RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TLR7Q9NYK1 1049 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 PARP2Q9UGN5 583 aa5.71□□□□□ -1.5
TRAPPC11-207ENST00000511409 UNCXA6NJT0 531 aa5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 GADD45BO75293 160 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 RANGAP1P46060 587 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 MLLT1Q03111 559 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 PLAURQ03405 335 aa5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 PSMD2Q13200 908 aa5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 ZMYM1Q5SVZ6 1142 aa5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 MICALL1Q8N3F8 863 aa5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 OR13H1Q8NG92 308 aa5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 TRPM4Q8TD43 1214 aa5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 EPS8L3Q8TE67 593 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 FAM161BQ96MY7 647 aa5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 NSUN5Q96P11 429 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 KRTAP4-12Q9BQ66 201 aa5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 NPHS2Q9NP85 383 aa5.7□□□□□ -1.5
TRAPPC11-207ENST00000511409 SOX18P35713 384 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 HYAL2Q12891 473 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 HFE2Q6ZVN8 426 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 ILDR2Q71H61 639 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 FBF1Q8TES7 1133 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 TTC9Q92623 222 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 TRIM11Q96F44 468 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 SPACA7Q96KW9 195 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 RNF19AQ9NV58 838 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 DNAJB12Q9NXW2 375 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 FRRS1LQ9P0K9 344 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 SLC6A14Q9UN76 642 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 SPG7Q9UQ90 795 aa5.69□□□□□ -1.5
TRAPPC11-207ENST00000511409 SPDYE3A6NKU9 549 aa5.68□□□□□ -1.5
TRAPPC11-207ENST00000511409 ALBP02768 609 aa5.68□□□□□ -1.5
TRAPPC11-207ENST00000511409 EDN3P14138 238 aa5.68□□□□□ -1.5
TRAPPC11-207ENST00000511409 NRLP54845 237 aa5.68□□□□□ -1.5
TRAPPC11-207ENST00000511409 GPLD1P80108 840 aa5.68□□□□□ -1.5
TRAPPC11-207ENST00000511409 PI16Q6UXB8 463 aa5.68□□□□□ -1.5
TRAPPC11-207ENST00000511409 GALNT12Q8IXK2 581 aa5.68□□□□□ -1.5
TRAPPC11-207ENST00000511409 SEMA6BQ9H3T3 888 aa5.68□□□□□ -1.5
TRAPPC11-207ENST00000511409 VTI1BQ9UEU0 232 aa5.68□□□□□ -1.5
TRAPPC11-207ENST00000511409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC11-207ENST00000511409 J3QW42 95 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 M0R082 166 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 SORBS3O60504 671 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 GHRHP01286 108 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 SPATA31C1P0DKV0 1188 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 NID1P14543 1247 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 GNA15P30679 374 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 ITGAEP38570 1179 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 COL13A1Q5TAT6 717 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 ZNF417Q8TAU3 575 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 ZNF587Q96SQ5 575 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 EHD4Q9H223 541 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 LATS2Q9NRM7 1088 aa5.67□□□□□ -1.5
TRAPPC11-207ENST00000511409 LOC102724428A0A0B4J2F2 783 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 ZBTB42B2RXF5 422 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 LILRB5O75023 590 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 CPB1P15086 417 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 EIF2AK2P19525 551 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 GATA4P43694 442 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 SIK1P57059 783 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 DAB2P98082 770 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 RSPO4Q2I0M5 234 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 FAM35AQ86V20 835 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 OSMRQ99650 979 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 PLVAPQ9BX97 442 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 RBSNQ9H1K0 784 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 KIAA1522Q9P206 1035 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 SALL4Q9UJQ4 1053 aa5.66□□□□□ -1.5
TRAPPC11-207ENST00000511409 TRPA1O75762 1119 aa5.65□□□□□ -1.5
TRAPPC11-207ENST00000511409 ACPPP15309 386 aa5.65□□□□□ -1.5
TRAPPC11-207ENST00000511409 EIF4BP23588 611 aaKnown RBP5.65□□□□□ -1.5
TRAPPC11-207ENST00000511409 DOC2BQ14184 412 aa5.65□□□□□ -1.5
TRAPPC11-207ENST00000511409 TSNAXIP1Q2TAA8 658 aa5.65□□□□□ -1.5
TRAPPC11-207ENST00000511409 NKAPLQ5M9Q1 402 aa5.65□□□□□ -1.5
TRAPPC11-207ENST00000511409 TMC4Q7Z404 712 aa5.65□□□□□ -1.5
TRAPPC11-207ENST00000511409 FRMD6Q96NE9 622 aa5.65□□□□□ -1.5
TRAPPC11-207ENST00000511409 PPP4R2Q9NY27 417 aa5.65□□□□□ -1.5
TRAPPC11-207ENST00000511409 NAGPAQ9UK23 515 aa5.65□□□□□ -1.5
TRAPPC11-207ENST00000511409 A0A1W2PP55 124 aa5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 KIF4AO95239 1232 aa5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 FOXD4L6Q3SYB3 417 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 PEAR1Q5VY43 1037 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 PSAPL1Q6NUJ1 521 aa5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 NXPE4Q6UWF7 544 aa5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 FOXD4L3Q6VB84 417 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 LPIN3Q9BQK8 851 aa5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 BCO2Q9BYV7 579 aa5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 C12orf49Q9H741 205 aa5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 LIN7BQ9HAP6 207 aa5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 AK5Q9Y6K8 562 aa5.64□□□□□ -1.51
TRAPPC11-207ENST00000511409 GIPC1O14908 333 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 RGS9O75916 674 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 AFF1P51825 1210 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 ATP11AP98196 1134 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 GRM2Q14416 872 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 GRIK5Q16478 980 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 KIAA0319Q5VV43 1072 aa5.63□□□□□ -1.51
TRAPPC11-207ENST00000511409 CEP135Q66GS9 1140 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms