RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ADGRL1O94910 1474 aa6.53□□□□□ -1.36
TOPBP1-208ENST00000511439 IFT140Q96RY7 1462 aa6.53□□□□□ -1.36
TOPBP1-208ENST00000511439 FAM177BA6PVY3 158 aa6.53□□□□□ -1.36
TOPBP1-208ENST00000511439 F8W735 103 aaPredicted RBP6.53□□□□□ -1.36
TOPBP1-208ENST00000511439 TNFRSF10BO14763 440 aa6.53□□□□□ -1.36
TOPBP1-208ENST00000511439 SETDB1Q15047 1291 aa6.53□□□□□ -1.36
TOPBP1-208ENST00000511439 PSMG3-AS1Q96PY0 264 aa6.53□□□□□ -1.36
TOPBP1-208ENST00000511439 SLAIN2Q9P270 581 aa6.53□□□□□ -1.36
TOPBP1-208ENST00000511439 KDM6BO15054 1643 aa6.52□□□□□ -1.37
TOPBP1-208ENST00000511439 SCNN1AP37088 669 aa6.52□□□□□ -1.37
TOPBP1-208ENST00000511439 NAA30Q147X3 362 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-208ENST00000511439 PDE12Q6L8Q7 609 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-208ENST00000511439 FAM117BQ6P1L5 589 aa6.52□□□□□ -1.37
TOPBP1-208ENST00000511439 TRAIPQ9BWF2 469 aa6.52□□□□□ -1.37
TOPBP1-208ENST00000511439 ABI2Q9NYB9 513 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-208ENST00000511439 TRIM33Q9UPN9 1127 aa6.52□□□□□ -1.37
TOPBP1-208ENST00000511439 EIF4G3O43432 1585 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-208ENST00000511439 URB2Q14146 1524 aaKnown RBP6.51□□□□□ -1.37
TOPBP1-208ENST00000511439 GSC2O15499 205 aa6.51□□□□□ -1.37
TOPBP1-208ENST00000511439 HYAL3O43820 417 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-208ENST00000511439 KIF4AO95239 1232 aa6.51□□□□□ -1.37
TOPBP1-208ENST00000511439 PDIA4P13667 645 aaKnown RBP6.51□□□□□ -1.37
TOPBP1-208ENST00000511439 Q6ZS46 218 aa6.51□□□□□ -1.37
TOPBP1-208ENST00000511439 GPR152Q8TDT2 470 aa6.51□□□□□ -1.37
TOPBP1-208ENST00000511439 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
TOPBP1-208ENST00000511439 CLASP1Q7Z460 1538 aa6.5□□□□□ -1.37
TOPBP1-208ENST00000511439 GAPVD1Q14C86 1478 aa6.5□□□□□ -1.37
TOPBP1-208ENST00000511439 PCSK2P16519 638 aa6.5□□□□□ -1.37
TOPBP1-208ENST00000511439 CDC27P30260 824 aa6.5□□□□□ -1.37
TOPBP1-208ENST00000511439 CEP135Q66GS9 1140 aa6.5□□□□□ -1.37
TOPBP1-208ENST00000511439 CEP41Q9BYV8 373 aa6.5□□□□□ -1.37
TOPBP1-208ENST00000511439 PEG3Q9GZU2 1588 aa6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 KIF13AQ9H1H9 1805 aa6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 ALX3O95076 343 aa6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 GLB1P16278 677 aa6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 ATP2B4P23634 1241 aa6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 CD68P34810 354 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 FAM26DQ5JW98 314 aa6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 CAPN12Q6ZSI9 719 aa6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 NCAPG2Q86XI2 1143 aa6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 KLHL23Q8NBE8 558 aa6.49□□□□□ -1.37
TOPBP1-208ENST00000511439 LINC01387J3KSC0 135 aa6.48□□□□□ -1.37
TOPBP1-208ENST00000511439 PTPRAP18433 802 aa6.48□□□□□ -1.37
TOPBP1-208ENST00000511439 FSTP19883 344 aa6.48□□□□□ -1.37
TOPBP1-208ENST00000511439 SSFA2P28290 1259 aa6.48□□□□□ -1.37
TOPBP1-208ENST00000511439 UVSSAQ2YD98 709 aa6.48□□□□□ -1.37
TOPBP1-208ENST00000511439 PHLDB3Q6NSJ2 640 aa6.48□□□□□ -1.37
TOPBP1-208ENST00000511439 TTC16Q8NEE8 873 aa6.48□□□□□ -1.37
TOPBP1-208ENST00000511439 PBX4Q9BYU1 374 aa6.48□□□□□ -1.37
TOPBP1-208ENST00000511439 DHX15O43143 795 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 BRD1O95696 1058 aa6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 CABP4P57796 275 aa6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 ATP11AP98196 1134 aa6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 COL13A1Q5TAT6 717 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 ZNF438Q7Z4V0 828 aa6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 NUDT16Q96DE0 195 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 LACRTQ9GZZ8 138 aa6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 RASSF4Q9H2L5 321 aa6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 ELP3Q9H9T3 547 aa6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 RAXQ9Y2V3 346 aa6.47□□□□□ -1.37
TOPBP1-208ENST00000511439 SYNJ1O43426 1573 aa6.46□□□□□ -1.38
TOPBP1-208ENST00000511439 B4GALNT3Q6L9W6 998 aa6.46□□□□□ -1.38
TOPBP1-208ENST00000511439 XKR5Q6UX68 686 aa6.46□□□□□ -1.38
TOPBP1-208ENST00000511439 ACAD11Q709F0 780 aa6.46□□□□□ -1.38
TOPBP1-208ENST00000511439 CEP120Q8N960 986 aa6.46□□□□□ -1.38
TOPBP1-208ENST00000511439 GALNT11Q8NCW6 608 aa6.46□□□□□ -1.38
TOPBP1-208ENST00000511439 HELQQ8TDG4 1101 aa6.46□□□□□ -1.38
TOPBP1-208ENST00000511439 WNT8BQ93098 351 aa6.46□□□□□ -1.38
TOPBP1-208ENST00000511439 PMEPA1Q969W9 287 aa6.46□□□□□ -1.38
TOPBP1-208ENST00000511439 FSCN2O14926 492 aa6.45□□□□□ -1.38
TOPBP1-208ENST00000511439 ZBTB39O15060 712 aa6.45□□□□□ -1.38
TOPBP1-208ENST00000511439 DUOXA2Q1HG44 320 aa6.45□□□□□ -1.38
TOPBP1-208ENST00000511439 AGGF1Q8N302 714 aaeCLIP6.45□□□□□ -1.38
TOPBP1-208ENST00000511439 ADAM19Q9H013 955 aa6.45□□□□□ -1.38
TOPBP1-208ENST00000511439 SEC31BQ9NQW1 1179 aa6.45□□□□□ -1.38
TOPBP1-208ENST00000511439 PCMTD2Q9NV79 361 aa6.45□□□□□ -1.38
TOPBP1-208ENST00000511439 STOML1Q9UBI4 398 aa6.45□□□□□ -1.38
TOPBP1-208ENST00000511439 PIP4K2BP78356 416 aa6.44□□□□□ -1.38
TOPBP1-208ENST00000511439 NOM1Q5C9Z4 860 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-208ENST00000511439 ALKBH2Q6NS38 261 aa6.44□□□□□ -1.38
TOPBP1-208ENST00000511439 TXNDC11Q6PKC3 985 aa6.44□□□□□ -1.38
TOPBP1-208ENST00000511439 OSGEPQ9NPF4 335 aa6.44□□□□□ -1.38
TOPBP1-208ENST00000511439 SEPT3Q9UH03 358 aa6.44□□□□□ -1.38
TOPBP1-208ENST00000511439 H3BRJ5 948 aa6.43□□□□□ -1.38
TOPBP1-208ENST00000511439 IGLV1-40P01703 118 aa6.43□□□□□ -1.38
TOPBP1-208ENST00000511439 CYP2E1P05181 493 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-208ENST00000511439 EPHA1P21709 976 aa6.43□□□□□ -1.38
TOPBP1-208ENST00000511439 CES1P23141 567 aa6.43□□□□□ -1.38
TOPBP1-208ENST00000511439 UTP4Q969X6 686 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-208ENST00000511439 UBL7Q96S82 380 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-208ENST00000511439 TMEM63CQ9P1W3 806 aa6.43□□□□□ -1.38
TOPBP1-208ENST00000511439 WISP1O95388 367 aa6.42□□□□□ -1.38
TOPBP1-208ENST00000511439 MZF1P28698 734 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-208ENST00000511439 ARL4DP49703 201 aa6.42□□□□□ -1.38
TOPBP1-208ENST00000511439 DNM1Q05193 864 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-208ENST00000511439 EDEM1Q92611 657 aa6.42□□□□□ -1.38
TOPBP1-208ENST00000511439 POP1Q99575 1024 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-208ENST00000511439 CARD10Q9BWT7 1032 aa6.42□□□□□ -1.38
TOPBP1-208ENST00000511439 KANSL3Q9P2N6 904 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms