RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-222ENST00000510545 LIMCH1Q9UPQ0 1083 aa19.36■□□□□ 0.69
CLDND1-222ENST00000510545 HMG20BQ9P0W2 317 aa19.35■□□□□ 0.69
CLDND1-222ENST00000510545 ZPR1O75312 459 aa19.34■□□□□ 0.69
CLDND1-222ENST00000510545 IGHMBP2P38935 993 aaKnown RBP19.34■□□□□ 0.69
CLDND1-222ENST00000510545 U3KPZ7 1027 aaPredicted RBP19.34■□□□□ 0.69
CLDND1-222ENST00000510545 C4BP0C0L5 1744 aa19.34■□□□□ 0.69
CLDND1-222ENST00000510545 CYP21A2P08686 494 aa19.34■□□□□ 0.69
CLDND1-222ENST00000510545 SF3B3Q15393 1217 aaKnown RBP19.34■□□□□ 0.69
CLDND1-222ENST00000510545 TCEANC2Q96MN5 208 aa19.34■□□□□ 0.69
CLDND1-222ENST00000510545 ARID4AP29374 1257 aaPredicted RBP19.33■□□□□ 0.69
CLDND1-222ENST00000510545 GSE1Q14687 1217 aa19.33■□□□□ 0.69
CLDND1-222ENST00000510545 SLC10A5Q5PT55 438 aa19.33■□□□□ 0.69
CLDND1-222ENST00000510545 CLEC17AQ6ZS10 378 aa19.33■□□□□ 0.69
CLDND1-222ENST00000510545 GBP4Q96PP9 640 aa19.33■□□□□ 0.69
CLDND1-222ENST00000510545 SETDB2Q96T68 719 aa19.33■□□□□ 0.69
CLDND1-222ENST00000510545 TAF1P21675 1872 aa19.33■□□□□ 0.68
CLDND1-222ENST00000510545 ARAP2Q8WZ64 1704 aa19.33■□□□□ 0.68
CLDND1-222ENST00000510545 A0A0G2JLW4 131 aa19.33■□□□□ 0.68
CLDND1-222ENST00000510545 PHF14O94880 888 aa19.33■□□□□ 0.68
CLDND1-222ENST00000510545 HSPD1P10809 573 aaKnown RBP19.33■□□□□ 0.68
CLDND1-222ENST00000510545 PSMA5P28066 241 aa19.33■□□□□ 0.68
CLDND1-222ENST00000510545 CHRNDQ07001 517 aa19.33■□□□□ 0.68
CLDND1-222ENST00000510545 FAM196AQ6ZSG2 479 aa19.33■□□□□ 0.68
CLDND1-222ENST00000510545 DDX11L8A8MPP1 907 aa19.32■□□□□ 0.68
CLDND1-222ENST00000510545 BAG4O95429 457 aaKnown RBP19.32■□□□□ 0.68
CLDND1-222ENST00000510545 SLC5A1P13866 664 aa19.32■□□□□ 0.68
CLDND1-222ENST00000510545 CCDC24Q8N4L8 307 aa19.32■□□□□ 0.68
CLDND1-222ENST00000510545 DSCC1Q9BVC3 393 aa19.32■□□□□ 0.68
CLDND1-222ENST00000510545 PIH1D3Q9NQM4 214 aaKnown RBP19.32■□□□□ 0.68
CLDND1-222ENST00000510545 CASZ1Q86V15 1759 aa19.32■□□□□ 0.68
CLDND1-222ENST00000510545 RPS6KB1P23443 525 aa19.31■□□□□ 0.68
CLDND1-222ENST00000510545 GTF2E1P29083 439 aaPredicted RBP19.31■□□□□ 0.68
CLDND1-222ENST00000510545 BLOC1S2Q6QNY1 142 aa19.31■□□□□ 0.68
CLDND1-222ENST00000510545 PUS7LQ9H0K6 701 aaKnown RBP19.31■□□□□ 0.68
CLDND1-222ENST00000510545 COL24A1Q17RW2 1714 aa19.31■□□□□ 0.68
CLDND1-222ENST00000510545 FOXP2O15409 715 aa19.31■□□□□ 0.68
CLDND1-222ENST00000510545 ZFYP08048 801 aaPredicted RBP19.31■□□□□ 0.68
CLDND1-222ENST00000510545 ST3GAL1Q11201 340 aa19.31■□□□□ 0.68
CLDND1-222ENST00000510545 WASHC4Q2M389 1173 aa19.31■□□□□ 0.68
CLDND1-222ENST00000510545 STOX1Q6ZVD7 989 aa19.31■□□□□ 0.68
CLDND1-222ENST00000510545 CDC5LQ99459 802 aaKnown RBP19.31■□□□□ 0.68
CLDND1-222ENST00000510545 BRWD3Q6RI45 1802 aa19.31■□□□□ 0.68
CLDND1-222ENST00000510545 C4AP0C0L4 1744 aa19.3■□□□□ 0.68
CLDND1-222ENST00000510545 WTIPA6NIX2 430 aaPredicted RBP19.3■□□□□ 0.68
CLDND1-222ENST00000510545 NBPF5PQ86XG9 351 aaPredicted RBP19.3■□□□□ 0.68
CLDND1-222ENST00000510545 MYO5AQ9Y4I1 1855 aaKnown RBP19.3■□□□□ 0.68
CLDND1-222ENST00000510545 TRAK2O60296 914 aa19.3■□□□□ 0.68
CLDND1-222ENST00000510545 UQCRFS1P1P0C7P4 283 aa19.3■□□□□ 0.68
CLDND1-222ENST00000510545 ME3Q16798 604 aa19.3■□□□□ 0.68
CLDND1-222ENST00000510545 TRAPPC3LQ5T215 181 aa19.3■□□□□ 0.68
CLDND1-222ENST00000510545 KRT27Q7Z3Y8 459 aa19.3■□□□□ 0.68
CLDND1-222ENST00000510545 APPBP2Q92624 585 aa19.3■□□□□ 0.68
CLDND1-222ENST00000510545 CELF1Q92879 486 aaKnown RBP19.3■□□□□ 0.68
CLDND1-222ENST00000510545 NYXQ9GZU5 481 aa19.3■□□□□ 0.68
CLDND1-222ENST00000510545 TPCN1Q9ULQ1 816 aa19.3■□□□□ 0.68
CLDND1-222ENST00000510545 DTNBO60941 627 aa19.29■□□□□ 0.68
CLDND1-222ENST00000510545 RASGRF1Q13972 1273 aa19.29■□□□□ 0.68
CLDND1-222ENST00000510545 LRRFIP1Q32MZ4 808 aaKnown RBP19.29■□□□□ 0.68
CLDND1-222ENST00000510545 FOXD4L5Q5VV16 416 aaPredicted RBP19.29■□□□□ 0.68
CLDND1-222ENST00000510545 FOXD4L4Q8WXT5 416 aaPredicted RBP19.29■□□□□ 0.68
CLDND1-222ENST00000510545 CHAMP1Q96JM3 812 aa19.29■□□□□ 0.68
CLDND1-222ENST00000510545 MYH7P12883 1935 aa19.29■□□□□ 0.68
CLDND1-222ENST00000510545 RFC4P35249 363 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 ADD2P35612 726 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 BCAMP50895 628 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 TOB2Q14106 344 aaPredicted RBP19.28■□□□□ 0.68
CLDND1-222ENST00000510545 KRT32Q14532 448 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 ANKRD18AQ8IVF6 992 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 NEK1Q96PY6 1258 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 TRIM37O94972 964 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 BRD1O95696 1058 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 TTLL5Q6EMB2 1281 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 CCDC83Q8IWF9 413 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 SPATA5Q8NB90 893 aa19.28■□□□□ 0.68
CLDND1-222ENST00000510545 SLC9C2Q5TAH2 1124 aa19.27■□□□□ 0.68
CLDND1-222ENST00000510545 NECAB1Q8N987 351 aa19.27■□□□□ 0.68
CLDND1-222ENST00000510545 ALDH8A1Q9H2A2 487 aaPredicted RBP19.27■□□□□ 0.68
CLDND1-222ENST00000510545 BSDC1Q9NW68 430 aaPredicted RBP19.27■□□□□ 0.68
CLDND1-222ENST00000510545 IDH1O75874 414 aaKnown RBP19.27■□□□□ 0.67
CLDND1-222ENST00000510545 TTF1Q15361 905 aaPredicted RBP19.27■□□□□ 0.67
CLDND1-222ENST00000510545 TPTE2Q6XPS3 522 aa19.27■□□□□ 0.67
CLDND1-222ENST00000510545 ZSCAN31Q96LW9 406 aaPredicted RBP19.27■□□□□ 0.67
CLDND1-222ENST00000510545 WWC3Q9ULE0 1092 aa19.27■□□□□ 0.67
CLDND1-222ENST00000510545 NLRP3Q96P20 1036 aa19.26■□□□□ 0.67
CLDND1-222ENST00000510545 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.26■□□□□ 0.67
CLDND1-222ENST00000510545 SH2B1Q9NRF2 756 aaPredicted RBP19.26■□□□□ 0.67
CLDND1-222ENST00000510545 MINPP1Q9UNW1 487 aa19.26■□□□□ 0.67
CLDND1-222ENST00000510545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.25■□□□□ 0.67
CLDND1-222ENST00000510545 GPAA1O43292 621 aa19.25■□□□□ 0.67
CLDND1-222ENST00000510545 NFIXQ14938 502 aa19.25■□□□□ 0.67
CLDND1-222ENST00000510545 PDE6AP16499 860 aa19.25■□□□□ 0.67
CLDND1-222ENST00000510545 A0A1B0GUL6 1792 aa19.25■□□□□ 0.67
CLDND1-222ENST00000510545 ZNF532Q9HCE3 1301 aa19.24■□□□□ 0.67
CLDND1-222ENST00000510545 TCRBV5S4A2TA0A5A2 114 aa19.24■□□□□ 0.67
CLDND1-222ENST00000510545 MCTP1Q6DN14 999 aa19.24■□□□□ 0.67
CLDND1-222ENST00000510545 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.24■□□□□ 0.67
CLDND1-222ENST00000510545 FGAP02671 866 aa19.24■□□□□ 0.67
CLDND1-222ENST00000510545 TM4SF1P30408 202 aa19.24■□□□□ 0.67
CLDND1-222ENST00000510545 UBE3CQ15386 1083 aa19.24■□□□□ 0.67
CLDND1-222ENST00000510545 ZSCAN25Q6NSZ9 544 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms