RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ZBTB38Q8NAP3 1195 aaPredicted RBP15.09■□□□□ 0.01
RNF4-216ENST00000511859 ARMC5Q96C12 935 aa15.09■□□□□ 0.01
RNF4-216ENST00000511859 CHPF2Q9P2E5 772 aa15.09■□□□□ 0.01
RNF4-216ENST00000511859 DBF4Q9UBU7 674 aaPredicted RBP15.09■□□□□ 0.01
RNF4-216ENST00000511859 ZBTB48P10074 688 aaPredicted RBP15.08■□□□□ 0
RNF4-216ENST00000511859 EN2P19622 333 aaPredicted RBP15.08■□□□□ 0
RNF4-216ENST00000511859 LMOD3Q0VAK6 560 aa15.08■□□□□ 0
RNF4-216ENST00000511859 APOBEC3FQ8IUX4 373 aaKnown RBP15.08■□□□□ 0
RNF4-216ENST00000511859 SLC10A4Q96EP9 437 aa15.08■□□□□ 0
RNF4-216ENST00000511859 TMEM106CQ9BVX2 250 aa15.08■□□□□ 0
RNF4-216ENST00000511859 COLQQ9Y215 455 aaPredicted RBP15.08■□□□□ 0
RNF4-216ENST00000511859 UNCXA6NJT0 531 aa15.07■□□□□ 0
RNF4-216ENST00000511859 PRKG1Q13976 671 aa15.07■□□□□ 0
RNF4-216ENST00000511859 DACT2Q5SW24 774 aa15.07■□□□□ 0
RNF4-216ENST00000511859 STRIP1Q5VSL9 837 aa15.07■□□□□ 0
RNF4-216ENST00000511859 OTUD7BQ6GQQ9 843 aa15.07■□□□□ 0
RNF4-216ENST00000511859 HYPKQ9NX55 129 aa15.07■□□□□ 0
RNF4-216ENST00000511859 ANGEL1Q9UNK9 670 aaKnown RBP15.07■□□□□ 0
RNF4-216ENST00000511859 A0A0C4DFX4 3053 aa15.07■□□□□ 0
RNF4-216ENST00000511859 CHL1O00533 1208 aa15.06■□□□□ 0
RNF4-216ENST00000511859 PDE8AO60658 829 aa15.06■□□□□ 0
RNF4-216ENST00000511859 HOXB7P09629 217 aa15.06■□□□□ 0
RNF4-216ENST00000511859 MAP3K11Q16584 847 aa15.06■□□□□ 0
RNF4-216ENST00000511859 HDGFL1Q5TGJ6 251 aa15.06■□□□□ 0
RNF4-216ENST00000511859 ANKRD18AQ8IVF6 992 aa15.06■□□□□ 0
RNF4-216ENST00000511859 EFCC1Q9HA90 598 aa15.06■□□□□ 0
RNF4-216ENST00000511859 NBPF11Q86T75 865 aa15.05■□□□□ -0
RNF4-216ENST00000511859 PPP1R12BO60237 982 aaPredicted RBP15.04■□□□□ -0
RNF4-216ENST00000511859 TMPOP42166 694 aaKnown RBP15.04■□□□□ -0
RNF4-216ENST00000511859 SP3Q02447 781 aa15.04■□□□□ -0
RNF4-216ENST00000511859 ARHGEF6Q15052 776 aa15.04■□□□□ -0
RNF4-216ENST00000511859 KRT24Q2M2I5 525 aa15.04■□□□□ -0
RNF4-216ENST00000511859 RIC3Q7Z5B4 369 aa15.04■□□□□ -0
RNF4-216ENST00000511859 CD99L2Q8TCZ2 262 aa15.04■□□□□ -0
RNF4-216ENST00000511859 COA1Q9GZY4 146 aa15.04■□□□□ -0
RNF4-216ENST00000511859 RANBP2P49792 3224 aaKnown RBP15.04■□□□□ -0
RNF4-216ENST00000511859 IGF2BP3O00425 579 aaKnown RBP eCLIP15.03■□□□□ -0
RNF4-216ENST00000511859 CCDC191Q8NCU4 936 aa15.03■□□□□ -0
RNF4-216ENST00000511859 MXD3Q9BW11 206 aa15.03■□□□□ -0
RNF4-216ENST00000511859 MED23Q9ULK4 1368 aa15.03■□□□□ -0
RNF4-216ENST00000511859 LAMB1P07942 1786 aa15.03■□□□□ -0
RNF4-216ENST00000511859 PCCAP05165 728 aaPredicted RBP15.02■□□□□ -0
RNF4-216ENST00000511859 TTLL5Q6EMB2 1281 aa15.02■□□□□ -0
RNF4-216ENST00000511859 FBXW7Q969H0 707 aa15.02■□□□□ -0
RNF4-216ENST00000511859 WNK4Q96J92 1243 aa15.02■□□□□ -0
RNF4-216ENST00000511859 ZNF333Q96JL9 665 aa15.02■□□□□ -0
RNF4-216ENST00000511859 CDC5LQ99459 802 aaKnown RBP15.02■□□□□ -0
RNF4-216ENST00000511859 DEFB129Q9H1M3 183 aa15.02■□□□□ -0
RNF4-216ENST00000511859 COL1A1P02452 1464 aaPredicted RBP15.02■□□□□ -0
RNF4-216ENST00000511859 SASH1O94885 1247 aa15.01□□□□□ -0.01
RNF4-216ENST00000511859 CRHR2Q13324 411 aa15.01□□□□□ -0.01
RNF4-216ENST00000511859 OTUD5Q96G74 571 aa15.01□□□□□ -0.01
RNF4-216ENST00000511859 ZBED3Q96IU2 234 aaPredicted RBP15.01□□□□□ -0.01
RNF4-216ENST00000511859 BSDC1Q9NW68 430 aaPredicted RBP15.01□□□□□ -0.01
RNF4-216ENST00000511859 MINPP1Q9UNW1 487 aa15.01□□□□□ -0.01
RNF4-216ENST00000511859 PPP2R3BQ9Y5P8 575 aa15.01□□□□□ -0.01
RNF4-216ENST00000511859 CCT4P50991 539 aaKnown RBP15□□□□□ -0.01
RNF4-216ENST00000511859 GOLGA2Q08379 1002 aa15□□□□□ -0.01
RNF4-216ENST00000511859 SUPT20HL1Q3ZLR7 823 aa15□□□□□ -0.01
RNF4-216ENST00000511859 CCDC85AQ96PX6 553 aaPredicted RBP15□□□□□ -0.01
RNF4-216ENST00000511859 TESPA1A2RU30 521 aaPredicted RBP14.99□□□□□ -0.01
RNF4-216ENST00000511859 WTIPA6NIX2 430 aaPredicted RBP14.99□□□□□ -0.01
RNF4-216ENST00000511859 SLC9C1Q4G0N8 1177 aa14.99□□□□□ -0.01
RNF4-216ENST00000511859 KIAA0825Q8IV33 1275 aa14.99□□□□□ -0.01
RNF4-216ENST00000511859 CWC25Q9NXE8 425 aaPredicted RBP14.99□□□□□ -0.01
RNF4-216ENST00000511859 FZD1Q9UP38 647 aa14.99□□□□□ -0.01
RNF4-216ENST00000511859 LEMD3Q9Y2U8 911 aa14.99□□□□□ -0.01
RNF4-216ENST00000511859 LAS1LQ9Y4W2 734 aaKnown RBP14.99□□□□□ -0.01
RNF4-216ENST00000511859 ZNF646O15015 1829 aaPredicted RBP14.99□□□□□ -0.01
RNF4-216ENST00000511859 COL6A3P12111 3177 aa14.99□□□□□ -0.01
RNF4-216ENST00000511859 H0YGN5 161 aa14.98□□□□□ -0.01
RNF4-216ENST00000511859 DLL1O00548 723 aa14.98□□□□□ -0.01
RNF4-216ENST00000511859 SLC4A8Q2Y0W8 1093 aa14.98□□□□□ -0.01
RNF4-216ENST00000511859 CLMNQ96JQ2 1002 aa14.98□□□□□ -0.01
RNF4-216ENST00000511859 MYD88Q99836 296 aa14.98□□□□□ -0.01
RNF4-216ENST00000511859 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.98□□□□□ -0.01
RNF4-216ENST00000511859 IREB2P48200 963 aaKnown RBP14.98□□□□□ -0.01
RNF4-216ENST00000511859 DLGAP5Q15398 846 aa14.98□□□□□ -0.01
RNF4-216ENST00000511859 DUSP27Q5VZP5 1158 aa14.98□□□□□ -0.01
RNF4-216ENST00000511859 MTMR14Q8NCE2 650 aa14.98□□□□□ -0.01
RNF4-216ENST00000511859 PTPN18Q99952 460 aa14.98□□□□□ -0.01
RNF4-216ENST00000511859 CUL9Q8IWT3 2517 aa14.97□□□□□ -0.01
RNF4-216ENST00000511859 MYO1BO43795 1136 aa14.97□□□□□ -0.01
RNF4-216ENST00000511859 ANKRD13AQ8IZ07 590 aa14.97□□□□□ -0.01
RNF4-216ENST00000511859 SLC17A8Q8NDX2 589 aa14.97□□□□□ -0.01
RNF4-216ENST00000511859 USP2O75604 605 aaPredicted RBP14.96□□□□□ -0.02
RNF4-216ENST00000511859 CTSWP56202 376 aa14.96□□□□□ -0.02
RNF4-216ENST00000511859 GTF2IP78347 998 aa14.96□□□□□ -0.02
RNF4-216ENST00000511859 NEUROD2Q15784 382 aa14.96□□□□□ -0.02
RNF4-216ENST00000511859 TXNRD3Q86VQ6 643 aa14.96□□□□□ -0.02
RNF4-216ENST00000511859 TTLL11Q8NHH1 800 aa14.96□□□□□ -0.02
RNF4-216ENST00000511859 JARID2Q92833 1246 aaPredicted RBP14.96□□□□□ -0.02
RNF4-216ENST00000511859 MYH3P11055 1940 aa14.96□□□□□ -0.02
RNF4-216ENST00000511859 ECM29Q5VYK3 1845 aa14.95□□□□□ -0.02
RNF4-216ENST00000511859 GJA5P36382 358 aa14.95□□□□□ -0.02
RNF4-216ENST00000511859 CAP1Q01518 475 aa14.95□□□□□ -0.02
RNF4-216ENST00000511859 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
RNF4-216ENST00000511859 METTL22Q9BUU2 404 aaPredicted RBP14.95□□□□□ -0.02
RNF4-216ENST00000511859 ANKRD2Q9GZV1 360 aa14.95□□□□□ -0.02
RNF4-216ENST00000511859 PHAXQ9H814 394 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms