RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 MED23Q9ULK4 1368 aa19.47■□□□□ 0.71
SH3TC1-220ENST00000511002 CNTROBQ8N137 903 aa19.47■□□□□ 0.71
SH3TC1-220ENST00000511002 ANKRD44Q8N8A2 993 aa19.47■□□□□ 0.71
SH3TC1-220ENST00000511002 ADARB2Q9NS39 739 aaKnown RBP19.47■□□□□ 0.71
SH3TC1-220ENST00000511002 CNOT7Q9UIV1 285 aaKnown RBP19.47■□□□□ 0.71
SH3TC1-220ENST00000511002 LRRFIP2Q9Y608 721 aaKnown RBP19.47■□□□□ 0.71
SH3TC1-220ENST00000511002 TAF5LO75529 589 aa19.46■□□□□ 0.71
SH3TC1-220ENST00000511002 EGFRP00533 1210 aa19.46■□□□□ 0.71
SH3TC1-220ENST00000511002 GNAI3P08754 354 aa19.46■□□□□ 0.71
SH3TC1-220ENST00000511002 USP50Q70EL3 339 aaPredicted RBP19.46■□□□□ 0.71
SH3TC1-220ENST00000511002 MICALL2Q8IY33 904 aa19.46■□□□□ 0.71
SH3TC1-220ENST00000511002 G3V3G9 751 aa19.45■□□□□ 0.7
SH3TC1-220ENST00000511002 ZBTB7BO15156 539 aaPredicted RBP19.45■□□□□ 0.7
SH3TC1-220ENST00000511002 VIL1P09327 827 aaKnown RBP19.45■□□□□ 0.7
SH3TC1-220ENST00000511002 DCAF8Q5TAQ9 597 aa19.45■□□□□ 0.7
SH3TC1-220ENST00000511002 KLRG1Q96E93 195 aa19.45■□□□□ 0.7
SH3TC1-220ENST00000511002 LEMD3Q9Y2U8 911 aa19.45■□□□□ 0.7
SH3TC1-220ENST00000511002 ZNF804BA4D1E1 1349 aa19.45■□□□□ 0.7
SH3TC1-220ENST00000511002 IRS2Q9Y4H2 1338 aa19.45■□□□□ 0.7
SH3TC1-220ENST00000511002 CCDC57Q2TAC2 916 aa19.44■□□□□ 0.7
SH3TC1-220ENST00000511002 RABL6Q3YEC7 729 aaPredicted RBP19.44■□□□□ 0.7
SH3TC1-220ENST00000511002 SAMD7Q7Z3H4 446 aa19.44■□□□□ 0.7
SH3TC1-220ENST00000511002 PUS3Q9BZE2 481 aaKnown RBP19.44■□□□□ 0.7
SH3TC1-220ENST00000511002 C1orf115Q9H7X2 142 aa19.44■□□□□ 0.7
SH3TC1-220ENST00000511002 TRAF5O00463 557 aa19.43■□□□□ 0.7
SH3TC1-220ENST00000511002 DPF2Q92785 391 aa19.43■□□□□ 0.7
SH3TC1-220ENST00000511002 MXD3Q9BW11 206 aa19.43■□□□□ 0.7
SH3TC1-220ENST00000511002 ANKRD2Q9GZV1 360 aa19.43■□□□□ 0.7
SH3TC1-220ENST00000511002 DDX19BQ9UMR2 479 aa19.43■□□□□ 0.7
SH3TC1-220ENST00000511002 GNAI2P04899 355 aa19.42■□□□□ 0.7
SH3TC1-220ENST00000511002 TBC1D10BQ4KMP7 808 aaPredicted RBP19.42■□□□□ 0.7
SH3TC1-220ENST00000511002 TAF7LQ5H9L4 462 aa19.42■□□□□ 0.7
SH3TC1-220ENST00000511002 LDHAL6AQ6ZMR3 332 aa19.42■□□□□ 0.7
SH3TC1-220ENST00000511002 POLR2AP24928 1970 aaKnown RBP19.41■□□□□ 0.7
SH3TC1-220ENST00000511002 H7C1D1 291 aa19.41■□□□□ 0.7
SH3TC1-220ENST00000511002 RSBN1LQ6PCB5 846 aaPredicted RBP19.41■□□□□ 0.7
SH3TC1-220ENST00000511002 CRBNQ96SW2 442 aa19.41■□□□□ 0.7
SH3TC1-220ENST00000511002 GLIS2Q9BZE0 524 aaPredicted RBP19.41■□□□□ 0.7
SH3TC1-220ENST00000511002 CNNM1Q9NRU3 951 aa19.41■□□□□ 0.7
SH3TC1-220ENST00000511002 CREBZFQ9NS37 354 aa19.41■□□□□ 0.7
SH3TC1-220ENST00000511002 USP17L3A6NCW0 530 aa19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 USP17L4A6NCW7 530 aa19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 RPS12P25398 132 aaKnown RBP19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 KCNJ4P48050 445 aa19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 RBM26Q5T8P6 1007 aaKnown RBP19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 DLK2Q6UY11 383 aa19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 USP17L1Q7RTZ2 530 aa19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 PODNQ7Z5L7 613 aa19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 KLHDC4Q8TBB5 520 aa19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 GMLQ99445 158 aa19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 ASTN2O75129 1339 aaPredicted RBP19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 ZNF609O15014 1411 aa19.4■□□□□ 0.7
SH3TC1-220ENST00000511002 TRPM7Q96QT4 1865 aa19.39■□□□□ 0.7
SH3TC1-220ENST00000511002 LRRC24Q50LG9 513 aa19.39■□□□□ 0.69
SH3TC1-220ENST00000511002 COA1Q9GZY4 146 aa19.39■□□□□ 0.69
SH3TC1-220ENST00000511002 ZBTB40Q9NUA8 1239 aa19.39■□□□□ 0.69
SH3TC1-220ENST00000511002 MKRN1Q9UHC7 482 aaKnown RBP19.39■□□□□ 0.69
SH3TC1-220ENST00000511002 PGAP2Q9UHJ9 254 aa19.39■□□□□ 0.69
SH3TC1-220ENST00000511002 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
SH3TC1-220ENST00000511002 DACT2Q5SW24 774 aa19.38■□□□□ 0.69
SH3TC1-220ENST00000511002 FBXW7Q969H0 707 aa19.38■□□□□ 0.69
SH3TC1-220ENST00000511002 RIPOR2Q9Y4F9 1068 aa19.38■□□□□ 0.69
SH3TC1-220ENST00000511002 TMEM88BA6NKF7 163 aa19.37■□□□□ 0.69
SH3TC1-220ENST00000511002 RFX5P48382 616 aaPredicted RBP19.37■□□□□ 0.69
SH3TC1-220ENST00000511002 KIF4BQ2VIQ3 1234 aa19.37■□□□□ 0.69
SH3TC1-220ENST00000511002 C15orf52Q6ZUT6 534 aaKnown RBP19.37■□□□□ 0.69
SH3TC1-220ENST00000511002 AGBL3Q8NEM8 1001 aa19.37■□□□□ 0.69
SH3TC1-220ENST00000511002 CD209Q9NNX6 404 aa19.37■□□□□ 0.69
SH3TC1-220ENST00000511002 IRX6P78412 446 aaPredicted RBP19.36■□□□□ 0.69
SH3TC1-220ENST00000511002 MTX1Q13505 466 aa19.36■□□□□ 0.69
SH3TC1-220ENST00000511002 CST9Q5W186 159 aa19.36■□□□□ 0.69
SH3TC1-220ENST00000511002 JMYQ8N9B5 988 aa19.36■□□□□ 0.69
SH3TC1-220ENST00000511002 PNMA6EA0A0J9YXQ4 647 aa19.35■□□□□ 0.69
SH3TC1-220ENST00000511002 ZNF280AP59817 542 aaPredicted RBP19.35■□□□□ 0.69
SH3TC1-220ENST00000511002 GTF2IP78347 998 aa19.35■□□□□ 0.69
SH3TC1-220ENST00000511002 STRIP1Q5VSL9 837 aa19.35■□□□□ 0.69
SH3TC1-220ENST00000511002 ZC3H15Q8WU90 426 aaKnown RBP19.35■□□□□ 0.69
SH3TC1-220ENST00000511002 CNTNAP1P78357 1384 aa19.34■□□□□ 0.69
SH3TC1-220ENST00000511002 SRGAP3O43295 1099 aa19.34■□□□□ 0.69
SH3TC1-220ENST00000511002 CEP85Q6P2H3 762 aa19.34■□□□□ 0.69
SH3TC1-220ENST00000511002 CHMP4BQ9H444 224 aaKnown RBP19.34■□□□□ 0.69
SH3TC1-220ENST00000511002 ADM5C9JUS6 153 aa19.33■□□□□ 0.68
SH3TC1-220ENST00000511002 USP17L8P0C7I0 530 aa19.33■□□□□ 0.68
SH3TC1-220ENST00000511002 TTLL5Q6EMB2 1281 aa19.33■□□□□ 0.68
SH3TC1-220ENST00000511002 USP48Q86UV5 1035 aa19.33■□□□□ 0.68
SH3TC1-220ENST00000511002 CERS5Q8N5B7 392 aa19.33■□□□□ 0.68
SH3TC1-220ENST00000511002 VGLL2Q8N8G2 317 aa19.33■□□□□ 0.68
SH3TC1-220ENST00000511002 GGA3Q9NZ52 723 aa19.33■□□□□ 0.68
SH3TC1-220ENST00000511002 JAG2Q9Y219 1238 aa19.33■□□□□ 0.68
SH3TC1-220ENST00000511002 GYG1P46976 350 aa19.32■□□□□ 0.68
SH3TC1-220ENST00000511002 PTPN12Q05209 780 aaKnown RBP19.32■□□□□ 0.68
SH3TC1-220ENST00000511002 EXOC6Q8TAG9 804 aa19.32■□□□□ 0.68
SH3TC1-220ENST00000511002 MYOZ2Q9NPC6 264 aa19.32■□□□□ 0.68
SH3TC1-220ENST00000511002 PA2G4Q9UQ80 394 aaKnown RBP19.32■□□□□ 0.68
SH3TC1-220ENST00000511002 MROH5Q6ZUA9 1318 aa19.31■□□□□ 0.68
SH3TC1-220ENST00000511002 CELF2O95319 508 aaKnown RBP19.31■□□□□ 0.68
SH3TC1-220ENST00000511002 IL1R1P14778 569 aa19.31■□□□□ 0.68
SH3TC1-220ENST00000511002 ATP8B2P98198 1209 aa19.31■□□□□ 0.68
SH3TC1-220ENST00000511002 UBE4AQ14139 1066 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms