RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
HMGCR-211ENST00000512053 TBC1D10BQ4KMP7 808 aaPredicted RBP9.41□□□□□ -0.9
HMGCR-211ENST00000512053 ANKRD13DQ6ZTN6 518 aa9.41□□□□□ -0.9
HMGCR-211ENST00000512053 LRP10Q7Z4F1 713 aa9.41□□□□□ -0.9
HMGCR-211ENST00000512053 PLBD2Q8NHP8 589 aa9.41□□□□□ -0.9
HMGCR-211ENST00000512053 KHSRPQ92945 711 aaKnown RBP eCLIP9.41□□□□□ -0.9
HMGCR-211ENST00000512053 SAGE1Q9NXZ1 904 aa9.41□□□□□ -0.9
HMGCR-211ENST00000512053 LTBP1Q14766 1721 aa9.41□□□□□ -0.9
HMGCR-211ENST00000512053 LAMB4A4D0S4 1761 aa9.4□□□□□ -0.9
HMGCR-211ENST00000512053 ECE2O60344 883 aa9.4□□□□□ -0.9
HMGCR-211ENST00000512053 TRPA1O75762 1119 aa9.4□□□□□ -0.9
HMGCR-211ENST00000512053 KIF23Q02241 960 aaPredicted RBP9.4□□□□□ -0.9
HMGCR-211ENST00000512053 SF3B3Q15393 1217 aaKnown RBP9.4□□□□□ -0.9
HMGCR-211ENST00000512053 KIF4BQ2VIQ3 1234 aa9.4□□□□□ -0.9
HMGCR-211ENST00000512053 FAM89AQ96GI7 184 aa9.4□□□□□ -0.9
HMGCR-211ENST00000512053 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.9
HMGCR-211ENST00000512053 DBF4Q9UBU7 674 aaPredicted RBP9.4□□□□□ -0.9
HMGCR-211ENST00000512053 THSD7BQ9C0I4 1608 aa9.39□□□□□ -0.91
HMGCR-211ENST00000512053 SHTN1A0MZ66 631 aa9.39□□□□□ -0.91
HMGCR-211ENST00000512053 TMPOP42166 694 aaKnown RBP9.39□□□□□ -0.91
HMGCR-211ENST00000512053 RPS8P62241 208 aaKnown RBP9.39□□□□□ -0.91
HMGCR-211ENST00000512053 GPSM2P81274 684 aa9.39□□□□□ -0.91
HMGCR-211ENST00000512053 HDGFL1Q5TGJ6 251 aa9.39□□□□□ -0.91
HMGCR-211ENST00000512053 CELF1Q92879 486 aaKnown RBP9.39□□□□□ -0.91
HMGCR-211ENST00000512053 ZNF428Q96B54 188 aa9.39□□□□□ -0.91
HMGCR-211ENST00000512053 RNF25Q96BH1 459 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-211ENST00000512053 RNF186Q9NXI6 227 aa9.39□□□□□ -0.91
HMGCR-211ENST00000512053 ADM5C9JUS6 153 aa9.38□□□□□ -0.91
HMGCR-211ENST00000512053 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
HMGCR-211ENST00000512053 IRS4O14654 1257 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-211ENST00000512053 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-211ENST00000512053 RIC3Q7Z5B4 369 aa9.38□□□□□ -0.91
HMGCR-211ENST00000512053 ZIC5Q96T25 663 aa9.38□□□□□ -0.91
HMGCR-211ENST00000512053 HYPKQ9NX55 129 aa9.38□□□□□ -0.91
HMGCR-211ENST00000512053 GGA3Q9NZ52 723 aa9.38□□□□□ -0.91
HMGCR-211ENST00000512053 CHPF2Q9P2E5 772 aa9.38□□□□□ -0.91
HMGCR-211ENST00000512053 POLLQ9UGP5 575 aa9.38□□□□□ -0.91
HMGCR-211ENST00000512053 HDAC9Q9UKV0 1011 aa9.38□□□□□ -0.91
HMGCR-211ENST00000512053 FAM155AB1AL88 458 aaPredicted RBP9.37□□□□□ -0.91
HMGCR-211ENST00000512053 CHL1O00533 1208 aa9.37□□□□□ -0.91
HMGCR-211ENST00000512053 VIL1P09327 827 aaKnown RBP9.37□□□□□ -0.91
HMGCR-211ENST00000512053 HOXB7P09629 217 aa9.37□□□□□ -0.91
HMGCR-211ENST00000512053 FKBP1BP68106 108 aa9.37□□□□□ -0.91
HMGCR-211ENST00000512053 RALBP1Q15311 655 aa9.37□□□□□ -0.91
HMGCR-211ENST00000512053 DLK2Q6UY11 383 aa9.37□□□□□ -0.91
HMGCR-211ENST00000512053 CTU1Q7Z7A3 348 aaKnown RBP9.37□□□□□ -0.91
HMGCR-211ENST00000512053 TBC1D16Q8TBP0 767 aa9.37□□□□□ -0.91
HMGCR-211ENST00000512053 ISCA1Q9BUE6 129 aa9.37□□□□□ -0.91
HMGCR-211ENST00000512053 GGA1Q9UJY5 639 aa9.37□□□□□ -0.91
HMGCR-211ENST00000512053 KDM3BQ7LBC6 1761 aa9.37□□□□□ -0.91
HMGCR-211ENST00000512053 NUP98P52948 1817 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 UFL1O94874 794 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 SLC10A3P09131 477 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 SOX10P56693 466 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 SCARF1Q14162 830 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 WDR43Q15061 677 aaKnown RBP eCLIP9.36□□□□□ -0.91
HMGCR-211ENST00000512053 PKN2Q16513 984 aaKnown RBP9.36□□□□□ -0.91
HMGCR-211ENST00000512053 CCDC152Q4G0S7 254 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 ANGEL2Q5VTE6 544 aaKnown RBP9.36□□□□□ -0.91
HMGCR-211ENST00000512053 POTEEQ6S8J3 1075 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 ZBTB38Q8NAP3 1195 aaPredicted RBP9.36□□□□□ -0.91
HMGCR-211ENST00000512053 AGBL3Q8NEM8 1001 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 CDCA5Q96FF9 252 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 CHMP4AQ9BY43 222 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 KCNQ5Q9NR82 932 aa9.36□□□□□ -0.91
HMGCR-211ENST00000512053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.35□□□□□ -0.91
HMGCR-211ENST00000512053 EGFRP00533 1210 aa9.35□□□□□ -0.91
HMGCR-211ENST00000512053 USP17L8P0C7I0 530 aa9.35□□□□□ -0.91
HMGCR-211ENST00000512053 NF2P35240 595 aa9.35□□□□□ -0.91
HMGCR-211ENST00000512053 TRIM28Q13263 835 aaKnown RBP9.35□□□□□ -0.91
HMGCR-211ENST00000512053 TTLL12Q14166 644 aaPredicted RBP9.35□□□□□ -0.91
HMGCR-211ENST00000512053 KRT24Q2M2I5 525 aa9.35□□□□□ -0.91
HMGCR-211ENST00000512053 RSBN1LQ6PCB5 846 aaPredicted RBP9.35□□□□□ -0.91
HMGCR-211ENST00000512053 CCDC146Q8IYE0 955 aa9.35□□□□□ -0.91
HMGCR-211ENST00000512053 RUNDC1Q96C34 613 aa9.35□□□□□ -0.91
HMGCR-211ENST00000512053 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
HMGCR-211ENST00000512053 CSRNP1Q96S65 589 aa9.35□□□□□ -0.91
HMGCR-211ENST00000512053 PODXL2Q9NZ53 605 aa9.35□□□□□ -0.91
HMGCR-211ENST00000512053 USP17L3A6NCW0 530 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 USP17L4A6NCW7 530 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 ATP2B4P23634 1241 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 DUSP27Q5VZP5 1158 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 USP17L1Q7RTZ2 530 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 PODNQ7Z5L7 613 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 ANKRD18AQ8IVF6 992 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 OGFOD1Q8N543 542 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 MYOZ2Q9NPC6 264 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 RTL9Q8NET4 1388 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 TRPM7Q96QT4 1865 aa9.34□□□□□ -0.91
HMGCR-211ENST00000512053 PDE8AO60658 829 aa9.33□□□□□ -0.92
HMGCR-211ENST00000512053 DDX58O95786 925 aaKnown RBP9.33□□□□□ -0.92
HMGCR-211ENST00000512053 ZNF280AP59817 542 aaPredicted RBP9.33□□□□□ -0.92
HMGCR-211ENST00000512053 CALD1Q05682 793 aaKnown RBP9.33□□□□□ -0.92
HMGCR-211ENST00000512053 CCDC191Q8NCU4 936 aa9.33□□□□□ -0.92
HMGCR-211ENST00000512053 MYD88Q99836 296 aa9.33□□□□□ -0.92
HMGCR-211ENST00000512053 SEC31BQ9NQW1 1179 aa9.33□□□□□ -0.92
HMGCR-211ENST00000512053 XDHP47989 1333 aa9.32□□□□□ -0.92
HMGCR-211ENST00000512053 PITPNM2Q9BZ72 1349 aa9.32□□□□□ -0.92
HMGCR-211ENST00000512053 RIOK3O14730 519 aaKnown RBP9.32□□□□□ -0.92
HMGCR-211ENST00000512053 PCCAP05165 728 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms