RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 TAGLNQ01995 201 aaKnown RBP8.97□□□□□ -0.97
CAST-228ENST00000509903 CCDC173Q0VFZ6 552 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 ILDR2Q71H61 639 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 KLHDC4Q8TBB5 520 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 JAKMIP1Q96N16 626 aaKnown RBP8.97□□□□□ -0.97
CAST-228ENST00000509903 FSD1Q9BTV5 496 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 FAM198AQ9UFP1 575 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 CCDC171Q6TFL3 1326 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 MRC1P22897 1456 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 GUCA2AQ02747 115 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 PTH1RQ03431 593 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 SPATA31A3Q5VYP0 1347 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 BOLA2Q9H3K6 86 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 TLR7Q9NYK1 1049 aaKnown RBP8.97□□□□□ -0.97
CAST-228ENST00000509903 RBM27Q9P2N5 1060 aaKnown RBP8.97□□□□□ -0.97
CAST-228ENST00000509903 CYP46A1Q9Y6A2 500 aa8.97□□□□□ -0.97
CAST-228ENST00000509903 NMIQ13287 307 aaPredicted RBP8.96□□□□□ -0.97
CAST-228ENST00000509903 DIXDC1Q155Q3 683 aa8.96□□□□□ -0.97
CAST-228ENST00000509903 FOXD4L6Q3SYB3 417 aaPredicted RBP8.96□□□□□ -0.97
CAST-228ENST00000509903 FOXD4L3Q6VB84 417 aaPredicted RBP8.96□□□□□ -0.97
CAST-228ENST00000509903 RUFY3Q7L099 469 aa8.96□□□□□ -0.97
CAST-228ENST00000509903 UBE3BQ7Z3V4 1068 aa8.96□□□□□ -0.97
CAST-228ENST00000509903 PRM3Q9NNZ6 103 aa8.96□□□□□ -0.97
CAST-228ENST00000509903 PDRG1Q9NUG6 133 aa8.96□□□□□ -0.97
CAST-228ENST00000509903 SMC3Q9UQE7 1217 aa8.96□□□□□ -0.97
CAST-228ENST00000509903 STRCP1A6NGW2 1772 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 CPDO75976 1380 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 ESPNB1AK53 854 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 CPA1P15085 419 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 EPHA10Q5JZY3 1008 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 VPS53Q5VIR6 699 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 TTC13Q8NBP0 860 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 SYAP1Q96A49 352 aaPredicted RBP8.96□□□□□ -0.98
CAST-228ENST00000509903 FAM227BQ96M60 508 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 TM6SF1Q9BZW5 370 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 TMEM63CQ9P1W3 806 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 RBM8AQ9Y5S9 174 aaKnown RBP8.96□□□□□ -0.98
CAST-228ENST00000509903 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.96□□□□□ -0.98
CAST-228ENST00000509903 PKD1L3Q7Z443 1732 aa8.96□□□□□ -0.98
CAST-228ENST00000509903 A0A087WZG4 1122 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 ATP5J2-PTCD1G3V325 749 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 GALR2O43603 387 aaPredicted RBP8.95□□□□□ -0.98
CAST-228ENST00000509903 PTCD1O75127 700 aaKnown RBP8.95□□□□□ -0.98
CAST-228ENST00000509903 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 LRP10Q7Z4F1 713 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 JARID2Q92833 1246 aaPredicted RBP8.95□□□□□ -0.98
CAST-228ENST00000509903 COPRSQ9NQ92 184 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 PRDM11Q9NQV5 511 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 AFDNP55196 1824 aaKnown RBP8.95□□□□□ -0.98
CAST-228ENST00000509903 RPAP1Q9BWH6 1393 aaPredicted RBP8.95□□□□□ -0.98
CAST-228ENST00000509903 SYCE3A1L190 88 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 STX6O43752 255 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 PSMA5P28066 241 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 SERPINB4P48594 390 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 NECTIN1Q15223 517 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 TUSC1Q2TAM9 212 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 ADCK5Q3MIX3 580 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 CREB3L3Q68CJ9 461 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 LRSAM1Q6UWE0 723 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 TOM1L2Q6ZVM7 507 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 PLBD2Q8NHP8 589 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 ZSCAN31Q96LW9 406 aaPredicted RBP8.95□□□□□ -0.98
CAST-228ENST00000509903 EPAS1Q99814 870 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 ZSWIM6Q9HCJ5 1215 aa8.95□□□□□ -0.98
CAST-228ENST00000509903 SH2B1Q9NRF2 756 aaPredicted RBP8.95□□□□□ -0.98
CAST-228ENST00000509903 NSFL1CQ9UNZ2 370 aaKnown RBP8.95□□□□□ -0.98
CAST-228ENST00000509903 PCDH11XQ9BZA7 1347 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 PCDH11YQ9BZA8 1340 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 A0A0D9SFI3 127 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 RCCD1A6NED2 376 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 PIK3CDO00329 1044 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 ZSCAN22P10073 491 aaPredicted RBP8.94□□□□□ -0.98
CAST-228ENST00000509903 ATN1P54259 1190 aaPredicted RBP8.94□□□□□ -0.98
CAST-228ENST00000509903 CCDC83Q8IWF9 413 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 MAP4K1Q92918 833 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 KCNB2Q92953 911 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 PPP1R9BQ96SB3 815 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 RBSNQ9H1K0 784 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 PCDHGC3Q9UN70 934 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 ATP6V1DQ9Y5K8 247 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 ERBB4Q15303 1308 aa8.94□□□□□ -0.98
CAST-228ENST00000509903 SYT1P21579 422 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 PTPN12Q05209 780 aaKnown RBP8.93□□□□□ -0.98
CAST-228ENST00000509903 WASHC4Q2M389 1173 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 RABL6Q3YEC7 729 aaPredicted RBP8.93□□□□□ -0.98
CAST-228ENST00000509903 TNNI3KQ59H18 835 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 ZCRB1Q8TBF4 217 aaKnown RBP8.93□□□□□ -0.98
CAST-228ENST00000509903 CHMP3Q9Y3E7 222 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 FPGT-TNNI3KV9GXZ4 949 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 LAMB4A4D0S4 1761 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 ARFGEF2Q9Y6D5 1785 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 COL15A1P39059 1388 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 PARP4Q9UKK3 1724 aaKnown RBP8.93□□□□□ -0.98
CAST-228ENST00000509903 WDR17Q8IZU2 1322 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 SLC27A2O14975 620 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 LARGE1O95461 756 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 RFX5P48382 616 aaPredicted RBP8.93□□□□□ -0.98
CAST-228ENST00000509903 HSPA2P54652 639 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 TFCP2Q12800 502 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 C6orf132Q5T0Z8 1188 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms