RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 LRRCC1Q9C099 1032 aa15.4■□□□□ 0.06
HMGB2-205ENST00000511316 STAP2Q9UGK3 403 aa15.4■□□□□ 0.06
HMGB2-205ENST00000511316 TAF1P21675 1872 aa15.4■□□□□ 0.06
HMGB2-205ENST00000511316 WDR33Q9C0J8 1336 aaKnown RBP15.4■□□□□ 0.06
HMGB2-205ENST00000511316 NEXNQ0ZGT2 675 aa15.4■□□□□ 0.06
HMGB2-205ENST00000511316 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
HMGB2-205ENST00000511316 ESYT1Q9BSJ8 1104 aa15.4■□□□□ 0.06
HMGB2-205ENST00000511316 FER1L6Q2WGJ9 1857 aa15.4■□□□□ 0.06
HMGB2-205ENST00000511316 C9orf131Q5VYM1 1079 aa15.39■□□□□ 0.05
HMGB2-205ENST00000511316 TTLL11Q8NHH1 800 aa15.39■□□□□ 0.05
HMGB2-205ENST00000511316 CELF1Q92879 486 aaKnown RBP15.39■□□□□ 0.05
HMGB2-205ENST00000511316 KAZALD1Q96I82 304 aa15.39■□□□□ 0.05
HMGB2-205ENST00000511316 TMX3Q96JJ7 454 aa15.39■□□□□ 0.05
HMGB2-205ENST00000511316 PLA2G12BQ9BX93 195 aa15.39■□□□□ 0.05
HMGB2-205ENST00000511316 SEC31BQ9NQW1 1179 aa15.39■□□□□ 0.05
HMGB2-205ENST00000511316 ATP6V1DQ9Y5K8 247 aa15.39■□□□□ 0.05
HMGB2-205ENST00000511316 PDE8AO60658 829 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 BBOX1O75936 387 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 UBE3BQ7Z3V4 1068 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 LTBP3Q9NS15 1303 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 DYNC1I1O14576 645 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 RAB11FIP3O75154 756 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 CSF1RP07333 972 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 MX1P20591 662 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 NEK4P51957 841 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 GRAPQ13588 217 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 GRAPLQ8TC17 118 aaPredicted RBP15.38■□□□□ 0.05
HMGB2-205ENST00000511316 MEIS3Q99687 375 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 TSPY26PQ9H489 355 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 ATP6V0A2Q9Y487 856 aa15.38■□□□□ 0.05
HMGB2-205ENST00000511316 FOXO4P98177 505 aa15.37■□□□□ 0.05
HMGB2-205ENST00000511316 EPHA10Q5JZY3 1008 aa15.37■□□□□ 0.05
HMGB2-205ENST00000511316 RBSNQ9H1K0 784 aa15.37■□□□□ 0.05
HMGB2-205ENST00000511316 UTYO14607 1347 aa15.37■□□□□ 0.05
HMGB2-205ENST00000511316 SALL3Q9BXA9 1300 aa15.37■□□□□ 0.05
HMGB2-205ENST00000511316 CACNA1SQ13698 1873 aa15.36■□□□□ 0.05
HMGB2-205ENST00000511316 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
HMGB2-205ENST00000511316 LMNB1P20700 586 aa15.36■□□□□ 0.05
HMGB2-205ENST00000511316 SLC4A10Q6U841 1118 aa15.36■□□□□ 0.05
HMGB2-205ENST00000511316 C16orf71Q8IYS4 520 aaPredicted RBP15.36■□□□□ 0.05
HMGB2-205ENST00000511316 TMEM87AQ8NBN3 555 aa15.36■□□□□ 0.05
HMGB2-205ENST00000511316 GPT2Q8TD30 523 aa15.36■□□□□ 0.05
HMGB2-205ENST00000511316 NBPF7P0C2Y1 421 aaPredicted RBP15.36■□□□□ 0.05
HMGB2-205ENST00000511316 CCDC93Q567U6 631 aa15.36■□□□□ 0.05
HMGB2-205ENST00000511316 DDX46Q7L014 1031 aaKnown RBP15.36■□□□□ 0.05
HMGB2-205ENST00000511316 SP8Q8IXZ3 490 aa15.36■□□□□ 0.05
HMGB2-205ENST00000511316 USP44Q9H0E7 712 aa15.36■□□□□ 0.05
HMGB2-205ENST00000511316 PPEF1O14829 653 aaPredicted RBP15.35■□□□□ 0.05
HMGB2-205ENST00000511316 TPM3P06753 285 aa15.35■□□□□ 0.05
HMGB2-205ENST00000511316 CTSWP56202 376 aa15.35■□□□□ 0.05
HMGB2-205ENST00000511316 RPS8P62241 208 aaKnown RBP15.35■□□□□ 0.05
HMGB2-205ENST00000511316 ATP8B2P98198 1209 aa15.35■□□□□ 0.05
HMGB2-205ENST00000511316 SOGA3Q5TF21 947 aa15.35■□□□□ 0.05
HMGB2-205ENST00000511316 RTKN2Q8IZC4 609 aa15.35■□□□□ 0.05
HMGB2-205ENST00000511316 CCDC85AQ96PX6 553 aaPredicted RBP15.35■□□□□ 0.05
HMGB2-205ENST00000511316 GREM2Q9H772 168 aa15.35■□□□□ 0.05
HMGB2-205ENST00000511316 ZDHHC9Q9Y397 364 aa15.35■□□□□ 0.05
HMGB2-205ENST00000511316 GRM8O00222 908 aa15.34■□□□□ 0.05
HMGB2-205ENST00000511316 FKBP4Q02790 459 aaKnown RBP eCLIP15.34■□□□□ 0.05
HMGB2-205ENST00000511316 HSP90AB4PQ58FF6 505 aa15.34■□□□□ 0.05
HMGB2-205ENST00000511316 CC2D2BQ6DHV5 1058 aa15.34■□□□□ 0.05
HMGB2-205ENST00000511316 SASS6Q6UVJ0 657 aa15.34■□□□□ 0.05
HMGB2-205ENST00000511316 ZGPATQ8N5A5 531 aaKnown RBP15.34■□□□□ 0.05
HMGB2-205ENST00000511316 PSMD1Q99460 953 aa15.34■□□□□ 0.05
HMGB2-205ENST00000511316 RTFDC1Q9BY42 306 aaPredicted RBP15.34■□□□□ 0.05
HMGB2-205ENST00000511316 TAOK3Q9H2K8 898 aa15.34■□□□□ 0.05
HMGB2-205ENST00000511316 RNF181Q9P0P0 153 aa15.34■□□□□ 0.05
HMGB2-205ENST00000511316 HDAC5Q9UQL6 1122 aa15.34■□□□□ 0.05
HMGB2-205ENST00000511316 HMGN5P82970 282 aaKnown RBP15.33■□□□□ 0.05
HMGB2-205ENST00000511316 ZNF277Q9NRM2 450 aaPredicted RBP15.33■□□□□ 0.05
HMGB2-205ENST00000511316 CHMLP26374 656 aa15.33■□□□□ 0.04
HMGB2-205ENST00000511316 KIAA2012Q0VF49 1180 aa15.33■□□□□ 0.04
HMGB2-205ENST00000511316 TMEM63CQ9P1W3 806 aa15.33■□□□□ 0.04
HMGB2-205ENST00000511316 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.33■□□□□ 0.04
HMGB2-205ENST00000511316 RTL9Q8NET4 1388 aa15.33■□□□□ 0.04
HMGB2-205ENST00000511316 COL4A5P29400 1685 aa15.33■□□□□ 0.04
HMGB2-205ENST00000511316 WTIPA6NIX2 430 aaPredicted RBP15.32■□□□□ 0.04
HMGB2-205ENST00000511316 HSP90B1P14625 803 aaKnown RBP15.32■□□□□ 0.04
HMGB2-205ENST00000511316 CCDC152Q4G0S7 254 aa15.32■□□□□ 0.04
HMGB2-205ENST00000511316 OTUD7AQ8TE49 926 aaPredicted RBP15.32■□□□□ 0.04
HMGB2-205ENST00000511316 AK9Q5TCS8 1911 aa15.32■□□□□ 0.04
HMGB2-205ENST00000511316 CCDC88AQ3V6T2 1871 aa15.32■□□□□ 0.04
HMGB2-205ENST00000511316 SYCE3A1L190 88 aa15.31■□□□□ 0.04
HMGB2-205ENST00000511316 SUCLG2Q96I99 432 aa15.31■□□□□ 0.04
HMGB2-205ENST00000511316 PRIMPOLQ96LW4 560 aa15.31■□□□□ 0.04
HMGB2-205ENST00000511316 SMARCA5O60264 1052 aaPredicted RBP15.31■□□□□ 0.04
HMGB2-205ENST00000511316 PTMAP06454 111 aaKnown RBP15.31■□□□□ 0.04
HMGB2-205ENST00000511316 HSPA4P34932 840 aa15.3■□□□□ 0.04
HMGB2-205ENST00000511316 PKP1Q13835 747 aa15.3■□□□□ 0.04
HMGB2-205ENST00000511316 GRIPAP1Q4V328 841 aa15.3■□□□□ 0.04
HMGB2-205ENST00000511316 CCDC183Q5T5S1 534 aa15.3■□□□□ 0.04
HMGB2-205ENST00000511316 ANO2Q9NQ90 1003 aa15.3■□□□□ 0.04
HMGB2-205ENST00000511316 POLLQ9UGP5 575 aa15.3■□□□□ 0.04
HMGB2-205ENST00000511316 DUOX1Q9NRD9 1551 aa15.3■□□□□ 0.04
HMGB2-205ENST00000511316 POTECB2RU33 542 aa15.29■□□□□ 0.04
HMGB2-205ENST00000511316 ITGA6P23229 1130 aa15.29■□□□□ 0.04
HMGB2-205ENST00000511316 GPSM2P81274 684 aa15.29■□□□□ 0.04
HMGB2-205ENST00000511316 RABL6Q3YEC7 729 aaPredicted RBP15.29■□□□□ 0.04
HMGB2-205ENST00000511316 LMBR1LQ6UX01 489 aa15.29■□□□□ 0.04
HMGB2-205ENST00000511316 TMC4Q7Z404 712 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms