RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 H7C1D1 291 aa18.3■□□□□ 0.52
COL12A1-210ENST00000511023 RSBN1LQ6PCB5 846 aaPredicted RBP18.3■□□□□ 0.52
COL12A1-210ENST00000511023 GMLQ99445 158 aa18.3■□□□□ 0.52
COL12A1-210ENST00000511023 COA1Q9GZY4 146 aa18.3■□□□□ 0.52
COL12A1-210ENST00000511023 CNNM1Q9NRU3 951 aa18.3■□□□□ 0.52
COL12A1-210ENST00000511023 CREBZFQ9NS37 354 aa18.3■□□□□ 0.52
COL12A1-210ENST00000511023 TNNQ9UQP3 1299 aa18.3■□□□□ 0.52
COL12A1-210ENST00000511023 KIF16BQ96L93 1317 aa18.29■□□□□ 0.52
COL12A1-210ENST00000511023 USP17L3A6NCW0 530 aa18.29■□□□□ 0.52
COL12A1-210ENST00000511023 USP17L4A6NCW7 530 aa18.29■□□□□ 0.52
COL12A1-210ENST00000511023 KCNJ4P48050 445 aa18.29■□□□□ 0.52
COL12A1-210ENST00000511023 TBC1D10BQ4KMP7 808 aaPredicted RBP18.29■□□□□ 0.52
COL12A1-210ENST00000511023 USP17L1Q7RTZ2 530 aa18.29■□□□□ 0.52
COL12A1-210ENST00000511023 ARHGAP45Q92619 1136 aa18.29■□□□□ 0.52
COL12A1-210ENST00000511023 MXD3Q9BW11 206 aa18.29■□□□□ 0.52
COL12A1-210ENST00000511023 TRAF5O00463 557 aa18.28■□□□□ 0.52
COL12A1-210ENST00000511023 PLIN1O60240 522 aa18.28■□□□□ 0.52
COL12A1-210ENST00000511023 DACT2Q5SW24 774 aa18.28■□□□□ 0.52
COL12A1-210ENST00000511023 C15orf52Q6ZUT6 534 aaKnown RBP18.28■□□□□ 0.52
COL12A1-210ENST00000511023 RIPOR2Q9Y4F9 1068 aa18.28■□□□□ 0.52
COL12A1-210ENST00000511023 TRIM27P14373 513 aa18.27■□□□□ 0.52
COL12A1-210ENST00000511023 ZNF280AP59817 542 aaPredicted RBP18.27■□□□□ 0.52
COL12A1-210ENST00000511023 LRRC24Q50LG9 513 aa18.27■□□□□ 0.52
COL12A1-210ENST00000511023 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.52
COL12A1-210ENST00000511023 AGBL3Q8NEM8 1001 aa18.27■□□□□ 0.52
COL12A1-210ENST00000511023 KLHDC4Q8TBB5 520 aa18.27■□□□□ 0.52
COL12A1-210ENST00000511023 ZC3H15Q8WU90 426 aaKnown RBP18.27■□□□□ 0.52
COL12A1-210ENST00000511023 GLIS2Q9BZE0 524 aaPredicted RBP18.27■□□□□ 0.52
COL12A1-210ENST00000511023 TMEM88BA6NKF7 163 aa18.26■□□□□ 0.51
COL12A1-210ENST00000511023 RFX5P48382 616 aaPredicted RBP18.26■□□□□ 0.51
COL12A1-210ENST00000511023 RBM26Q5T8P6 1007 aaKnown RBP18.26■□□□□ 0.51
COL12A1-210ENST00000511023 JMYQ8N9B5 988 aa18.26■□□□□ 0.51
COL12A1-210ENST00000511023 MEIS3Q99687 375 aa18.26■□□□□ 0.51
COL12A1-210ENST00000511023 CD209Q9NNX6 404 aa18.26■□□□□ 0.51
COL12A1-210ENST00000511023 UBTFL1P0CB47 393 aaPredicted RBP18.25■□□□□ 0.51
COL12A1-210ENST00000511023 STRIP1Q5VSL9 837 aa18.25■□□□□ 0.51
COL12A1-210ENST00000511023 ASTN2O75129 1339 aaPredicted RBP18.24■□□□□ 0.51
COL12A1-210ENST00000511023 KIF4BQ2VIQ3 1234 aa18.24■□□□□ 0.51
COL12A1-210ENST00000511023 CST9Q5W186 159 aa18.24■□□□□ 0.51
COL12A1-210ENST00000511023 DLK2Q6UY11 383 aa18.24■□□□□ 0.51
COL12A1-210ENST00000511023 ATF7IPQ6VMQ6 1270 aa18.24■□□□□ 0.51
COL12A1-210ENST00000511023 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
COL12A1-210ENST00000511023 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
COL12A1-210ENST00000511023 MKRN1Q9UHC7 482 aaKnown RBP18.24■□□□□ 0.51
COL12A1-210ENST00000511023 LRRFIP2Q9Y608 721 aaKnown RBP18.24■□□□□ 0.51
COL12A1-210ENST00000511023 CNTNAP1P78357 1384 aa18.23■□□□□ 0.51
COL12A1-210ENST00000511023 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
COL12A1-210ENST00000511023 USP17L8P0C7I0 530 aa18.23■□□□□ 0.51
COL12A1-210ENST00000511023 GTF2IP78347 998 aa18.23■□□□□ 0.51
COL12A1-210ENST00000511023 UBE4AQ14139 1066 aa18.23■□□□□ 0.51
COL12A1-210ENST00000511023 TTLL5Q6EMB2 1281 aa18.23■□□□□ 0.51
COL12A1-210ENST00000511023 VGLL2Q8N8G2 317 aa18.23■□□□□ 0.51
COL12A1-210ENST00000511023 MROH5Q6ZUA9 1318 aa18.23■□□□□ 0.51
COL12A1-210ENST00000511023 TRPM7Q96QT4 1865 aa18.22■□□□□ 0.51
COL12A1-210ENST00000511023 IL1R1P14778 569 aa18.22■□□□□ 0.51
COL12A1-210ENST00000511023 PTPN12Q05209 780 aaKnown RBP18.22■□□□□ 0.51
COL12A1-210ENST00000511023 USP48Q86UV5 1035 aa18.22■□□□□ 0.51
COL12A1-210ENST00000511023 CLUAP1Q96AJ1 413 aa18.22■□□□□ 0.51
COL12A1-210ENST00000511023 METTL24Q5JXM2 366 aa18.21■□□□□ 0.51
COL12A1-210ENST00000511023 CDC37L1Q7L3B6 337 aa18.21■□□□□ 0.51
COL12A1-210ENST00000511023 ZNF804AQ7Z570 1209 aa18.21■□□□□ 0.51
COL12A1-210ENST00000511023 CERS5Q8N5B7 392 aa18.21■□□□□ 0.51
COL12A1-210ENST00000511023 MYOZ2Q9NPC6 264 aa18.21■□□□□ 0.51
COL12A1-210ENST00000511023 POLR2AP24928 1970 aaKnown RBP18.21■□□□□ 0.5
COL12A1-210ENST00000511023 GYG1P46976 350 aa18.2■□□□□ 0.5
COL12A1-210ENST00000511023 SCARF1Q14162 830 aa18.2■□□□□ 0.5
COL12A1-210ENST00000511023 ATG9AQ7Z3C6 839 aa18.2■□□□□ 0.5
COL12A1-210ENST00000511023 FAM84BQ96KN1 310 aaPredicted RBP18.2■□□□□ 0.5
COL12A1-210ENST00000511023 GGA3Q9NZ52 723 aa18.2■□□□□ 0.5
COL12A1-210ENST00000511023 MYO3BQ8WXR4 1341 aa18.2■□□□□ 0.5
COL12A1-210ENST00000511023 RASSF10A6NK89 507 aa18.19■□□□□ 0.5
COL12A1-210ENST00000511023 ADM5C9JUS6 153 aa18.19■□□□□ 0.5
COL12A1-210ENST00000511023 EYA2O00167 538 aa18.19■□□□□ 0.5
COL12A1-210ENST00000511023 PDE8BO95263 885 aa18.19■□□□□ 0.5
COL12A1-210ENST00000511023 ZKSCAN2Q63HK3 967 aa18.19■□□□□ 0.5
COL12A1-210ENST00000511023 KRT26Q7Z3Y9 468 aa18.19■□□□□ 0.5
COL12A1-210ENST00000511023 JAG2Q9Y219 1238 aa18.19■□□□□ 0.5
COL12A1-210ENST00000511023 CELF2O95319 508 aaKnown RBP18.18■□□□□ 0.5
COL12A1-210ENST00000511023 GNAI3P08754 354 aa18.18■□□□□ 0.5
COL12A1-210ENST00000511023 VEGFBP49765 207 aa18.18■□□□□ 0.5
COL12A1-210ENST00000511023 KIAA0825Q8IV33 1275 aa18.18■□□□□ 0.5
COL12A1-210ENST00000511023 TMEM57Q8N5G2 664 aa18.18■□□□□ 0.5
COL12A1-210ENST00000511023 TDRD7Q8NHU6 1098 aaKnown RBP18.18■□□□□ 0.5
COL12A1-210ENST00000511023 DCPSQ96C86 337 aaKnown RBP18.18■□□□□ 0.5
COL12A1-210ENST00000511023 ABT1Q9ULW3 272 aaKnown RBP18.18■□□□□ 0.5
COL12A1-210ENST00000511023 FGFR2P21802 821 aa18.17■□□□□ 0.5
COL12A1-210ENST00000511023 HIBADHP31937 336 aaKnown RBP18.17■□□□□ 0.5
COL12A1-210ENST00000511023 NBPF9Q3BBW0 867 aa18.17■□□□□ 0.5
COL12A1-210ENST00000511023 ANGEL2Q5VTE6 544 aaKnown RBP18.17■□□□□ 0.5
COL12A1-210ENST00000511023 FBXO33Q7Z6M2 555 aa18.17■□□□□ 0.5
COL12A1-210ENST00000511023 SIL1Q9H173 461 aa18.17■□□□□ 0.5
COL12A1-210ENST00000511023 PA2G4Q9UQ80 394 aaKnown RBP18.17■□□□□ 0.5
COL12A1-210ENST00000511023 SASH1O94885 1247 aa18.16■□□□□ 0.5
COL12A1-210ENST00000511023 DEFB115Q30KQ5 88 aa18.16■□□□□ 0.5
COL12A1-210ENST00000511023 OGFOD1Q8N543 542 aa18.16■□□□□ 0.5
COL12A1-210ENST00000511023 ZBED3Q96IU2 234 aaPredicted RBP18.16■□□□□ 0.5
COL12A1-210ENST00000511023 ZNF408Q9H9D4 720 aa18.16■□□□□ 0.5
COL12A1-210ENST00000511023 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
COL12A1-210ENST00000511023 TLL2Q9Y6L7 1015 aa18.16■□□□□ 0.5
COL12A1-210ENST00000511023 FAM205AQ6ZU69 1335 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms