa8.47□□□□□ -1.05
PDE4D-220ENST00000512069 AMOTL2Q9Y2J4 779 aa8.47□□□□□ -1.05
PDE4D-220ENST00000512069 TRPA1O75762 1119 aa8.46□□□□□ -1.06
PDE4D-220ENST00000512069 CDC25BP30305 580 aa8.46□□□□□ -1.06
PDE4D-220ENST00000512069 MBTPS1Q14703 1052 aa8.46□□□□□ -1.06
PDE4D-220ENST00000512069 TMC1Q8TDI8 760 aa8.46□□□□□ -1.06
PDE4D-220ENST00000512069 ADAM19Q9H013 955 aa8.46□□□□□ -1.06
PDE4D-220ENST00000512069 ADGRE1Q14246 886 aa8.45□□□□□ -1.06
PDE4D-220ENST00000512069 GALNT12Q8IXK2 581 aa8.45□□□□□ -1.06
PDE4D-220ENST00000512069 TMEM102Q8N9M5 508 aaPredicted RBP8.45□□□□□ -1.06
PDE4D-220ENST00000512069 NIF3L1Q9GZT8 377 aa8.45□□□□□ -1.06
PDE4D-220ENST00000512069 DNAJC25Q9H1X3 360 aa8.45□□□□□ -1.06
PDE4D-220ENST00000512069 TPSG1Q9NRR2 321 aa8.45□□□□□ -1.06
PDE4D-220ENST00000512069 LINC01387J3KSC0 135 aa8.44□□□□□ -1.06
PDE4D-220ENST00000512069 K7ELQ4 463 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-220ENST00000512069 GPR182O15218 404 aa8.44□□□□□ -1.06
PDE4D-220ENST00000512069 CDC27P30260 824 aa8.44□□□□□ -1.06
PDE4D-220ENST00000512069 SETDB1Q15047 1291 aa8.44□□□□□ -1.06
PDE4D-220ENST00000512069 TXNDC11Q6PKC3 985 aa8.44□□□□□ -1.06
PDE4D-220ENST00000512069 TMC7Q7Z402 723 aa8.44□□□□□ -1.06
PDE4D-220ENST00000512069 NXPE3Q969Y0 559 aa8.44□□□□□ -1.06
PDE4D-220ENST00000512069 OSMRQ99650 979 aa8.44□□□□□ -1.06
PDE4D-220ENST00000512069 SRA1Q9HD15 236 aaKnown RBP8.44□□□□□ -1.06
PDE4D-220ENST00000512069 SH2B1Q9NRF2 756 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-220ENST00000512069 PPME1Q9Y570 386 aa8.44□□□□□ -1.06
PDE4D-220ENST00000512069 PDE2AO00408 941 aaPredicted RBP8.43□□□□□ -1.06
PDE4D-220ENST00000512069 DLL1O00548 723 aa8.43□□□□□ -1.06
PDE4D-220ENST00000512069 CPNE3O75131 537 aaKnown RBP8.43□□□□□ -1.06
PDE4D-220ENST00000512069 NRG1Q02297 640 aaPredicted RBP8.43□□□□□ -1.06
PDE4D-220ENST00000512069 DSC3Q14574 896 aa8.43□□□□□ -1.06
PDE4D-220ENST00000512069 PEAR1Q5VY43 1037 aaPredicted RBP8.43□□□□□ -1.06
PDE4D-220ENST00000512069 IGF2-ASQ6U949 168 aa8.43□□□□□ -1.06
PDE4D-220ENST00000512069 MAP4K3Q8IVH8 894 aa8.43□□□□□ -1.06
PDE4D-220ENST00000512069 HHIPQ96QV1 700 aa8.43□□□□□ -1.06
PDE4D-220ENST00000512069 ZKSCAN3Q9BRR0 538 aa8.43□□□□□ -1.06
PDE4D-220ENST00000512069 PTPRAP18433 802 aa8.42□□□□□ -1.06
PDE4D-220ENST00000512069 MAPK1P28482 360 aa8.42□□□□□ -1.06
PDE4D-220ENST00000512069 PLCB3Q01970 1234 aa8.42□□□□□ -1.06
PDE4D-220ENST00000512069 ORC1Q13415 861 aa8.42□□□□□ -1.06
PDE4D-220ENST00000512069 TXNRD3Q86VQ6 643 aa8.42□□□□□ -1.06
PDE4D-220ENST00000512069 SEMA6BQ9H3T3 888 aa8.42□□□□□ -1.06
PDE4D-220ENST00000512069 EIF1AYO14602 144 aaKnown RBP8.41□□□□□ -1.06
PDE4D-220ENST00000512069 POLR3DP05423 398 aaPredicted RBP8.41□□□□□ -1.06
PDE4D-220ENST00000512069 IREB2P48200 963 aaKnown RBP8.41□□□□□ -1.06
PDE4D-220ENST00000512069 USPL1Q5W0Q7 1092 aa8.41□□□□□ -1.06
PDE4D-220ENST00000512069 ZSCAN29Q8IWY8 852 aaPredicted RBP8.41□□□□□ -1.06
PDE4D-220ENST00000512069 GALNT11Q8NCW6 608 aa8.41□□□□□ -1.06
PDE4D-220ENST00000512069 TREHO43280 583 aa8.4□□□□□ -1.06
PDE4D-220ENST00000512069 ALX3O95076 343 aa8.4□□□□□ -1.06
PDE4D-220ENST00000512069 EPHA1P21709 976 aa8.4□□□□□ -1.06
PDE4D-220ENST00000512069 RSPO4Q2I0M5 234 aaPredicted RBP8.4□□□□□ -1.06
PDE4D-220ENST00000512069 KIAA0319Q5VV43 1072 aa8.4□□□□□ -1.06
PDE4D-220ENST00000512069 WFDC12Q8WWY7 111 aa8.4□□□□□ -1.06
PDE4D-220ENST00000512069 ASB16Q96NS5 453 aa8.4□□□□□ -1.06
PDE4D-220ENST00000512069 CSRNP1Q96S65 589 aa8.4□□□□□ -1.06
PDE4D-220ENST00000512069 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
PDE4D-220ENST00000512069 BHLHE41Q9C0J9 482 aaPredicted RBP8.4□□□□□ -1.06
PDE4D-220ENST00000512069 LATS2Q9NRM7 1088 aa8.4□□□□□ -1.06
PDE4D-220ENST00000512069 A0A1W2PP55 124 aa8.39□□□□□ -1.07
PDE4D-220ENST00000512069 NOS3P29474 1203 aa8.39□□□□□ -1.07
PDE4D-220ENST00000512069 NKAPLQ5M9Q1 402 aa8.39□□□□□ -1.07
PDE4D-220ENST00000512069 SND1Q7KZF4 910 aaKnown RBP eCLIP8.39□□□□□ -1.07
PDE4D-220ENST00000512069 DCAF11Q8TEB1 546 aa8.39□□□□□ -1.07
PDE4D-220ENST00000512069 FAM177BA6PVY3 158 aa8.38□□□□□ -1.07
PDE4D-220ENST00000512069 BSNDQ8WZ55 320 aa8.38□□□□□ -1.07
PDE4D-220ENST00000512069 CCDC74AQ96AQ1 378 aa8.38□□□□□ -1.07
PDE4D-220ENST00000512069 SOX13Q9UN79 622 aa8.38□□□□□ -1.07
PDE4D-220ENST00000512069 TM4SF5O14894 197 aa8.37□□□□□ -1.07
PDE4D-220ENST00000512069 ITGB7P26010 798 aa8.37□□□□□ -1.07
PDE4D-220ENST00000512069 FAM117BQ6P1L5 589 aa8.37□□□□□ -1.07
PDE4D-220ENST00000512069 CCNJLQ8IV13 435 aa8.37□□□□□ -1.07
PDE4D-220ENST00000512069 WNT8BQ93098 351 aa8.37□□□□□ -1.07
PDE4D-220ENST00000512069 TP53INP1Q96A56 240 aa8.37□□□□□ -1.07
PDE4D-220ENST00000512069 KCNK4Q9NYG8 393 aa8.37□□□□□ -1.07
PDE4D-220ENST00000512069 FSCN2O14926 492 aa8.36□□□□□ -1.07
PDE4D-220ENST00000512069 DDX3YO15523 660 aaKnown RBP8.36□□□□□ -1.07
PDE4D-220ENST00000512069 CABP4P57796 275 aa8.36□□□□□ -1.07
PDE4D-220ENST00000512069 AGGF1Q8N302 714 aaeCLIP8.36□□□□□ -1.07
PDE4D-220ENST00000512069 KLHL23Q8NBE8 558 aa8.36□□□□□ -1.07
PDE4D-220ENST00000512069 TCF12Q99081 682 aa8.36□□□□□ -1.07
PDE4D-220ENST00000512069 SSBP4Q9BWG4 385 aaPredicted RBP8.36□□□□□ -1.07
PDE4D-220ENST00000512069 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
PDE4D-220ENST00000512069 AKTIPQ9H8T0 292 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms