RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RASAL3Q86YV0 1011 aa20.51■□□□□ 0.87
RAB40C-202ENST00000509637 G3V3G9 751 aa20.5■□□□□ 0.87
RAB40C-202ENST00000509637 SNAP23O00161 211 aa20.5■□□□□ 0.87
RAB40C-202ENST00000509637 DDX58O95786 925 aaKnown RBP20.5■□□□□ 0.87
RAB40C-202ENST00000509637 CCT4P50991 539 aaKnown RBP20.5■□□□□ 0.87
RAB40C-202ENST00000509637 DCAF8Q5TAQ9 597 aa20.5■□□□□ 0.87
RAB40C-202ENST00000509637 UBE3BQ7Z3V4 1068 aa20.5■□□□□ 0.87
RAB40C-202ENST00000509637 PODNQ7Z5L7 613 aa20.5■□□□□ 0.87
RAB40C-202ENST00000509637 CCDC102AQ96A19 550 aa20.5■□□□□ 0.87
RAB40C-202ENST00000509637 MYH3P11055 1940 aa20.5■□□□□ 0.87
RAB40C-202ENST00000509637 MED23Q9ULK4 1368 aa20.48■□□□□ 0.87
RAB40C-202ENST00000509637 UBE2Q2LH0YL09 131 aa20.48■□□□□ 0.87
RAB40C-202ENST00000509637 SLC4A2P04920 1241 aa20.48■□□□□ 0.87
RAB40C-202ENST00000509637 HSP90B1P14625 803 aaKnown RBP20.48■□□□□ 0.87
RAB40C-202ENST00000509637 TWISTNBQ3B726 338 aaPredicted RBP20.48■□□□□ 0.87
RAB40C-202ENST00000509637 CDC5LQ99459 802 aaKnown RBP20.48■□□□□ 0.87
RAB40C-202ENST00000509637 IRS2Q9Y4H2 1338 aa20.48■□□□□ 0.87
RAB40C-202ENST00000509637 CSF1RP07333 972 aa20.47■□□□□ 0.87
RAB40C-202ENST00000509637 GCKRQ14397 625 aa20.47■□□□□ 0.87
RAB40C-202ENST00000509637 CCDC27Q2M243 656 aa20.47■□□□□ 0.87
RAB40C-202ENST00000509637 PLA2G12BQ9BX93 195 aa20.47■□□□□ 0.87
RAB40C-202ENST00000509637 WNT10BO00744 389 aa20.46■□□□□ 0.87
RAB40C-202ENST00000509637 MLLT1Q03111 559 aaPredicted RBP20.46■□□□□ 0.87
RAB40C-202ENST00000509637 SAGE1Q9NXZ1 904 aa20.46■□□□□ 0.87
RAB40C-202ENST00000509637 AKAP11Q9UKA4 1901 aa20.46■□□□□ 0.87
RAB40C-202ENST00000509637 PITPNM2Q9BZ72 1349 aa20.46■□□□□ 0.87
RAB40C-202ENST00000509637 ZBED3Q96IU2 234 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-202ENST00000509637 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-202ENST00000509637 PCDHAC2Q9Y5I4 1007 aa20.45■□□□□ 0.86
RAB40C-202ENST00000509637 PAPPA2Q9BXP8 1791 aa20.44■□□□□ 0.86
RAB40C-202ENST00000509637 VAMP4O75379 141 aa20.44■□□□□ 0.86
RAB40C-202ENST00000509637 SASH1O94885 1247 aa20.44■□□□□ 0.86
RAB40C-202ENST00000509637 ITGA6P23229 1130 aa20.44■□□□□ 0.86
RAB40C-202ENST00000509637 FLIIQ13045 1269 aa20.44■□□□□ 0.86
RAB40C-202ENST00000509637 FZD1Q9UP38 647 aa20.44■□□□□ 0.86
RAB40C-202ENST00000509637 STRIP1Q5VSL9 837 aa20.43■□□□□ 0.86
RAB40C-202ENST00000509637 CERS5Q8N5B7 392 aa20.43■□□□□ 0.86
RAB40C-202ENST00000509637 STK31Q9BXU1 1019 aa20.43■□□□□ 0.86
RAB40C-202ENST00000509637 COA1Q9GZY4 146 aa20.43■□□□□ 0.86
RAB40C-202ENST00000509637 AOX1Q06278 1338 aa20.43■□□□□ 0.86
RAB40C-202ENST00000509637 FOXO4P98177 505 aa20.42■□□□□ 0.86
RAB40C-202ENST00000509637 NEXNQ0ZGT2 675 aa20.42■□□□□ 0.86
RAB40C-202ENST00000509637 EPHA10Q5JZY3 1008 aa20.42■□□□□ 0.86
RAB40C-202ENST00000509637 R3HDMLQ9H3Y0 253 aa20.42■□□□□ 0.86
RAB40C-202ENST00000509637 LEMD3Q9Y2U8 911 aa20.42■□□□□ 0.86
RAB40C-202ENST00000509637 ZNF804BA4D1E1 1349 aa20.42■□□□□ 0.86
RAB40C-202ENST00000509637 FANCIQ9NVI1 1328 aa20.42■□□□□ 0.86
RAB40C-202ENST00000509637 F6X3S4 739 aa20.41■□□□□ 0.86
RAB40C-202ENST00000509637 CHRNDQ07001 517 aa20.41■□□□□ 0.86
RAB40C-202ENST00000509637 HELBQ8NG08 1087 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-202ENST00000509637 DNAAF4Q8WXU2 420 aa20.41■□□□□ 0.86
RAB40C-202ENST00000509637 FBXW7Q969H0 707 aa20.41■□□□□ 0.86
RAB40C-202ENST00000509637 SALL2Q9Y467 1007 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-202ENST00000509637 TAF5LO75529 589 aa20.4■□□□□ 0.86
RAB40C-202ENST00000509637 FKBP1BP68106 108 aa20.4■□□□□ 0.86
RAB40C-202ENST00000509637 GTF2IP78347 998 aa20.4■□□□□ 0.86
RAB40C-202ENST00000509637 PTPN12Q05209 780 aaKnown RBP20.4■□□□□ 0.86
RAB40C-202ENST00000509637 IL16Q14005 1332 aa20.4■□□□□ 0.86
RAB40C-202ENST00000509637 TTLL5Q6EMB2 1281 aa20.4■□□□□ 0.86
RAB40C-202ENST00000509637 KIAA0825Q8IV33 1275 aa20.4■□□□□ 0.86
RAB40C-202ENST00000509637 SLC34A2O95436 690 aa20.39■□□□□ 0.85
RAB40C-202ENST00000509637 TBC1D8O95759 1140 aa20.39■□□□□ 0.85
RAB40C-202ENST00000509637 EXOSC9Q06265 439 aaKnown RBP20.39■□□□□ 0.85
RAB40C-202ENST00000509637 MKRN3Q13064 507 aaKnown RBP20.39■□□□□ 0.85
RAB40C-202ENST00000509637 LINS1Q8NG48 757 aa20.39■□□□□ 0.85
RAB40C-202ENST00000509637 CD209Q9NNX6 404 aa20.39■□□□□ 0.85
RAB40C-202ENST00000509637 IGHMBP2P38935 993 aaKnown RBP20.38■□□□□ 0.85
RAB40C-202ENST00000509637 SOX10P56693 466 aa20.38■□□□□ 0.85
RAB40C-202ENST00000509637 FKBP5Q13451 457 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-202ENST00000509637 A0A1B0GUL6 1792 aa20.38■□□□□ 0.85
RAB40C-202ENST00000509637 TNRC18O15417 2968 aaPredicted RBP20.37■□□□□ 0.85
RAB40C-202ENST00000509637 PRKG1Q13976 671 aa20.37■□□□□ 0.85
RAB40C-202ENST00000509637 BEND3Q5T5X7 828 aa20.37■□□□□ 0.85
RAB40C-202ENST00000509637 CHMP4AQ9BY43 222 aa20.37■□□□□ 0.85
RAB40C-202ENST00000509637 TM4SF4P48230 202 aa20.36■□□□□ 0.85
RAB40C-202ENST00000509637 LDLRAD1Q5T700 205 aa20.36■□□□□ 0.85
RAB40C-202ENST00000509637 ZNF594Q96JF6 807 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-202ENST00000509637 SSC5DA1L4H1 1573 aa20.35■□□□□ 0.85
RAB40C-202ENST00000509637 NCBP3Q53F19 620 aaKnown RBP20.35■□□□□ 0.85
RAB40C-202ENST00000509637 CTU1Q7Z7A3 348 aaKnown RBP20.35■□□□□ 0.85
RAB40C-202ENST00000509637 ZNF296Q8WUU4 475 aaPredicted RBP20.35■□□□□ 0.85
RAB40C-202ENST00000509637 MPHOSPH8Q99549 860 aa20.35■□□□□ 0.85
RAB40C-202ENST00000509637 ANKRD2Q9GZV1 360 aa20.35■□□□□ 0.85
RAB40C-202ENST00000509637 MYO3BQ8WXR4 1341 aa20.34■□□□□ 0.85
RAB40C-202ENST00000509637 C15orf52Q6ZUT6 534 aaKnown RBP20.34■□□□□ 0.85
RAB40C-202ENST00000509637 OGFOD1Q8N543 542 aa20.34■□□□□ 0.85
RAB40C-202ENST00000509637 JAG2Q9Y219 1238 aa20.34■□□□□ 0.85
RAB40C-202ENST00000509637 CACNA1FO60840 1977 aa20.34■□□□□ 0.85
RAB40C-202ENST00000509637 TTLL12Q14166 644 aaPredicted RBP20.33■□□□□ 0.85
RAB40C-202ENST00000509637 ANKRD18BA2A2Z9 1011 aa20.32■□□□□ 0.84
RAB40C-202ENST00000509637 LMBR1LQ6UX01 489 aa20.32■□□□□ 0.84
RAB40C-202ENST00000509637 WDR63Q8IWG1 891 aa20.32■□□□□ 0.84
RAB40C-202ENST00000509637 KAZALD1Q96I82 304 aa20.32■□□□□ 0.84
RAB40C-202ENST00000509637 CLMNQ96JQ2 1002 aa20.32■□□□□ 0.84
RAB40C-202ENST00000509637 PRMT6Q96LA8 375 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-202ENST00000509637 MYH16Q9H6N6 1097 aa20.32■□□□□ 0.84
RAB40C-202ENST00000509637 MRS2Q9HD23 443 aa20.32■□□□□ 0.84
RAB40C-202ENST00000509637 HPS5Q9UPZ3 1129 aa20.32■□□□□ 0.84
RAB40C-202ENST00000509637 IL1R1P14778 569 aa20.31■□□□□ 0.84
RAB40C-202ENST00000509637 SPRYD7Q5W111 196 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms