RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 GIMAP6Q6P9H5 292 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 Q6ZUG5 572 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 TAF4BQ92750 862 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 DBNDD2Q9BQY9 259 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 MRVI1Q9Y6F6 885 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 ZFYP08048 801 aaPredicted RBP12.44□□□□□ -0.42
CPNE4-209ENST00000512055 ATP2B2Q01814 1243 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 HOMEZQ8IX15 550 aa12.44□□□□□ -0.42
CPNE4-209ENST00000512055 LMTK2Q8IWU2 1503 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 IFIT3O14879 490 aaKnown RBP12.43□□□□□ -0.42
CPNE4-209ENST00000512055 KIF4AO95239 1232 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 POLR3DP05423 398 aaPredicted RBP12.43□□□□□ -0.42
CPNE4-209ENST00000512055 UBE2HP62256 183 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 GCKRQ14397 625 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 CCDC129Q6ZRS4 1044 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 MICU3Q86XE3 530 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 ZNF594Q96JF6 807 aaPredicted RBP12.43□□□□□ -0.42
CPNE4-209ENST00000512055 FAM114A2Q9NRY5 505 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
CPNE4-209ENST00000512055 A0A1B0GUA9 196 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 PRAMEF22A3QJZ6 481 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 HCLS1P14317 486 aaPredicted RBP12.43□□□□□ -0.42
CPNE4-209ENST00000512055 CCDC171Q6TFL3 1326 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 SGSM2O43147 1006 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 SSH3Q8TE77 659 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 ZMAT2Q96NC0 199 aaKnown RBP12.43□□□□□ -0.42
CPNE4-209ENST00000512055 SCLT1Q96NL6 688 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 KIF2AO00139 706 aaPredicted RBP12.43□□□□□ -0.42
CPNE4-209ENST00000512055 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
CPNE4-209ENST00000512055 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
CPNE4-209ENST00000512055 RANBP6O60518 1105 aaKnown RBP12.42□□□□□ -0.42
CPNE4-209ENST00000512055 KRT222Q8N1A0 295 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 RASSF4Q9H2L5 321 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 LAMC1P11047 1609 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 PRIM1P49642 420 aaKnown RBP12.42□□□□□ -0.42
CPNE4-209ENST00000512055 BEND3Q5T5X7 828 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 RSRC1Q96IZ7 334 aaKnown RBP12.42□□□□□ -0.42
CPNE4-209ENST00000512055 ORC3Q9UBD5 711 aaPredicted RBP12.42□□□□□ -0.42
CPNE4-209ENST00000512055 SETBP1Q9Y6X0 1596 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 IVLP07476 585 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 SNX14Q9Y5W7 946 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 SLC12A7Q9Y666 1083 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 F13A1P00488 732 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 KIF5BP33176 963 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 PDE1CQ14123 709 aaPredicted RBP12.42□□□□□ -0.42
CPNE4-209ENST00000512055 SLC9C2Q5TAH2 1124 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 MSL1Q68DK7 614 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 ARHGEF25Q86VW2 580 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 EDC3Q96F86 508 aaKnown RBP12.42□□□□□ -0.42
CPNE4-209ENST00000512055 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
CPNE4-209ENST00000512055 KIF4BQ2VIQ3 1234 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 DZIP3Q86Y13 1208 aaKnown RBP12.41□□□□□ -0.42
CPNE4-209ENST00000512055 TANGO6Q9C0B7 1094 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 CBFA2T2O43439 604 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 IKQ13123 557 aaPredicted RBP12.41□□□□□ -0.42
CPNE4-209ENST00000512055 TNNI3KQ59H18 835 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 ANKIB1Q9P2G1 1089 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 FPGT-TNNI3KV9GXZ4 949 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 KLF18A0A0U1RQI7 1052 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 LRSAM1Q6UWE0 723 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 RUFY3Q7L099 469 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 NCOA7Q8NI08 942 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 KIDINS220Q9ULH0 1771 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 GSTTP1A0A1W2PQM5 241 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 DYNC1I1O14576 645 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 TTF1Q15361 905 aaPredicted RBP12.41□□□□□ -0.42
CPNE4-209ENST00000512055 DDB1Q16531 1140 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 DRC1Q96MC2 740 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 PALD1Q9ULE6 856 aa12.41□□□□□ -0.42
CPNE4-209ENST00000512055 CTDP1Q9Y5B0 961 aaPredicted RBP12.41□□□□□ -0.42
CPNE4-209ENST00000512055 PHKG2P15735 406 aa12.4□□□□□ -0.42
CPNE4-209ENST00000512055 SYT1P21579 422 aa12.4□□□□□ -0.42
CPNE4-209ENST00000512055 SLC4A8Q2Y0W8 1093 aa12.4□□□□□ -0.42
CPNE4-209ENST00000512055 FSIP1Q8NA03 581 aa12.4□□□□□ -0.42
CPNE4-209ENST00000512055 GCOM1H8Y6P7 765 aaPredicted RBP12.4□□□□□ -0.42
CPNE4-209ENST00000512055 IRS4O14654 1257 aaPredicted RBP12.4□□□□□ -0.42
CPNE4-209ENST00000512055 MYZAPP0CAP1 466 aa12.4□□□□□ -0.42
CPNE4-209ENST00000512055 SEPT14Q6ZU15 432 aa12.4□□□□□ -0.42
CPNE4-209ENST00000512055 INTS4Q96HW7 963 aaKnown RBP12.4□□□□□ -0.42
CPNE4-209ENST00000512055 C16orf45Q96MC5 204 aaPredicted RBP12.4□□□□□ -0.42
CPNE4-209ENST00000512055 CAMSAP1Q5T5Y3 1602 aa12.4□□□□□ -0.42
CPNE4-209ENST00000512055 ZWINTO95229 277 aa12.4□□□□□ -0.42
CPNE4-209ENST00000512055 CD2BP2O95400 341 aaKnown RBP12.4□□□□□ -0.42
CPNE4-209ENST00000512055 TMEM67Q5HYA8 995 aa12.4□□□□□ -0.42
CPNE4-209ENST00000512055 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.42
CPNE4-209ENST00000512055 NOL3O60936 208 aaKnown RBP12.4□□□□□ -0.42
CPNE4-209ENST00000512055 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
CPNE4-209ENST00000512055 NIP7Q9Y221 180 aaKnown RBP eCLIP12.4□□□□□ -0.42
CPNE4-209ENST00000512055 POLR1AO95602 1720 aaPredicted RBP12.4□□□□□ -0.43
CPNE4-209ENST00000512055 MCM5P33992 734 aa12.4□□□□□ -0.43
CPNE4-209ENST00000512055 UNC5CLQ8IV45 518 aa12.4□□□□□ -0.43
CPNE4-209ENST00000512055 RPUSD2Q8IZ73 545 aaKnown RBP12.4□□□□□ -0.43
CPNE4-209ENST00000512055 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms