RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ARHGAP45Q92619 1136 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 ZNF462Q96JM2 2506 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 FAM155AB1AL88 458 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 ERVV-2B6SEH9 535 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 MAP3K13O43283 966 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 CSF1RP07333 972 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 GNAI3P08754 354 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 H2AFXP16104 143 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 HOXD11P31277 338 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 BYSLQ13895 437 aaKnown RBP2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 BMP2KLQ5H9B9 411 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 TTLL5Q6EMB2 1281 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 RBSNQ9H1K0 784 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 MXRA5Q9NR99 2828 aa2.15□□□□□ -2.07
TRAPPC13-211ENST00000512009 SENP2Q9HC62 589 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 TSKSQ9UJT2 592 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 FDPSP14324 419 aaKnown RBP2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 ECHS1P30084 290 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 NECTIN1Q15223 517 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 TNFAIP8L3Q5GJ75 292 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 TNFRSF25Q93038 417 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 USP44Q9H0E7 712 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 RCAN3Q9UKA8 241 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 SPTBN4Q9H254 2564 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 CCDC189A1A4V9 331 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 CYP27B1O15528 508 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 SASH3O75995 380 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 STOX1Q6ZVD7 989 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 KLRG1Q96E93 195 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 MKRN1Q9UHC7 482 aaKnown RBP2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 USP21Q9UK80 565 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 PCDHA3Q9Y5H8 950 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 MUC22E2RYF6 1773 aaPredicted RBP2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 COL5A1P20908 1838 aaPredicted RBP2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 SNX17Q15036 470 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 RGL3Q3MIN7 710 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 IL17REQ8NFR9 667 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 ARID3AQ99856 593 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 SLC4A1APQ9BWU0 796 aaKnown RBP2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 PODXL2Q9NZ53 605 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 SCN5AQ14524 2016 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 ACEP12821 1306 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 BAZ2BQ9UIF8 2168 aaKnown RBP2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 A0A0U1RQJ8 604 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 SMIM22K7EJ46 135 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 PSEN1P49768 467 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 RABL6Q3YEC7 729 aaPredicted RBP2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 ATRIPQ8WXE1 791 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 EPB41L4BQ9H329 900 aa2.14□□□□□ -2.07
TRAPPC13-211ENST00000512009 MAP1BP46821 2468 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 YBX3P16989 372 aaKnown RBP eCLIP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 GHRHRQ02643 423 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 FAM228AQ86W67 206 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 KLHL34Q8N239 644 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 ANKRD44Q8N8A2 993 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 KIF1BPQ96EK5 621 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 LSG1Q9H089 658 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 CHIC2Q9UKJ5 165 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 HOXB7P09629 217 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 CREB5Q02930 508 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 TBX2Q13207 712 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 CLEC4GQ6UXB4 293 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 G2E3Q7L622 706 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 C16orf71Q8IYS4 520 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 VOPP1Q96AW1 172 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 EMILIN1Q9Y6C2 1016 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 PNMA6EA0A0J9YXQ4 647 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 NFKBIEO00221 500 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 TCERG1O14776 1098 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 IGKV5-2P06315 115 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 TMPOP42166 694 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 CBLBQ13191 982 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 MVPQ14764 893 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 NAA30Q147X3 362 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 FAM43AQ8N2R8 423 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 ZGPATQ8N5A5 531 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 GZF1Q9H116 711 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 TENM4Q6N022 2769 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 RANGAP1P46060 587 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 FKBP5Q13451 457 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 TMED8Q6PL24 325 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 ZNF276Q8N554 614 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 ZC3H15Q8WU90 426 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 ESF1Q9H501 851 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 TTC41PQ6P2S7 1318 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 SLC4A3P48751 1232 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 ZNF280AP59817 542 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 PSME1Q06323 249 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 TOB2Q14106 344 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 TXNRD1Q16881 649 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 CEP85Q6P2H3 762 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 KIAA1524Q8TCG1 905 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 PANK1Q8TE04 598 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 OTUD5Q96G74 571 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 DENND2AQ9ULE3 1009 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 NOL7Q9UMY1 257 aaKnown RBP2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 FHOD1Q9Y613 1164 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 CACNA1EQ15878 2313 aa2.13□□□□□ -2.07
TRAPPC13-211ENST00000512009 TMEM265A0A087WTH1 108 aa2.12□□□□□ -2.07
TRAPPC13-211ENST00000512009 HTATSF1O43719 755 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms