RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 ZIC5Q96T25 663 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 MPHOSPH8Q99549 860 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 PLA2G12BQ9BX93 195 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 MYH16Q9H6N6 1097 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 MYOZ2Q9NPC6 264 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 GGA3Q9NZ52 723 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 LEMD3Q9Y2U8 911 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 FANCIQ9NVI1 1328 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 SCN9AQ15858 1988 aa11.05□□□□□ -0.64
PDGFC-206ENST00000510982 CSF1RP07333 972 aa11.05□□□□□ -0.64
PDGFC-206ENST00000510982 ZNF157P51786 506 aaPredicted RBP11.05□□□□□ -0.64
PDGFC-206ENST00000510982 CACNB1Q02641 598 aaPredicted RBP11.05□□□□□ -0.64
PDGFC-206ENST00000510982 CCDC102AQ96A19 550 aa11.05□□□□□ -0.64
PDGFC-206ENST00000510982 ABHD8Q96I13 439 aa11.05□□□□□ -0.64
PDGFC-206ENST00000510982 GMLQ99445 158 aa11.05□□□□□ -0.64
PDGFC-206ENST00000510982 ANKRD2Q9GZV1 360 aa11.05□□□□□ -0.64
PDGFC-206ENST00000510982 COA1Q9GZY4 146 aa11.05□□□□□ -0.64
PDGFC-206ENST00000510982 KCNJ4P48050 445 aa11.04□□□□□ -0.64
PDGFC-206ENST00000510982 CASP7P55210 303 aa11.04□□□□□ -0.64
PDGFC-206ENST00000510982 TXNRD3Q86VQ6 643 aa11.04□□□□□ -0.64
PDGFC-206ENST00000510982 FAM9BQ8IZU0 186 aa11.04□□□□□ -0.64
PDGFC-206ENST00000510982 OGFOD1Q8N543 542 aa11.04□□□□□ -0.64
PDGFC-206ENST00000510982 CDCA5Q96FF9 252 aa11.04□□□□□ -0.64
PDGFC-206ENST00000510982 MXD3Q9BW11 206 aa11.04□□□□□ -0.64
PDGFC-206ENST00000510982 ZNF804BA4D1E1 1349 aa11.04□□□□□ -0.64
PDGFC-206ENST00000510982 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
PDGFC-206ENST00000510982 ANKRD18BA2A2Z9 1011 aa11.03□□□□□ -0.64
PDGFC-206ENST00000510982 FAM155AB1AL88 458 aaPredicted RBP11.03□□□□□ -0.64
PDGFC-206ENST00000510982 F6X3S4 739 aa11.03□□□□□ -0.64
PDGFC-206ENST00000510982 KIF23Q02241 960 aaPredicted RBP11.03□□□□□ -0.64
PDGFC-206ENST00000510982 FAM161AQ3B820 660 aa11.03□□□□□ -0.64
PDGFC-206ENST00000510982 DACT2Q5SW24 774 aa11.03□□□□□ -0.64
PDGFC-206ENST00000510982 STRIP1Q5VSL9 837 aa11.03□□□□□ -0.64
PDGFC-206ENST00000510982 TTLL5Q6EMB2 1281 aa11.03□□□□□ -0.64
PDGFC-206ENST00000510982 SPINK5Q9NQ38 1064 aaPredicted RBP11.03□□□□□ -0.64
PDGFC-206ENST00000510982 SCAF8Q9UPN6 1271 aaKnown RBP11.03□□□□□ -0.64
PDGFC-206ENST00000510982 CHMP3Q9Y3E7 222 aa11.03□□□□□ -0.64
PDGFC-206ENST00000510982 CCDC85CA6NKD9 419 aa11.02□□□□□ -0.65
PDGFC-206ENST00000510982 CHRNDQ07001 517 aa11.02□□□□□ -0.65
PDGFC-206ENST00000510982 IFIT5Q13325 482 aaKnown RBP11.02□□□□□ -0.65
PDGFC-206ENST00000510982 NBPF9Q3BBW0 867 aa11.02□□□□□ -0.65
PDGFC-206ENST00000510982 BEND3Q5T5X7 828 aa11.02□□□□□ -0.65
PDGFC-206ENST00000510982 CASP8AP2Q9UKL3 1982 aa11.01□□□□□ -0.65
PDGFC-206ENST00000510982 TAF5LO75529 589 aa11.01□□□□□ -0.65
PDGFC-206ENST00000510982 KLRK1P26718 216 aa11.01□□□□□ -0.65
PDGFC-206ENST00000510982 GTF2IP78347 998 aa11.01□□□□□ -0.65
PDGFC-206ENST00000510982 FOXO4P98177 505 aa11.01□□□□□ -0.65
PDGFC-206ENST00000510982 PRAMEF18Q5VWM3 479 aa11.01□□□□□ -0.65
PDGFC-206ENST00000510982 HELBQ8NG08 1087 aaPredicted RBP11.01□□□□□ -0.65
PDGFC-206ENST00000510982 MYO3BQ8WXR4 1341 aa11.01□□□□□ -0.65
PDGFC-206ENST00000510982 PITPNM2Q9BZ72 1349 aa11.01□□□□□ -0.65
PDGFC-206ENST00000510982 MYH3P11055 1940 aa11.01□□□□□ -0.65
PDGFC-206ENST00000510982 ZNF609O15014 1411 aa11.01□□□□□ -0.65
PDGFC-206ENST00000510982 CACNA1FO60840 1977 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 SNAP23O00161 211 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 WNT10BO00744 389 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 TRPA1O75762 1119 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 MMP14P50281 582 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 FKBP1BP68106 108 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 TTLL12Q14166 644 aaPredicted RBP11□□□□□ -0.65
PDGFC-206ENST00000510982 LMBR1LQ6UX01 489 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 KIAA0825Q8IV33 1275 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 CSRNP1Q96S65 589 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 CD209Q9NNX6 404 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 RNF186Q9NXI6 227 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 C9orf78Q9NZ63 289 aaPredicted RBP11□□□□□ -0.65
PDGFC-206ENST00000510982 HDAC9Q9UKV0 1011 aa11□□□□□ -0.65
PDGFC-206ENST00000510982 THSD7BQ9C0I4 1608 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 UBE2Q2LH0YL09 131 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 PLIN1O60240 522 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 SLC10A3P09131 477 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 NF2P35240 595 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 DGKZQ13574 1117 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 CCDC57Q2TAC2 916 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 TAF7LQ5H9L4 462 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 SLC4A10Q6U841 1118 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 MOB2Q70IA6 237 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 MCOLN1Q9GZU1 580 aa10.99□□□□□ -0.65
PDGFC-206ENST00000510982 GRM8O00222 908 aa10.98□□□□□ -0.65
PDGFC-206ENST00000510982 SASH1O94885 1247 aa10.98□□□□□ -0.65
PDGFC-206ENST00000510982 EPHA10Q5JZY3 1008 aa10.98□□□□□ -0.65
PDGFC-206ENST00000510982 LDHAL6AQ6ZMR3 332 aa10.98□□□□□ -0.65
PDGFC-206ENST00000510982 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
PDGFC-206ENST00000510982 ZNF594Q96JF6 807 aaPredicted RBP10.98□□□□□ -0.65
PDGFC-206ENST00000510982 CNNM1Q9NRU3 951 aa10.98□□□□□ -0.65
PDGFC-206ENST00000510982 SAGE1Q9NXZ1 904 aa10.98□□□□□ -0.65
PDGFC-206ENST00000510982 SPEF2Q9C093 1822 aa10.98□□□□□ -0.65
PDGFC-206ENST00000510982 ALDH1L1O75891 902 aa10.97□□□□□ -0.65
PDGFC-206ENST00000510982 DLGAP5Q15398 846 aa10.97□□□□□ -0.65
PDGFC-206ENST00000510982 C15orf52Q6ZUT6 534 aaKnown RBP10.97□□□□□ -0.65
PDGFC-206ENST00000510982 ZNF804AQ7Z570 1209 aa10.97□□□□□ -0.65
PDGFC-206ENST00000510982 RASAL3Q86YV0 1011 aa10.97□□□□□ -0.65
PDGFC-206ENST00000510982 SRCIN1Q9C0H9 1055 aa10.97□□□□□ -0.65
PDGFC-206ENST00000510982 PSME4Q14997 1843 aa10.97□□□□□ -0.65
PDGFC-206ENST00000510982 F8W031 263 aaPredicted RBP10.96□□□□□ -0.65
PDGFC-206ENST00000510982 PRKG1Q13976 671 aa10.96□□□□□ -0.65
PDGFC-206ENST00000510982 ARMC9Q7Z3E5 817 aa10.96□□□□□ -0.65
PDGFC-206ENST00000510982 APOBEC3FQ8IUX4 373 aaKnown RBP10.96□□□□□ -0.65
PDGFC-206ENST00000510982 IRS2Q9Y4H2 1338 aa10.95□□□□□ -0.66
PDGFC-206ENST00000510982 IL1R1P14778 569 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms