RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 CACNA2D4Q7Z3S7 1137 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 TTC6Q86TZ1 520 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 ZNF496Q96IT1 587 aaPredicted RBP8.24□□□□□ -1.09
KDM3B-207ENST00000510866 BCS1LQ9Y276 419 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 USP19O94966 1318 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 MBD5Q9P267 1494 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 STX6O43752 255 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 CALM1P0DP23 149 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 CALM2P0DP24 149 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 CALM3P0DP25 149 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 HSP90B2PQ58FF3 399 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 TFIP11Q9UBB9 837 aaKnown RBP8.24□□□□□ -1.09
KDM3B-207ENST00000510866 PTPRTO14522 1441 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 ERCC6L2Q5T890 1561 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 MAST3O60307 1309 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 KIAA0232Q92628 1395 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 SYCE3A1L190 88 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 EPB41L2O43491 1005 aaKnown RBP8.24□□□□□ -1.09
KDM3B-207ENST00000510866 TBCAO75347 108 aaKnown RBP8.24□□□□□ -1.09
KDM3B-207ENST00000510866 TRIM37O94972 964 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 ERCC4Q92889 916 aaPredicted RBP8.24□□□□□ -1.09
KDM3B-207ENST00000510866 DRC1Q96MC2 740 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 CWC15Q9P013 229 aaKnown RBP8.24□□□□□ -1.09
KDM3B-207ENST00000510866 NBPF7P0C2Y1 421 aaPredicted RBP8.24□□□□□ -1.09
KDM3B-207ENST00000510866 MCM4P33991 863 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 TMOD4Q9NZQ9 345 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 BIN2Q9UBW5 565 aaPredicted RBP8.24□□□□□ -1.09
KDM3B-207ENST00000510866 KIF1BO60333 1816 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 SHROOM2Q13796 1616 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 XAGE2Q96GT9 111 aa8.24□□□□□ -1.09
KDM3B-207ENST00000510866 CHST3Q7LGC8 479 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 FILIP1Q7Z7B0 1213 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 SPDYE3A6NKU9 549 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 SSFA2P28290 1259 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 TIMM10P62072 90 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 EAPPQ56P03 285 aaPredicted RBP8.23□□□□□ -1.09
KDM3B-207ENST00000510866 CCDC183Q5T5S1 534 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 DHX37Q8IY37 1157 aaKnown RBP8.23□□□□□ -1.09
KDM3B-207ENST00000510866 SH2D4AQ9H788 454 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 C6orf50Q9HD87 102 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 PPIP5K2O43314 1243 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 EIF4A1P60842 406 aaKnown RBP8.23□□□□□ -1.09
KDM3B-207ENST00000510866 TNNI3KQ59H18 835 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 KLHDC4Q8TBB5 520 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 PYM1Q9BRP8 204 aaKnown RBP8.23□□□□□ -1.09
KDM3B-207ENST00000510866 LRRC27Q9C0I9 530 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 FPGT-TNNI3KV9GXZ4 949 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 CHL1O00533 1208 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 PER1O15534 1290 aaPredicted RBP8.23□□□□□ -1.09
KDM3B-207ENST00000510866 RBM25P49756 843 aaKnown RBP8.23□□□□□ -1.09
KDM3B-207ENST00000510866 PRKG1Q13976 671 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 ENOX2Q16206 610 aaKnown RBP8.23□□□□□ -1.09
KDM3B-207ENST00000510866 CCDC171Q6TFL3 1326 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 CCDC40Q4G0X9 1142 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 JAKMIP3Q5VZ66 844 aa8.23□□□□□ -1.09
KDM3B-207ENST00000510866 TCERG1LQ5VWI1 586 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 C2CD5Q86YS7 1000 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 TAF4BQ92750 862 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 SUCLG2Q96I99 432 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 DCTPP1Q9H773 170 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 ARMT1Q9H993 441 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 FAM135BQ49AJ0 1406 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 RLBP1P12271 317 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 WDR66Q8TBY9 1149 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 CTAGE5O15320 804 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 MTIF2P46199 727 aaKnown RBP8.22□□□□□ -1.09
KDM3B-207ENST00000510866 CETN1Q12798 172 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 TRIM35Q9UPQ4 493 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 MROH5Q6ZUA9 1318 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 PARP1P09874 1014 aaKnown RBP8.22□□□□□ -1.09
KDM3B-207ENST00000510866 SPA17Q15506 151 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 FAM196AQ6ZSG2 479 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 KRT27Q7Z3Y8 459 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 FERMT2Q96AC1 680 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 ZKSCAN3Q9BRR0 538 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 HELLSQ9NRZ9 838 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 ROBO2Q9HCK4 1378 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 NPC1L1Q9UHC9 1359 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 ARHGAP27Q6ZUM4 889 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 EXOC1Q9NV70 894 aa8.22□□□□□ -1.09
KDM3B-207ENST00000510866 TBC1D2Q9BYX2 928 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 GRPEL1Q9HAV7 217 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 ARHGEF10LQ9HCE6 1279 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 AATFQ9NY61 560 aaKnown RBP eCLIP8.21□□□□□ -1.09
KDM3B-207ENST00000510866 BIN1O00499 593 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 GCKRQ14397 625 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 FAM182BQ5T319 152 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 VPS36Q86VN1 386 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 LPIN2Q92539 896 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 CARD10Q9BWT7 1032 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 MMRN2Q9H8L6 949 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 GDPD2Q9HCC8 539 aa8.21□□□□□ -1.09
KDM3B-207ENST00000510866 NEFHP12036 1026 aa8.21□□□□□ -1.1
KDM3B-207ENST00000510866 KCNQ3O43525 872 aa8.21□□□□□ -1.1
KDM3B-207ENST00000510866 CETN2P41208 172 aa8.21□□□□□ -1.1
KDM3B-207ENST00000510866 STAT6P42226 847 aa8.21□□□□□ -1.1
KDM3B-207ENST00000510866 CREB3L3Q68CJ9 461 aa8.21□□□□□ -1.1
KDM3B-207ENST00000510866 KANK3Q6NY19 840 aa8.21□□□□□ -1.1
KDM3B-207ENST00000510866 ZSCAN16Q9H4T2 348 aaPredicted RBP8.21□□□□□ -1.1
KDM3B-207ENST00000510866 GPCPD1Q9NPB8 672 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms