RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 MXD3Q9BW11 206 aa20.76■□□□□ 0.91
DDX41-213ENST00000512027 API5Q9BZZ5 524 aaKnown RBP20.76■□□□□ 0.91
DDX41-213ENST00000512027 IRS2Q9Y4H2 1338 aa20.76■□□□□ 0.91
DDX41-213ENST00000512027 H7C1D1 291 aa20.75■□□□□ 0.91
DDX41-213ENST00000512027 RBM26Q5T8P6 1007 aaKnown RBP20.75■□□□□ 0.91
DDX41-213ENST00000512027 KLHDC4Q8TBB5 520 aa20.75■□□□□ 0.91
DDX41-213ENST00000512027 POLR2AP24928 1970 aaKnown RBP20.75■□□□□ 0.91
DDX41-213ENST00000512027 KIF16BQ96L93 1317 aa20.75■□□□□ 0.91
DDX41-213ENST00000512027 RPS12P25398 132 aaKnown RBP20.74■□□□□ 0.91
DDX41-213ENST00000512027 RSBN1LQ6PCB5 846 aaPredicted RBP20.74■□□□□ 0.91
DDX41-213ENST00000512027 PODNQ7Z5L7 613 aa20.74■□□□□ 0.91
DDX41-213ENST00000512027 CREBZFQ9NS37 354 aa20.74■□□□□ 0.91
DDX41-213ENST00000512027 PCNTO95613 3336 aa20.74■□□□□ 0.91
DDX41-213ENST00000512027 ZBED9Q6R2W3 1325 aa20.74■□□□□ 0.91
DDX41-213ENST00000512027 USP17L3A6NCW0 530 aa20.73■□□□□ 0.91
DDX41-213ENST00000512027 USP17L4A6NCW7 530 aa20.73■□□□□ 0.91
DDX41-213ENST00000512027 USP17L1Q7RTZ2 530 aa20.73■□□□□ 0.91
DDX41-213ENST00000512027 FRAT1Q92837 279 aaPredicted RBP20.73■□□□□ 0.91
DDX41-213ENST00000512027 GLIS2Q9BZE0 524 aaPredicted RBP20.73■□□□□ 0.91
DDX41-213ENST00000512027 COA1Q9GZY4 146 aa20.73■□□□□ 0.91
DDX41-213ENST00000512027 MKRN1Q9UHC7 482 aaKnown RBP20.73■□□□□ 0.91
DDX41-213ENST00000512027 LRRC24Q50LG9 513 aa20.72■□□□□ 0.91
DDX41-213ENST00000512027 DLK2Q6UY11 383 aa20.72■□□□□ 0.91
DDX41-213ENST00000512027 ZNF609O15014 1411 aa20.71■□□□□ 0.91
DDX41-213ENST00000512027 TMEM88BA6NKF7 163 aa20.71■□□□□ 0.91
DDX41-213ENST00000512027 DACT2Q5SW24 774 aa20.71■□□□□ 0.91
DDX41-213ENST00000512027 GMLQ99445 158 aa20.71■□□□□ 0.91
DDX41-213ENST00000512027 MEIS3Q99687 375 aa20.71■□□□□ 0.91
DDX41-213ENST00000512027 ASTN2O75129 1339 aaPredicted RBP20.71■□□□□ 0.91
DDX41-213ENST00000512027 UBTFL1P0CB47 393 aaPredicted RBP20.7■□□□□ 0.9
DDX41-213ENST00000512027 TRIM27P14373 513 aa20.7■□□□□ 0.9
DDX41-213ENST00000512027 KIF4BQ2VIQ3 1234 aa20.7■□□□□ 0.9
DDX41-213ENST00000512027 AGBL3Q8NEM8 1001 aa20.7■□□□□ 0.9
DDX41-213ENST00000512027 CLUAP1Q96AJ1 413 aa20.7■□□□□ 0.9
DDX41-213ENST00000512027 PGAP2Q9UHJ9 254 aa20.7■□□□□ 0.9
DDX41-213ENST00000512027 ARHGAP45Q92619 1136 aa20.69■□□□□ 0.9
DDX41-213ENST00000512027 CD209Q9NNX6 404 aa20.69■□□□□ 0.9
DDX41-213ENST00000512027 RIPOR2Q9Y4F9 1068 aa20.69■□□□□ 0.9
DDX41-213ENST00000512027 LRRFIP2Q9Y608 721 aaKnown RBP20.69■□□□□ 0.9
DDX41-213ENST00000512027 RFX5P48382 616 aaPredicted RBP20.68■□□□□ 0.9
DDX41-213ENST00000512027 ZNF280AP59817 542 aaPredicted RBP20.68■□□□□ 0.9
DDX41-213ENST00000512027 GTF2IP78347 998 aa20.68■□□□□ 0.9
DDX41-213ENST00000512027 JAG2Q9Y219 1238 aa20.68■□□□□ 0.9
DDX41-213ENST00000512027 USP17L8P0C7I0 530 aa20.67■□□□□ 0.9
DDX41-213ENST00000512027 STRIP1Q5VSL9 837 aa20.67■□□□□ 0.9
DDX41-213ENST00000512027 CST9Q5W186 159 aa20.67■□□□□ 0.9
DDX41-213ENST00000512027 INTS3Q68E01 1043 aaKnown RBP20.67■□□□□ 0.9
DDX41-213ENST00000512027 TTLL5Q6EMB2 1281 aa20.67■□□□□ 0.9
DDX41-213ENST00000512027 ATF7IPQ6VMQ6 1270 aa20.67■□□□□ 0.9
DDX41-213ENST00000512027 C15orf52Q6ZUT6 534 aaKnown RBP20.67■□□□□ 0.9
DDX41-213ENST00000512027 USP48Q86UV5 1035 aa20.67■□□□□ 0.9
DDX41-213ENST00000512027 JMYQ8N9B5 988 aa20.67■□□□□ 0.9
DDX41-213ENST00000512027 ZC3H15Q8WU90 426 aaKnown RBP20.67■□□□□ 0.9
DDX41-213ENST00000512027 CNTNAP1P78357 1384 aa20.67■□□□□ 0.9
DDX41-213ENST00000512027 GYG1P46976 350 aa20.66■□□□□ 0.9
DDX41-213ENST00000512027 METTL24Q5JXM2 366 aa20.66■□□□□ 0.9
DDX41-213ENST00000512027 ZNF804AQ7Z570 1209 aa20.66■□□□□ 0.9
DDX41-213ENST00000512027 ZNF408Q9H9D4 720 aa20.66■□□□□ 0.9
DDX41-213ENST00000512027 MYOZ2Q9NPC6 264 aa20.66■□□□□ 0.9
DDX41-213ENST00000512027 GGA3Q9NZ52 723 aa20.66■□□□□ 0.9
DDX41-213ENST00000512027 MROH5Q6ZUA9 1318 aa20.66■□□□□ 0.9
DDX41-213ENST00000512027 ADM5C9JUS6 153 aa20.65■□□□□ 0.9
DDX41-213ENST00000512027 PTPN12Q05209 780 aaKnown RBP20.65■□□□□ 0.9
DDX41-213ENST00000512027 ABT1Q9ULW3 272 aaKnown RBP20.65■□□□□ 0.9
DDX41-213ENST00000512027 SCAF8Q9UPN6 1271 aaKnown RBP20.65■□□□□ 0.9
DDX41-213ENST00000512027 IPO8O15397 1037 aaKnown RBP20.64■□□□□ 0.89
DDX41-213ENST00000512027 CELF2O95319 508 aaKnown RBP20.64■□□□□ 0.89
DDX41-213ENST00000512027 UBE4AQ14139 1066 aa20.64■□□□□ 0.89
DDX41-213ENST00000512027 SCARF1Q14162 830 aa20.64■□□□□ 0.89
DDX41-213ENST00000512027 CDC37L1Q7L3B6 337 aa20.64■□□□□ 0.89
DDX41-213ENST00000512027 KIAA0825Q8IV33 1275 aa20.64■□□□□ 0.89
DDX41-213ENST00000512027 CERS5Q8N5B7 392 aa20.64■□□□□ 0.89
DDX41-213ENST00000512027 VGLL2Q8N8G2 317 aa20.64■□□□□ 0.89
DDX41-213ENST00000512027 SIL1Q9H173 461 aa20.64■□□□□ 0.89
DDX41-213ENST00000512027 ARAP2Q8WZ64 1704 aa20.64■□□□□ 0.89
DDX41-213ENST00000512027 IL1R1P14778 569 aa20.63■□□□□ 0.89
DDX41-213ENST00000512027 ANGEL2Q5VTE6 544 aaKnown RBP20.63■□□□□ 0.89
DDX41-213ENST00000512027 ZKSCAN2Q63HK3 967 aa20.63■□□□□ 0.89
DDX41-213ENST00000512027 KRT26Q7Z3Y9 468 aa20.63■□□□□ 0.89
DDX41-213ENST00000512027 PA2G4Q9UQ80 394 aaKnown RBP20.63■□□□□ 0.89
DDX41-213ENST00000512027 MYO3BQ8WXR4 1341 aa20.62■□□□□ 0.89
DDX41-213ENST00000512027 VEGFBP49765 207 aa20.62■□□□□ 0.89
DDX41-213ENST00000512027 NBPF9Q3BBW0 867 aa20.62■□□□□ 0.89
DDX41-213ENST00000512027 TMEM57Q8N5G2 664 aa20.62■□□□□ 0.89
DDX41-213ENST00000512027 DCPSQ96C86 337 aaKnown RBP20.62■□□□□ 0.89
DDX41-213ENST00000512027 FAM84BQ96KN1 310 aaPredicted RBP20.62■□□□□ 0.89
DDX41-213ENST00000512027 IQSEC3Q9UPP2 1182 aaPredicted RBP20.62■□□□□ 0.89
DDX41-213ENST00000512027 MYH13Q9UKX3 1938 aa20.61■□□□□ 0.89
DDX41-213ENST00000512027 RASSF10A6NK89 507 aa20.61■□□□□ 0.89
DDX41-213ENST00000512027 EYA2O00167 538 aa20.61■□□□□ 0.89
DDX41-213ENST00000512027 SASH1O94885 1247 aa20.61■□□□□ 0.89
DDX41-213ENST00000512027 PDE8BO95263 885 aa20.61■□□□□ 0.89
DDX41-213ENST00000512027 ATG9AQ7Z3C6 839 aa20.61■□□□□ 0.89
DDX41-213ENST00000512027 F8W031 263 aaPredicted RBP20.6■□□□□ 0.89
DDX41-213ENST00000512027 HIBADHP31937 336 aaKnown RBP20.6■□□□□ 0.89
DDX41-213ENST00000512027 DEFB115Q30KQ5 88 aa20.6■□□□□ 0.89
DDX41-213ENST00000512027 PCDHAC2Q9Y5I4 1007 aa20.6■□□□□ 0.89
DDX41-213ENST00000512027 GNAI3P08754 354 aa20.59■□□□□ 0.89
DDX41-213ENST00000512027 GRM1Q13255 1194 aa20.59■□□□□ 0.89
DDX41-213ENST00000512027 PAXIP1Q6ZW49 1069 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms