RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 DLEC1Q9Y238 1755 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 MYH3P11055 1940 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 FZD9O00144 591 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 EYA2O00167 538 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 BBOX1O75936 387 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 SUSD4Q5VX71 490 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 CNTROBQ8N137 903 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 CRAMP1Q96RY5 1269 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 CNTNAP1P78357 1384 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 SCN4AP35499 1836 aa11.14□□□□□ -0.63
NR1I3-228ENST00000511676 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
NR1I3-228ENST00000511676 POTECB2RU33 542 aa11.13□□□□□ -0.63
NR1I3-228ENST00000511676 GLRX3O76003 335 aaKnown RBP11.13□□□□□ -0.63
NR1I3-228ENST00000511676 SASH1O94885 1247 aa11.13□□□□□ -0.63
NR1I3-228ENST00000511676 HOXA10P31260 410 aaPredicted RBP11.13□□□□□ -0.63
NR1I3-228ENST00000511676 TNIP1Q15025 636 aa11.13□□□□□ -0.63
NR1I3-228ENST00000511676 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
NR1I3-228ENST00000511676 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
NR1I3-228ENST00000511676 NIM1KQ8IY84 436 aa11.13□□□□□ -0.63
NR1I3-228ENST00000511676 C7orf43Q8WVR3 580 aa11.13□□□□□ -0.63
NR1I3-228ENST00000511676 AKAP2Q9Y2D5 859 aa11.13□□□□□ -0.63
NR1I3-228ENST00000511676 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
NR1I3-228ENST00000511676 DICER1Q9UPY3 1922 aaKnown RBP11.12□□□□□ -0.63
NR1I3-228ENST00000511676 CDC45O75419 566 aa11.12□□□□□ -0.63
NR1I3-228ENST00000511676 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
NR1I3-228ENST00000511676 MAP2K2P36507 400 aa11.12□□□□□ -0.63
NR1I3-228ENST00000511676 HTRA3P83110 453 aa11.12□□□□□ -0.63
NR1I3-228ENST00000511676 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
NR1I3-228ENST00000511676 LARGE2Q8N3Y3 721 aa11.12□□□□□ -0.63
NR1I3-228ENST00000511676 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
NR1I3-228ENST00000511676 UPF2Q9HAU5 1272 aaKnown RBP11.12□□□□□ -0.63
NR1I3-228ENST00000511676 MKRN1Q9UHC7 482 aaKnown RBP11.12□□□□□ -0.63
NR1I3-228ENST00000511676 ABT1Q9ULW3 272 aaKnown RBP11.12□□□□□ -0.63
NR1I3-228ENST00000511676 PA2G4Q9UQ80 394 aaKnown RBP11.12□□□□□ -0.63
NR1I3-228ENST00000511676 PASKQ96RG2 1323 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 ZNF609O15014 1411 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 RASSF10A6NK89 507 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 APBB1O00213 710 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 EPB41L2O43491 1005 aaKnown RBP11.11□□□□□ -0.63
NR1I3-228ENST00000511676 SMARCA5O60264 1052 aaPredicted RBP11.11□□□□□ -0.63
NR1I3-228ENST00000511676 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
NR1I3-228ENST00000511676 ITGA6P23229 1130 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 CRY2Q49AN0 593 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 ATG9AQ7Z3C6 839 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 CDC5LQ99459 802 aaKnown RBP11.11□□□□□ -0.63
NR1I3-228ENST00000511676 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
NR1I3-228ENST00000511676 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
NR1I3-228ENST00000511676 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 RFX7Q2KHR2 1363 aa11.11□□□□□ -0.63
NR1I3-228ENST00000511676 MROH5Q6ZUA9 1318 aa11.1□□□□□ -0.63
NR1I3-228ENST00000511676 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
NR1I3-228ENST00000511676 PI4K2BQ8TCG2 481 aa11.1□□□□□ -0.63
NR1I3-228ENST00000511676 HHIPL1Q96JK4 782 aa11.1□□□□□ -0.63
NR1I3-228ENST00000511676 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
NR1I3-228ENST00000511676 ADARB2Q9NS39 739 aaKnown RBP11.1□□□□□ -0.63
NR1I3-228ENST00000511676 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
NR1I3-228ENST00000511676 FER1L6Q2WGJ9 1857 aa11.1□□□□□ -0.63
NR1I3-228ENST00000511676 ITGBL1O95965 494 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-228ENST00000511676 RTL5Q5HYW3 569 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-228ENST00000511676 DDX46Q7L014 1031 aaKnown RBP11.09□□□□□ -0.63
NR1I3-228ENST00000511676 AACSQ86V21 672 aa11.09□□□□□ -0.63
NR1I3-228ENST00000511676 REM2Q8IYK8 340 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-228ENST00000511676 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
NR1I3-228ENST00000511676 OTUD7AQ8TE49 926 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-228ENST00000511676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.09□□□□□ -0.63
NR1I3-228ENST00000511676 JARID2Q92833 1246 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-228ENST00000511676 SIL1Q9H173 461 aa11.09□□□□□ -0.63
NR1I3-228ENST00000511676 GREM2Q9H772 168 aa11.09□□□□□ -0.63
NR1I3-228ENST00000511676 WBP1LQ9NX94 342 aa11.09□□□□□ -0.63
NR1I3-228ENST00000511676 RIPOR2Q9Y4F9 1068 aa11.09□□□□□ -0.63
NR1I3-228ENST00000511676 GJA3Q9Y6H8 435 aa11.09□□□□□ -0.63
NR1I3-228ENST00000511676 CCDC88AQ3V6T2 1871 aa11.08□□□□□ -0.64
NR1I3-228ENST00000511676 SPEF2Q9C093 1822 aa11.08□□□□□ -0.64
NR1I3-228ENST00000511676 FAM177BA6PVY3 158 aa11.08□□□□□ -0.64
NR1I3-228ENST00000511676 H7C1D1 291 aa11.08□□□□□ -0.64
NR1I3-228ENST00000511676 PPEF1O14829 653 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-228ENST00000511676 ATP5JP18859 108 aa11.08□□□□□ -0.64
NR1I3-228ENST00000511676 SDSP20132 328 aa11.08□□□□□ -0.64
NR1I3-228ENST00000511676 TFCP2Q12800 502 aa11.08□□□□□ -0.64
NR1I3-228ENST00000511676 LDHAL6AQ6ZMR3 332 aa11.08□□□□□ -0.64
NR1I3-228ENST00000511676 EAF2Q96CJ1 260 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-228ENST00000511676 ZNF512BQ96KM6 892 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-228ENST00000511676 ZNRF3Q9ULT6 936 aa11.08□□□□□ -0.64
NR1I3-228ENST00000511676 WDR33Q9C0J8 1336 aaKnown RBP11.08□□□□□ -0.64
NR1I3-228ENST00000511676 TIAM2Q8IVF5 1701 aa11.07□□□□□ -0.64
NR1I3-228ENST00000511676 HIP1O00291 1037 aa11.07□□□□□ -0.64
NR1I3-228ENST00000511676 PPIP5K2O43314 1243 aa11.07□□□□□ -0.64
NR1I3-228ENST00000511676 HCLS1P14317 486 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-228ENST00000511676 IGHMBP2P38935 993 aaKnown RBP11.07□□□□□ -0.64
NR1I3-228ENST00000511676 VEGFBP49765 207 aa11.07□□□□□ -0.64
NR1I3-228ENST00000511676 DPP8Q6V1X1 898 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-228ENST00000511676 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
NR1I3-228ENST00000511676 PAXIP1Q6ZW49 1069 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-228ENST00000511676 CDC37L1Q7L3B6 337 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms