RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
DHFR-205ENST00000511032 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
DHFR-205ENST00000511032 GRAPQ13588 217 aa12.86□□□□□ -0.35
DHFR-205ENST00000511032 RABEP1Q15276 862 aa12.86□□□□□ -0.35
DHFR-205ENST00000511032 CAVIN4Q5BKX8 364 aa12.86□□□□□ -0.35
DHFR-205ENST00000511032 COL23A1Q86Y22 540 aaPredicted RBP12.86□□□□□ -0.35
DHFR-205ENST00000511032 GRAPLQ8TC17 118 aaPredicted RBP12.86□□□□□ -0.35
DHFR-205ENST00000511032 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 FGFR2P21802 821 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
DHFR-205ENST00000511032 SLC15A2Q16348 729 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 TMC4Q7Z404 712 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 VPS37DQ86XT2 251 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 TMX4Q9H1E5 349 aaPredicted RBP12.85□□□□□ -0.35
DHFR-205ENST00000511032 POLRMTO00411 1230 aaKnown RBP12.85□□□□□ -0.35
DHFR-205ENST00000511032 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 ADORA1P30542 326 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 PDE6BP35913 854 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 CCDC102BQ68D86 513 aa12.85□□□□□ -0.35
DHFR-205ENST00000511032 HELBQ8NG08 1087 aaPredicted RBP12.85□□□□□ -0.35
DHFR-205ENST00000511032 PNPLA7Q6ZV29 1317 aa12.84□□□□□ -0.35
DHFR-205ENST00000511032 TNRC6CQ9HCJ0 1690 aaKnown RBP12.84□□□□□ -0.35
DHFR-205ENST00000511032 ST18O60284 1047 aa12.84□□□□□ -0.35
DHFR-205ENST00000511032 ARID4AP29374 1257 aaPredicted RBP12.84□□□□□ -0.35
DHFR-205ENST00000511032 NMIQ13287 307 aaPredicted RBP12.84□□□□□ -0.35
DHFR-205ENST00000511032 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
DHFR-205ENST00000511032 CELF1Q92879 486 aaKnown RBP12.84□□□□□ -0.35
DHFR-205ENST00000511032 BRIP1Q9BX63 1249 aa12.84□□□□□ -0.35
DHFR-205ENST00000511032 HELLSQ9NRZ9 838 aa12.84□□□□□ -0.35
DHFR-205ENST00000511032 MINPP1Q9UNW1 487 aa12.84□□□□□ -0.35
DHFR-205ENST00000511032 A0A1B0GUL6 1792 aa12.83□□□□□ -0.36
DHFR-205ENST00000511032 TAF5LO75529 589 aa12.83□□□□□ -0.36
DHFR-205ENST00000511032 BBOX1O75936 387 aa12.83□□□□□ -0.36
DHFR-205ENST00000511032 DDR1Q08345 913 aa12.83□□□□□ -0.36
DHFR-205ENST00000511032 CRY2Q49AN0 593 aa12.83□□□□□ -0.36
DHFR-205ENST00000511032 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
DHFR-205ENST00000511032 C3orf67Q6ZVT6 689 aa12.83□□□□□ -0.36
DHFR-205ENST00000511032 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
DHFR-205ENST00000511032 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
DHFR-205ENST00000511032 SEMA3EO15041 775 aa12.82□□□□□ -0.36
DHFR-205ENST00000511032 MMP10P09238 476 aa12.82□□□□□ -0.36
DHFR-205ENST00000511032 ZKSCAN1P17029 563 aaPredicted RBP12.82□□□□□ -0.36
DHFR-205ENST00000511032 SNX21Q969T3 373 aa12.82□□□□□ -0.36
DHFR-205ENST00000511032 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
DHFR-205ENST00000511032 SNRKQ9NRH2 765 aa12.82□□□□□ -0.36
DHFR-205ENST00000511032 LEMD3Q9Y2U8 911 aa12.82□□□□□ -0.36
DHFR-205ENST00000511032 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
DHFR-205ENST00000511032 RNF113AO15541 343 aaKnown RBP12.81□□□□□ -0.36
DHFR-205ENST00000511032 FRAT2O75474 233 aaPredicted RBP12.81□□□□□ -0.36
DHFR-205ENST00000511032 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
DHFR-205ENST00000511032 HOXA10P31260 410 aaPredicted RBP12.81□□□□□ -0.36
DHFR-205ENST00000511032 PHKA1P46020 1223 aa12.81□□□□□ -0.36
DHFR-205ENST00000511032 MCM2P49736 904 aa12.81□□□□□ -0.36
DHFR-205ENST00000511032 MAP3K12Q12852 859 aa12.81□□□□□ -0.36
DHFR-205ENST00000511032 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
DHFR-205ENST00000511032 WASHC4Q2M389 1173 aa12.81□□□□□ -0.36
DHFR-205ENST00000511032 ANKIB1Q9P2G1 1089 aa12.81□□□□□ -0.36
DHFR-205ENST00000511032 XDHP47989 1333 aa12.81□□□□□ -0.36
DHFR-205ENST00000511032 CCDC171Q6TFL3 1326 aa12.81□□□□□ -0.36
DHFR-205ENST00000511032 EP400Q96L91 3159 aa12.81□□□□□ -0.36
DHFR-205ENST00000511032 MYH7P12883 1935 aa12.81□□□□□ -0.36
DHFR-205ENST00000511032 NPR1P16066 1061 aa12.8□□□□□ -0.36
DHFR-205ENST00000511032 HSPA4P34932 840 aa12.8□□□□□ -0.36
DHFR-205ENST00000511032 MCAMP43121 646 aa12.8□□□□□ -0.36
DHFR-205ENST00000511032 ZAP70P43403 619 aa12.8□□□□□ -0.36
DHFR-205ENST00000511032 SPATA5Q8NB90 893 aa12.8□□□□□ -0.36
DHFR-205ENST00000511032 SLC16A10Q8TF71 515 aa12.8□□□□□ -0.36
DHFR-205ENST00000511032 EDC3Q96F86 508 aaKnown RBP12.8□□□□□ -0.36
DHFR-205ENST00000511032 FAM227BQ96M60 508 aa12.8□□□□□ -0.36
DHFR-205ENST00000511032 LSG1Q9H089 658 aaKnown RBP12.8□□□□□ -0.36
DHFR-205ENST00000511032 DENND2AQ9ULE3 1009 aa12.8□□□□□ -0.36
DHFR-205ENST00000511032 ZNF804BA4D1E1 1349 aa12.8□□□□□ -0.36
DHFR-205ENST00000511032 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
DHFR-205ENST00000511032 A0A0D9SFI3 127 aa12.79□□□□□ -0.36
DHFR-205ENST00000511032 KLRG2A4D1S0 409 aaPredicted RBP12.79□□□□□ -0.36
DHFR-205ENST00000511032 IGSF3O75054 1194 aa12.79□□□□□ -0.36
DHFR-205ENST00000511032 HSP90AA1P07900 732 aaKnown RBP12.79□□□□□ -0.36
DHFR-205ENST00000511032 ATP2B4P23634 1241 aa12.79□□□□□ -0.36
DHFR-205ENST00000511032 APPBP2Q92624 585 aa12.79□□□□□ -0.36
DHFR-205ENST00000511032 HMG20BQ9P0W2 317 aa12.79□□□□□ -0.36
DHFR-205ENST00000511032 TAF1P21675 1872 aa12.79□□□□□ -0.36
DHFR-205ENST00000511032 IDH1O75874 414 aaKnown RBP12.78□□□□□ -0.36
DHFR-205ENST00000511032 KRT32Q14532 448 aa12.78□□□□□ -0.36
DHFR-205ENST00000511032 ZMYM1Q5SVZ6 1142 aa12.78□□□□□ -0.36
DHFR-205ENST00000511032 TMED8Q6PL24 325 aaPredicted RBP12.78□□□□□ -0.36
DHFR-205ENST00000511032 NDUFB9Q9Y6M9 179 aa12.78□□□□□ -0.36
DHFR-205ENST00000511032 AKAP11Q9UKA4 1901 aa12.78□□□□□ -0.36
DHFR-205ENST00000511032 PDS5AQ29RF7 1337 aaKnown RBP12.78□□□□□ -0.36
DHFR-205ENST00000511032 PSMA5P28066 241 aa12.78□□□□□ -0.36
DHFR-205ENST00000511032 HIBADHP31937 336 aaKnown RBP12.78□□□□□ -0.36
DHFR-205ENST00000511032 SCARF1Q14162 830 aa12.78□□□□□ -0.36
DHFR-205ENST00000511032 UBE3CQ15386 1083 aa12.78□□□□□ -0.36
DHFR-205ENST00000511032 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
DHFR-205ENST00000511032 ZNF804AQ7Z570 1209 aa12.78□□□□□ -0.36
DHFR-205ENST00000511032 ZGPATQ8N5A5 531 aaKnown RBP12.78□□□□□ -0.36
DHFR-205ENST00000511032 MAP4K1Q92918 833 aa12.78□□□□□ -0.36
DHFR-205ENST00000511032 MASTLQ96GX5 879 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms