RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 RSBN1LQ6PCB5 846 aaPredicted RBP23.39■■□□□ 1.33
LSM6-206ENST00000510331 PODNQ7Z5L7 613 aa23.39■■□□□ 1.33
LSM6-206ENST00000510331 GLIS2Q9BZE0 524 aaPredicted RBP23.39■■□□□ 1.33
LSM6-206ENST00000510331 USP44Q9H0E7 712 aa23.39■■□□□ 1.33
LSM6-206ENST00000510331 CNTNAP1P78357 1384 aa23.39■■□□□ 1.33
LSM6-206ENST00000510331 COA1Q9GZY4 146 aa23.38■■□□□ 1.33
LSM6-206ENST00000510331 USP17L3A6NCW0 530 aa23.37■■□□□ 1.33
LSM6-206ENST00000510331 USP17L4A6NCW7 530 aa23.37■■□□□ 1.33
LSM6-206ENST00000510331 BRPF1P55201 1214 aaPredicted RBP23.37■■□□□ 1.33
LSM6-206ENST00000510331 KIF4BQ2VIQ3 1234 aa23.37■■□□□ 1.33
LSM6-206ENST00000510331 LDHAL6AQ6ZMR3 332 aa23.37■■□□□ 1.33
LSM6-206ENST00000510331 USP17L1Q7RTZ2 530 aa23.37■■□□□ 1.33
LSM6-206ENST00000510331 FBXW7Q969H0 707 aa23.37■■□□□ 1.33
LSM6-206ENST00000510331 MXD3Q9BW11 206 aa23.37■■□□□ 1.33
LSM6-206ENST00000510331 CNNM1Q9NRU3 951 aa23.37■■□□□ 1.33
LSM6-206ENST00000510331 POLR2AP24928 1970 aaKnown RBP23.37■■□□□ 1.33
LSM6-206ENST00000510331 KIF16BQ96L93 1317 aa23.36■■□□□ 1.33
LSM6-206ENST00000510331 RBM26Q5T8P6 1007 aaKnown RBP23.36■■□□□ 1.33
LSM6-206ENST00000510331 AGBL3Q8NEM8 1001 aa23.36■■□□□ 1.33
LSM6-206ENST00000510331 PUS3Q9BZE2 481 aaKnown RBP23.36■■□□□ 1.33
LSM6-206ENST00000510331 PGAP2Q9UHJ9 254 aa23.36■■□□□ 1.33
LSM6-206ENST00000510331 DACT2Q5SW24 774 aa23.35■■□□□ 1.33
LSM6-206ENST00000510331 ZC3H15Q8WU90 426 aaKnown RBP23.35■■□□□ 1.33
LSM6-206ENST00000510331 GMLQ99445 158 aa23.35■■□□□ 1.33
LSM6-206ENST00000510331 API5Q9BZZ5 524 aaKnown RBP23.35■■□□□ 1.33
LSM6-206ENST00000510331 ASTN2O75129 1339 aaPredicted RBP23.34■■□□□ 1.33
LSM6-206ENST00000510331 THSD7BQ9C0I4 1608 aa23.34■■□□□ 1.33
LSM6-206ENST00000510331 ARAP2Q8WZ64 1704 aa23.34■■□□□ 1.33
LSM6-206ENST00000510331 PLIN1O60240 522 aa23.34■■□□□ 1.33
LSM6-206ENST00000510331 ZNF280AP59817 542 aaPredicted RBP23.33■■□□□ 1.33
LSM6-206ENST00000510331 ABT1Q9ULW3 272 aaKnown RBP23.33■■□□□ 1.33
LSM6-206ENST00000510331 CST9Q5W186 159 aa23.32■■□□□ 1.32
LSM6-206ENST00000510331 DLK2Q6UY11 383 aa23.32■■□□□ 1.32
LSM6-206ENST00000510331 C15orf52Q6ZUT6 534 aaKnown RBP23.32■■□□□ 1.32
LSM6-206ENST00000510331 KLHDC4Q8TBB5 520 aa23.32■■□□□ 1.32
LSM6-206ENST00000510331 GGA3Q9NZ52 723 aa23.32■■□□□ 1.32
LSM6-206ENST00000510331 USP17L8P0C7I0 530 aa23.31■■□□□ 1.32
LSM6-206ENST00000510331 STRIP1Q5VSL9 837 aa23.31■■□□□ 1.32
LSM6-206ENST00000510331 CD209Q9NNX6 404 aa23.31■■□□□ 1.32
LSM6-206ENST00000510331 RASSF10A6NK89 507 aa23.3■■□□□ 1.32
LSM6-206ENST00000510331 ADM5C9JUS6 153 aa23.3■■□□□ 1.32
LSM6-206ENST00000510331 BCAR3O75815 825 aa23.3■■□□□ 1.32
LSM6-206ENST00000510331 CELF2O95319 508 aaKnown RBP23.3■■□□□ 1.32
LSM6-206ENST00000510331 UBTFL1P0CB47 393 aaPredicted RBP23.3■■□□□ 1.32
LSM6-206ENST00000510331 LRRC24Q50LG9 513 aa23.3■■□□□ 1.32
LSM6-206ENST00000510331 CDC37L1Q7L3B6 337 aa23.3■■□□□ 1.32
LSM6-206ENST00000510331 ZNF408Q9H9D4 720 aa23.3■■□□□ 1.32
LSM6-206ENST00000510331 MYOZ2Q9NPC6 264 aa23.3■■□□□ 1.32
LSM6-206ENST00000510331 TNNQ9UQP3 1299 aa23.3■■□□□ 1.32
LSM6-206ENST00000510331 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
LSM6-206ENST00000510331 MYO3BQ8WXR4 1341 aa23.3■■□□□ 1.32
LSM6-206ENST00000510331 VEGFBP49765 207 aa23.29■■□□□ 1.32
LSM6-206ENST00000510331 GTF2IP78347 998 aa23.29■■□□□ 1.32
LSM6-206ENST00000510331 KRT26Q7Z3Y9 468 aa23.29■■□□□ 1.32
LSM6-206ENST00000510331 ZNF804AQ7Z570 1209 aa23.29■■□□□ 1.32
LSM6-206ENST00000510331 USP48Q86UV5 1035 aa23.29■■□□□ 1.32
LSM6-206ENST00000510331 RIPOR2Q9Y4F9 1068 aa23.29■■□□□ 1.32
LSM6-206ENST00000510331 MROH5Q6ZUA9 1318 aa23.29■■□□□ 1.32
LSM6-206ENST00000510331 TTLL5Q6EMB2 1281 aa23.28■■□□□ 1.32
LSM6-206ENST00000510331 MEIS3Q99687 375 aa23.28■■□□□ 1.32
LSM6-206ENST00000510331 TRIM27P14373 513 aa23.27■■□□□ 1.32
LSM6-206ENST00000510331 RFX5P48382 616 aaPredicted RBP23.27■■□□□ 1.32
LSM6-206ENST00000510331 ARHGAP45Q92619 1136 aa23.27■■□□□ 1.32
LSM6-206ENST00000510331 FRAT1Q92837 279 aaPredicted RBP23.27■■□□□ 1.32
LSM6-206ENST00000510331 DCPSQ96C86 337 aaKnown RBP23.27■■□□□ 1.32
LSM6-206ENST00000510331 JAG2Q9Y219 1238 aa23.27■■□□□ 1.32
LSM6-206ENST00000510331 ECM29Q5VYK3 1845 aa23.26■■□□□ 1.31
LSM6-206ENST00000510331 HSPA1AP0DMV8 641 aaKnown RBP23.26■■□□□ 1.31
LSM6-206ENST00000510331 HSPA1BP0DMV9 641 aaKnown RBP23.26■■□□□ 1.31
LSM6-206ENST00000510331 IL1R1P14778 569 aa23.26■■□□□ 1.31
LSM6-206ENST00000510331 SCARF1Q14162 830 aa23.26■■□□□ 1.31
LSM6-206ENST00000510331 METTL24Q5JXM2 366 aa23.26■■□□□ 1.31
LSM6-206ENST00000510331 ANGEL2Q5VTE6 544 aaKnown RBP23.26■■□□□ 1.31
LSM6-206ENST00000510331 KIAA0825Q8IV33 1275 aa23.26■■□□□ 1.31
LSM6-206ENST00000510331 CERS5Q8N5B7 392 aa23.26■■□□□ 1.31
LSM6-206ENST00000510331 VGLL2Q8N8G2 317 aa23.26■■□□□ 1.31
LSM6-206ENST00000510331 LRRFIP2Q9Y608 721 aaKnown RBP23.26■■□□□ 1.31
LSM6-206ENST00000510331 TLL2Q9Y6L7 1015 aa23.26■■□□□ 1.31
LSM6-206ENST00000510331 GYG1P46976 350 aa23.25■■□□□ 1.31
LSM6-206ENST00000510331 UBE4AQ14139 1066 aa23.25■■□□□ 1.31
LSM6-206ENST00000510331 DEFB115Q30KQ5 88 aa23.25■■□□□ 1.31
LSM6-206ENST00000510331 INTS3Q68E01 1043 aaKnown RBP23.25■■□□□ 1.31
LSM6-206ENST00000510331 MYH13Q9UKX3 1938 aa23.25■■□□□ 1.31
LSM6-206ENST00000510331 SASH1O94885 1247 aa23.24■■□□□ 1.31
LSM6-206ENST00000510331 ATF7IPQ6VMQ6 1270 aa23.24■■□□□ 1.31
LSM6-206ENST00000510331 PAXIP1Q6ZW49 1069 aaPredicted RBP23.24■■□□□ 1.31
LSM6-206ENST00000510331 NBPF9Q3BBW0 867 aa23.23■■□□□ 1.31
LSM6-206ENST00000510331 SULF1Q8IWU6 871 aa23.23■■□□□ 1.31
LSM6-206ENST00000510331 OGFOD1Q8N543 542 aa23.23■■□□□ 1.31
LSM6-206ENST00000510331 CLUAP1Q96AJ1 413 aa23.23■■□□□ 1.31
LSM6-206ENST00000510331 SCAF8Q9UPN6 1271 aaKnown RBP23.23■■□□□ 1.31
LSM6-206ENST00000510331 PTPN12Q05209 780 aaKnown RBP23.22■■□□□ 1.31
LSM6-206ENST00000510331 CYP4F22Q6NT55 531 aa23.22■■□□□ 1.31
LSM6-206ENST00000510331 SAPCD2Q86UD0 394 aa23.22■■□□□ 1.31
LSM6-206ENST00000510331 WDR33Q9C0J8 1336 aaKnown RBP23.22■■□□□ 1.31
LSM6-206ENST00000510331 IPO8O15397 1037 aaKnown RBP23.21■■□□□ 1.31
LSM6-206ENST00000510331 GRM1Q13255 1194 aa23.21■■□□□ 1.31
LSM6-206ENST00000510331 FAM84BQ96KN1 310 aaPredicted RBP23.21■■□□□ 1.31
LSM6-206ENST00000510331 CAPNS2Q96L46 248 aa23.21■■□□□ 1.31
LSM6-206ENST00000510331 PITPNM2Q9BZ72 1349 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms