RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 SNAP23O00161 211 aa6.76□□□□□ -1.33
PROM1-211ENST00000511153 C21orf2O43822 256 aa6.76□□□□□ -1.33
PROM1-211ENST00000511153 SLC34A2O95436 690 aa6.76□□□□□ -1.33
PROM1-211ENST00000511153 GNAI2P04899 355 aa6.76□□□□□ -1.33
PROM1-211ENST00000511153 ITGA6P23229 1130 aa6.76□□□□□ -1.33
PROM1-211ENST00000511153 TMEM132AQ24JP5 1023 aa6.76□□□□□ -1.33
PROM1-211ENST00000511153 ARSIQ5FYB1 569 aa6.76□□□□□ -1.33
PROM1-211ENST00000511153 TTLL11Q8NHH1 800 aa6.76□□□□□ -1.33
PROM1-211ENST00000511153 PUS3Q9BZE2 481 aaKnown RBP6.76□□□□□ -1.33
PROM1-211ENST00000511153 UTRNP46939 3433 aa6.76□□□□□ -1.33
PROM1-211ENST00000511153 SRGAP3O43295 1099 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 NEFLP07196 543 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 GNAI3P08754 354 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 SRGNP10124 158 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 MS4A1P11836 297 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 KCNA3P22001 575 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 PDE6BP35913 854 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 CCDC152Q4G0S7 254 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 DDX46Q7L014 1031 aaKnown RBP6.75□□□□□ -1.33
PROM1-211ENST00000511153 RBM17Q96I25 401 aaKnown RBP6.75□□□□□ -1.33
PROM1-211ENST00000511153 DDX19BQ9UMR2 479 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 PCDHB15Q9Y5E8 787 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 KIAA1551Q9HCM1 1747 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 RNF123Q5XPI4 1314 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 CDHR2Q9BYE9 1310 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 LRP5O75197 1615 aa6.75□□□□□ -1.33
PROM1-211ENST00000511153 PPEF1O14829 653 aaPredicted RBP6.74□□□□□ -1.33
PROM1-211ENST00000511153 TAF5LO75529 589 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 YBX3P16989 372 aaKnown RBP eCLIP6.74□□□□□ -1.33
PROM1-211ENST00000511153 IFIT5Q13325 482 aaKnown RBP6.74□□□□□ -1.33
PROM1-211ENST00000511153 GPR162Q16538 588 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 CCDC57Q2TAC2 916 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 LRRC24Q50LG9 513 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 SLC10A5Q5PT55 438 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 PRPF40BQ6NWY9 871 aaKnown RBP6.74□□□□□ -1.33
PROM1-211ENST00000511153 MAMSTRQ6ZN01 415 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 SIRT2Q8IXJ6 389 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 MASTLQ96GX5 879 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 ZBTB40Q9NUA8 1239 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 EXOC6BQ9Y2D4 811 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 CD2APQ9Y5K6 639 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 KIF13BQ9NQT8 1826 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 UTYO14607 1347 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 ANKRD18BA2A2Z9 1011 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 SPDYE16A6NNV3 312 aaPredicted RBP6.74□□□□□ -1.33
PROM1-211ENST00000511153 RIMBP2O15034 1052 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
PROM1-211ENST00000511153 NUDT7P0C024 238 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 NPR1P16066 1061 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 RASSF7Q02833 373 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 OS9Q13438 667 aaPredicted RBP6.74□□□□□ -1.33
PROM1-211ENST00000511153 CEP85Q6P2H3 762 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 ARHGAP27Q6ZUM4 889 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 SKAP1Q86WV1 359 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 ANKRD18AQ8IVF6 992 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 TTLL6Q8N841 843 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 CNNM1Q9NRU3 951 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 PIM2Q9P1W9 311 aa6.74□□□□□ -1.33
PROM1-211ENST00000511153 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.74□□□□□ -1.33
PROM1-211ENST00000511153 IBTKQ9P2D0 1353 aaPredicted RBP6.73□□□□□ -1.33
PROM1-211ENST00000511153 TBC1D12O60347 775 aa6.73□□□□□ -1.33
PROM1-211ENST00000511153 SURF6O75683 361 aaKnown RBP6.73□□□□□ -1.33
PROM1-211ENST00000511153 CSF1RP07333 972 aa6.73□□□□□ -1.33
PROM1-211ENST00000511153 RFX5P48382 616 aaPredicted RBP6.73□□□□□ -1.33
PROM1-211ENST00000511153 GPSM2P81274 684 aa6.73□□□□□ -1.33
PROM1-211ENST00000511153 GRAPQ13588 217 aa6.73□□□□□ -1.33
PROM1-211ENST00000511153 SF3B3Q15393 1217 aaKnown RBP6.73□□□□□ -1.33
PROM1-211ENST00000511153 DALRD3Q5D0E6 543 aaKnown RBP6.73□□□□□ -1.33
PROM1-211ENST00000511153 B4GALNT3Q6L9W6 998 aa6.73□□□□□ -1.33
PROM1-211ENST00000511153 GRAPLQ8TC17 118 aaPredicted RBP6.73□□□□□ -1.33
PROM1-211ENST00000511153 MPHOSPH8Q99549 860 aa6.73□□□□□ -1.33
PROM1-211ENST00000511153 IGHDP01880 384 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 KLRK1P26718 216 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 IGHMBP2P38935 993 aaKnown RBP6.72□□□□□ -1.33
PROM1-211ENST00000511153 TGFB2P61812 414 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 RPS8P62241 208 aaKnown RBP6.72□□□□□ -1.33
PROM1-211ENST00000511153 ATP8B2P98198 1209 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 PTPN12Q05209 780 aaKnown RBP6.72□□□□□ -1.33
PROM1-211ENST00000511153 CRY2Q49AN0 593 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 STYK1Q6J9G0 422 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 GPR153Q6NV75 609 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 LDHAL6AQ6ZMR3 332 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 PLA2G12BQ9BX93 195 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 IL1RAPL2Q9NP60 686 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 NSFL1CQ9UNZ2 370 aaKnown RBP6.72□□□□□ -1.33
PROM1-211ENST00000511153 DLEC1Q9Y238 1755 aa6.72□□□□□ -1.33
PROM1-211ENST00000511153 BRCA1P38398 1863 aaKnown RBP6.72□□□□□ -1.33
PROM1-211ENST00000511153 C6orf229H3BNL8 230 aa6.71□□□□□ -1.34
PROM1-211ENST00000511153 OSBPP22059 807 aa6.71□□□□□ -1.34
PROM1-211ENST00000511153 RABL6Q3YEC7 729 aaPredicted RBP6.71□□□□□ -1.34
PROM1-211ENST00000511153 METTL24Q5JXM2 366 aa6.71□□□□□ -1.34
PROM1-211ENST00000511153 CNKSR1Q969H4 720 aa6.71□□□□□ -1.34
PROM1-211ENST00000511153 CDC5LQ99459 802 aaKnown RBP6.71□□□□□ -1.34
PROM1-211ENST00000511153 ZNF277Q9NRM2 450 aaPredicted RBP6.71□□□□□ -1.34
PROM1-211ENST00000511153 ANKIB1Q9P2G1 1089 aa6.71□□□□□ -1.34
PROM1-211ENST00000511153 JAG2Q9Y219 1238 aa6.71□□□□□ -1.34
PROM1-211ENST00000511153 CCDC88AQ3V6T2 1871 aa6.7□□□□□ -1.34
PROM1-211ENST00000511153 KLRG2A4D1S0 409 aaPredicted RBP6.7□□□□□ -1.34
PROM1-211ENST00000511153 UFL1O94874 794 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms