RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 DPF2Q92785 391 aa16.74■□□□□ 0.27
RNF4-215ENST00000511843 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
RNF4-215ENST00000511843 TNNQ9UQP3 1299 aa16.74■□□□□ 0.27
RNF4-215ENST00000511843 TMEM88BA6NKF7 163 aa16.73■□□□□ 0.27
RNF4-215ENST00000511843 BCAR3O75815 825 aa16.73■□□□□ 0.27
RNF4-215ENST00000511843 RPS12P25398 132 aaKnown RBP16.73■□□□□ 0.27
RNF4-215ENST00000511843 RSBN1LQ6PCB5 846 aaPredicted RBP16.73■□□□□ 0.27
RNF4-215ENST00000511843 DLK2Q6UY11 383 aa16.73■□□□□ 0.27
RNF4-215ENST00000511843 KLHDC4Q8TBB5 520 aa16.73■□□□□ 0.27
RNF4-215ENST00000511843 GLIS2Q9BZE0 524 aaPredicted RBP16.73■□□□□ 0.27
RNF4-215ENST00000511843 IRS2Q9Y4H2 1338 aa16.72■□□□□ 0.27
RNF4-215ENST00000511843 USP17L3A6NCW0 530 aa16.72■□□□□ 0.27
RNF4-215ENST00000511843 USP17L4A6NCW7 530 aa16.72■□□□□ 0.27
RNF4-215ENST00000511843 RABL6Q3YEC7 729 aaPredicted RBP16.72■□□□□ 0.27
RNF4-215ENST00000511843 USP17L1Q7RTZ2 530 aa16.72■□□□□ 0.27
RNF4-215ENST00000511843 PODNQ7Z5L7 613 aa16.72■□□□□ 0.27
RNF4-215ENST00000511843 PCNTO95613 3336 aa16.72■□□□□ 0.27
RNF4-215ENST00000511843 ASTN2O75129 1339 aaPredicted RBP16.71■□□□□ 0.27
RNF4-215ENST00000511843 BRPF1P55201 1214 aaPredicted RBP16.71■□□□□ 0.27
RNF4-215ENST00000511843 KIF4BQ2VIQ3 1234 aa16.71■□□□□ 0.27
RNF4-215ENST00000511843 GMLQ99445 158 aa16.71■□□□□ 0.27
RNF4-215ENST00000511843 API5Q9BZZ5 524 aaKnown RBP16.71■□□□□ 0.27
RNF4-215ENST00000511843 COA1Q9GZY4 146 aa16.71■□□□□ 0.27
RNF4-215ENST00000511843 KIF16BQ96L93 1317 aa16.7■□□□□ 0.26
RNF4-215ENST00000511843 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
RNF4-215ENST00000511843 DACT2Q5SW24 774 aa16.7■□□□□ 0.26
RNF4-215ENST00000511843 FRAT1Q92837 279 aaPredicted RBP16.7■□□□□ 0.26
RNF4-215ENST00000511843 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
RNF4-215ENST00000511843 ZNF609O15014 1411 aa16.7■□□□□ 0.26
RNF4-215ENST00000511843 GTF2IP78347 998 aa16.69■□□□□ 0.26
RNF4-215ENST00000511843 CST9Q5W186 159 aa16.69■□□□□ 0.26
RNF4-215ENST00000511843 JMYQ8N9B5 988 aa16.69■□□□□ 0.26
RNF4-215ENST00000511843 AGBL3Q8NEM8 1001 aa16.69■□□□□ 0.26
RNF4-215ENST00000511843 MEIS3Q99687 375 aa16.69■□□□□ 0.26
RNF4-215ENST00000511843 ZNF408Q9H9D4 720 aa16.69■□□□□ 0.26
RNF4-215ENST00000511843 CD209Q9NNX6 404 aa16.69■□□□□ 0.26
RNF4-215ENST00000511843 ABT1Q9ULW3 272 aaKnown RBP16.69■□□□□ 0.26
RNF4-215ENST00000511843 JAG2Q9Y219 1238 aa16.69■□□□□ 0.26
RNF4-215ENST00000511843 RIPOR2Q9Y4F9 1068 aa16.69■□□□□ 0.26
RNF4-215ENST00000511843 MYH13Q9UKX3 1938 aa16.68■□□□□ 0.26
RNF4-215ENST00000511843 CNTNAP1P78357 1384 aa16.68■□□□□ 0.26
RNF4-215ENST00000511843 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
RNF4-215ENST00000511843 USP48Q86UV5 1035 aa16.68■□□□□ 0.26
RNF4-215ENST00000511843 ZC3H15Q8WU90 426 aaKnown RBP16.68■□□□□ 0.26
RNF4-215ENST00000511843 CLUAP1Q96AJ1 413 aa16.68■□□□□ 0.26
RNF4-215ENST00000511843 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
RNF4-215ENST00000511843 ADM5C9JUS6 153 aa16.67■□□□□ 0.26
RNF4-215ENST00000511843 USP17L8P0C7I0 530 aa16.67■□□□□ 0.26
RNF4-215ENST00000511843 TRIM27P14373 513 aa16.67■□□□□ 0.26
RNF4-215ENST00000511843 ZNF280AP59817 542 aaPredicted RBP16.67■□□□□ 0.26
RNF4-215ENST00000511843 STRIP1Q5VSL9 837 aa16.67■□□□□ 0.26
RNF4-215ENST00000511843 TTLL5Q6EMB2 1281 aa16.67■□□□□ 0.26
RNF4-215ENST00000511843 GGA3Q9NZ52 723 aa16.67■□□□□ 0.26
RNF4-215ENST00000511843 SCAF8Q9UPN6 1271 aaKnown RBP16.67■□□□□ 0.26
RNF4-215ENST00000511843 LRRFIP2Q9Y608 721 aaKnown RBP16.67■□□□□ 0.26
RNF4-215ENST00000511843 ARAP2Q8WZ64 1704 aa16.67■□□□□ 0.26
RNF4-215ENST00000511843 ECM29Q5VYK3 1845 aa16.66■□□□□ 0.26
RNF4-215ENST00000511843 CELF2O95319 508 aaKnown RBP16.66■□□□□ 0.26
RNF4-215ENST00000511843 GYG1P46976 350 aa16.66■□□□□ 0.26
RNF4-215ENST00000511843 RFX5P48382 616 aaPredicted RBP16.66■□□□□ 0.26
RNF4-215ENST00000511843 VEGFBP49765 207 aa16.66■□□□□ 0.26
RNF4-215ENST00000511843 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
RNF4-215ENST00000511843 C15orf52Q6ZUT6 534 aaKnown RBP16.66■□□□□ 0.26
RNF4-215ENST00000511843 CDC37L1Q7L3B6 337 aa16.66■□□□□ 0.26
RNF4-215ENST00000511843 KRT26Q7Z3Y9 468 aa16.66■□□□□ 0.26
RNF4-215ENST00000511843 ZNF804AQ7Z570 1209 aa16.66■□□□□ 0.26
RNF4-215ENST00000511843 MYOZ2Q9NPC6 264 aa16.66■□□□□ 0.26
RNF4-215ENST00000511843 SCARF1Q14162 830 aa16.65■□□□□ 0.26
RNF4-215ENST00000511843 INTS3Q68E01 1043 aaKnown RBP16.65■□□□□ 0.26
RNF4-215ENST00000511843 KIAA0825Q8IV33 1275 aa16.65■□□□□ 0.26
RNF4-215ENST00000511843 CERS5Q8N5B7 392 aa16.65■□□□□ 0.26
RNF4-215ENST00000511843 ARHGAP45Q92619 1136 aa16.65■□□□□ 0.26
RNF4-215ENST00000511843 MROH5Q6ZUA9 1318 aa16.65■□□□□ 0.26
RNF4-215ENST00000511843 GRM1Q13255 1194 aa16.64■□□□□ 0.25
RNF4-215ENST00000511843 UBE4AQ14139 1066 aa16.64■□□□□ 0.25
RNF4-215ENST00000511843 DEFB115Q30KQ5 88 aa16.64■□□□□ 0.25
RNF4-215ENST00000511843 NBPF9Q3BBW0 867 aa16.64■□□□□ 0.25
RNF4-215ENST00000511843 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
RNF4-215ENST00000511843 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
RNF4-215ENST00000511843 VGLL2Q8N8G2 317 aa16.64■□□□□ 0.25
RNF4-215ENST00000511843 DCPSQ96C86 337 aaKnown RBP16.64■□□□□ 0.25
RNF4-215ENST00000511843 SIL1Q9H173 461 aa16.64■□□□□ 0.25
RNF4-215ENST00000511843 RASSF10A6NK89 507 aa16.63■□□□□ 0.25
RNF4-215ENST00000511843 IPO8O15397 1037 aaKnown RBP16.63■□□□□ 0.25
RNF4-215ENST00000511843 SASH1O94885 1247 aa16.63■□□□□ 0.25
RNF4-215ENST00000511843 IL1R1P14778 569 aa16.63■□□□□ 0.25
RNF4-215ENST00000511843 PTPN12Q05209 780 aaKnown RBP16.63■□□□□ 0.25
RNF4-215ENST00000511843 PAXIP1Q6ZW49 1069 aaPredicted RBP16.63■□□□□ 0.25
RNF4-215ENST00000511843 IQSEC3Q9UPP2 1182 aaPredicted RBP16.63■□□□□ 0.25
RNF4-215ENST00000511843 MYO3BQ8WXR4 1341 aa16.63■□□□□ 0.25
RNF4-215ENST00000511843 F8W031 263 aaPredicted RBP16.62■□□□□ 0.25
RNF4-215ENST00000511843 FAM84BQ96KN1 310 aaPredicted RBP16.62■□□□□ 0.25
RNF4-215ENST00000511843 PA2G4Q9UQ80 394 aaKnown RBP16.62■□□□□ 0.25
RNF4-215ENST00000511843 EYA2O00167 538 aa16.61■□□□□ 0.25
RNF4-215ENST00000511843 PDE8BO95263 885 aa16.61■□□□□ 0.25
RNF4-215ENST00000511843 HSPA1AP0DMV8 641 aaKnown RBP16.61■□□□□ 0.25
RNF4-215ENST00000511843 HSPA1BP0DMV9 641 aaKnown RBP16.61■□□□□ 0.25
RNF4-215ENST00000511843 ZKSCAN2Q63HK3 967 aa16.61■□□□□ 0.25
RNF4-215ENST00000511843 CYP4F22Q6NT55 531 aa16.61■□□□□ 0.25
RNF4-215ENST00000511843 ATG9AQ7Z3C6 839 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms