RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 VPS37CA5D8V6 355 aaPredicted RBP8.42□□□□□ -1.06
CPNE4-208ENST00000511604 MYO1FO00160 1098 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 PPFIA2O75334 1257 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 NR1I2O75469 434 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 PPP2R3AQ06190 1150 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 AMOTL1Q8IY63 956 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 RPUSD2Q8IZ73 545 aaKnown RBP8.42□□□□□ -1.06
CPNE4-208ENST00000511604 NECAB1Q8N987 351 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 CCDC102AQ96A19 550 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 XAGE2Q96GT9 111 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 SUDS3Q9H7L9 328 aaPredicted RBP8.42□□□□□ -1.06
CPNE4-208ENST00000511604 CABP2Q9NPB3 220 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 PRKAR2BP31323 418 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 FNTAP49354 379 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 PTPN21Q16825 1174 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 TWISTNBQ3B726 338 aaPredicted RBP8.42□□□□□ -1.06
CPNE4-208ENST00000511604 NFXL1Q6ZNB6 911 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 GOLGA1Q92805 767 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 ZBTB10Q96DT7 871 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 DDX19AQ9NUU7 478 aaKnown RBP8.42□□□□□ -1.06
CPNE4-208ENST00000511604 ANAPC4Q9UJX5 808 aa8.42□□□□□ -1.06
CPNE4-208ENST00000511604 ARHGEF40Q8TER5 1519 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 CCP110O43303 1012 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 ILDR2Q71H61 639 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 CADPS2Q86UW7 1296 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 CEP112Q8N8E3 955 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 CCDC150Q8NCX0 1101 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 AFAP1L1Q8TED9 768 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 ARHGAP45Q92619 1136 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 TTC14Q96N46 770 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 KDM4CQ9H3R0 1056 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 CLSTN2Q9H4D0 955 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 IMPACTQ9P2X3 320 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 L1RE1Q9UN81 338 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 TTC37Q6PGP7 1564 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 PEX19P40855 299 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 PRPHP41219 470 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 USP5P45974 858 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 RAB27AP51159 221 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 MAP3K9P80192 1104 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 SF3A1Q15459 793 aaKnown RBP8.41□□□□□ -1.06
CPNE4-208ENST00000511604 CDC37L1Q7L3B6 337 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 SNX14Q9Y5W7 946 aa8.41□□□□□ -1.06
CPNE4-208ENST00000511604 NRDCO43847 1150 aa8.4□□□□□ -1.06
CPNE4-208ENST00000511604 SFPQP23246 707 aaKnown RBP eCLIP8.4□□□□□ -1.06
CPNE4-208ENST00000511604 MAGEA8P43361 318 aa8.4□□□□□ -1.06
CPNE4-208ENST00000511604 NAA25Q14CX7 972 aa8.4□□□□□ -1.06
CPNE4-208ENST00000511604 CDCA2Q69YH5 1023 aaPredicted RBP8.4□□□□□ -1.06
CPNE4-208ENST00000511604 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.06
CPNE4-208ENST00000511604 ARMCX5Q6P1M9 558 aa8.4□□□□□ -1.06
CPNE4-208ENST00000511604 CRACR2AQ9BSW2 395 aa8.4□□□□□ -1.06
CPNE4-208ENST00000511604 TMX4Q9H1E5 349 aaPredicted RBP8.4□□□□□ -1.06
CPNE4-208ENST00000511604 CHCHD3Q9NX63 227 aaKnown RBP8.4□□□□□ -1.06
CPNE4-208ENST00000511604 SMC3Q9UQE7 1217 aa8.4□□□□□ -1.06
CPNE4-208ENST00000511604 MRFAP1Q9Y605 127 aa8.4□□□□□ -1.06
CPNE4-208ENST00000511604 MYOM2P54296 1465 aa8.4□□□□□ -1.06
CPNE4-208ENST00000511604 ERLIN1O75477 346 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 FSBPO95073 299 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 ECEL1O95672 775 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 IBSPP21815 317 aaPredicted RBP8.4□□□□□ -1.07
CPNE4-208ENST00000511604 ABCD1P33897 745 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 NAP1L1P55209 391 aaKnown RBP8.4□□□□□ -1.07
CPNE4-208ENST00000511604 ADCK5Q3MIX3 580 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 NUTM2DQ5VT03 806 aaPredicted RBP8.4□□□□□ -1.07
CPNE4-208ENST00000511604 ARMCX6Q7L4S7 300 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 KIRREL3Q8IZU9 778 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 C3orf20Q8ND61 904 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 SAAL1Q96ER3 474 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 PGBD1Q96JS3 809 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 MPHOSPH8Q99549 860 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 SUGCTQ9HAC7 445 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 RPGRIP1LQ68CZ1 1315 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 SAMD9LQ8IVG5 1584 aa8.4□□□□□ -1.07
CPNE4-208ENST00000511604 ATP10BO94823 1461 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 F6X3S4 739 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 SHOX2O60902 331 aaPredicted RBP8.39□□□□□ -1.07
CPNE4-208ENST00000511604 RNF40O75150 1001 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 PYGLP06737 847 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 CHGAP10645 457 aaKnown RBP8.39□□□□□ -1.07
CPNE4-208ENST00000511604 SLC8A3P57103 927 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 PSME1Q06323 249 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 GOLGA8FQ08AF8 430 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 GOLGA8DPQ0D2H9 430 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 CASP8Q14790 479 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 RCSD1Q6JBY9 416 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 TLDC1Q6P9B6 456 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 SPDL1Q96EA4 605 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 KLC4Q9NSK0 619 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 DDX20Q9UHI6 824 aaKnown RBP8.39□□□□□ -1.07
CPNE4-208ENST00000511604 ZNF232Q9UNY5 417 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 PTPRMP28827 1452 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 UGGT1Q9NYU2 1555 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 BECN2A8MW95 431 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 SETSIPP0DME0 302 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 CEP85LQ5SZL2 805 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 SPDYE1Q8NFV5 336 aaPredicted RBP8.39□□□□□ -1.07
CPNE4-208ENST00000511604 IL17RAQ96F46 866 aa8.39□□□□□ -1.07
CPNE4-208ENST00000511604 IRX2Q9BZI1 471 aaPredicted RBP8.39□□□□□ -1.07
CPNE4-208ENST00000511604 RAB21Q9UL25 225 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms