RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 SASH1O94885 1247 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 IGKV5-2P06315 115 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 HSP90B1P14625 803 aaKnown RBP13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 PODNQ7Z5L7 613 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 TXNRD3Q86VQ6 643 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 REM2Q8IYK8 340 aaPredicted RBP13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 GREM2Q9H772 168 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 IFT57Q9NWB7 429 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 HDAC9Q9UKV0 1011 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 MED23Q9ULK4 1368 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 HTTP42858 3142 aa13.28□□□□□ -0.28
CYSTM1-203ENST00000509589 MKI67P46013 3256 aaKnown RBP13.27□□□□□ -0.28
CYSTM1-203ENST00000509589 WNT10BO00744 389 aa13.27□□□□□ -0.29
CYSTM1-203ENST00000509589 KLRK1P26718 216 aa13.27□□□□□ -0.29
CYSTM1-203ENST00000509589 TTLL12Q14166 644 aaPredicted RBP13.27□□□□□ -0.29
CYSTM1-203ENST00000509589 TSPYL6Q8N831 410 aa13.27□□□□□ -0.29
CYSTM1-203ENST00000509589 TTLL11Q8NHH1 800 aa13.27□□□□□ -0.29
CYSTM1-203ENST00000509589 R3HDMLQ9H3Y0 253 aa13.27□□□□□ -0.29
CYSTM1-203ENST00000509589 CCT4P50991 539 aaKnown RBP13.26□□□□□ -0.29
CYSTM1-203ENST00000509589 BRCA2P51587 3418 aa13.26□□□□□ -0.29
CYSTM1-203ENST00000509589 PRKG1Q13976 671 aa13.26□□□□□ -0.29
CYSTM1-203ENST00000509589 PRPF38BQ5VTL8 546 aaKnown RBP13.26□□□□□ -0.29
CYSTM1-203ENST00000509589 ECM29Q5VYK3 1845 aa13.26□□□□□ -0.29
CYSTM1-203ENST00000509589 CDC5LQ99459 802 aaKnown RBP13.26□□□□□ -0.29
CYSTM1-203ENST00000509589 BSDC1Q9NW68 430 aaPredicted RBP13.26□□□□□ -0.29
CYSTM1-203ENST00000509589 FZD1Q9UP38 647 aa13.26□□□□□ -0.29
CYSTM1-203ENST00000509589 CENPFP49454 3210 aa13.25□□□□□ -0.29
CYSTM1-203ENST00000509589 PI4KAP2A4QPH2 592 aa13.25□□□□□ -0.29
CYSTM1-203ENST00000509589 GPR25O00155 361 aa13.25□□□□□ -0.29
CYSTM1-203ENST00000509589 TM4SF4P48230 202 aa13.25□□□□□ -0.29
CYSTM1-203ENST00000509589 GNAI1P63096 354 aa13.25□□□□□ -0.29
CYSTM1-203ENST00000509589 PTPN12Q05209 780 aaKnown RBP13.25□□□□□ -0.29
CYSTM1-203ENST00000509589 CWF19L2Q2TBE0 894 aaKnown RBP13.25□□□□□ -0.29
CYSTM1-203ENST00000509589 PI4KAP1Q8N8J0 262 aa13.25□□□□□ -0.29
CYSTM1-203ENST00000509589 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
CYSTM1-203ENST00000509589 DDX58O95786 925 aaKnown RBP13.24□□□□□ -0.29
CYSTM1-203ENST00000509589 PKN2Q16513 984 aaKnown RBP13.24□□□□□ -0.29
CYSTM1-203ENST00000509589 STRIP1Q5VSL9 837 aa13.24□□□□□ -0.29
CYSTM1-203ENST00000509589 CCDC30Q5VVM6 783 aa13.24□□□□□ -0.29
CYSTM1-203ENST00000509589 KSR2Q6VAB6 950 aa13.24□□□□□ -0.29
CYSTM1-203ENST00000509589 KIAA0825Q8IV33 1275 aa13.24□□□□□ -0.29
CYSTM1-203ENST00000509589 OGFOD1Q8N543 542 aa13.24□□□□□ -0.29
CYSTM1-203ENST00000509589 COA1Q9GZY4 146 aa13.24□□□□□ -0.29
CYSTM1-203ENST00000509589 NF2P35240 595 aa13.23□□□□□ -0.29
CYSTM1-203ENST00000509589 UBE3BQ7Z3V4 1068 aa13.23□□□□□ -0.29
CYSTM1-203ENST00000509589 MYO3BQ8WXR4 1341 aa13.22□□□□□ -0.29
CYSTM1-203ENST00000509589 NEURL1BA8MQ27 555 aa13.22□□□□□ -0.29
CYSTM1-203ENST00000509589 SPRYD7Q5W111 196 aa13.22□□□□□ -0.29
CYSTM1-203ENST00000509589 FBXO46Q6PJ61 603 aaPredicted RBP13.22□□□□□ -0.29
CYSTM1-203ENST00000509589 G2E3Q7L622 706 aa13.22□□□□□ -0.29
CYSTM1-203ENST00000509589 ZBED3Q96IU2 234 aaPredicted RBP13.22□□□□□ -0.29
CYSTM1-203ENST00000509589 PCDHAC2Q9Y5I4 1007 aa13.22□□□□□ -0.29
CYSTM1-203ENST00000509589 SSC5DA1L4H1 1573 aa13.22□□□□□ -0.29
CYSTM1-203ENST00000509589 ZNF804BA4D1E1 1349 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 H7C1W4 665 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 SNAP23O00161 211 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 FKTNO75072 461 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 GTF2IP78347 998 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 CALD1Q05682 793 aaKnown RBP13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 SREBF2Q12772 1141 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 NOM1Q5C9Z4 860 aaKnown RBP13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 LDLRAD1Q5T700 205 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 ARMC9Q7Z3E5 817 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 CFHR5Q9BXR6 569 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 PRKRIP1Q9H875 184 aaPredicted RBP13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 ANGEL1Q9UNK9 670 aaKnown RBP13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 LEMD3Q9Y2U8 911 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 CACNA1FO60840 1977 aa13.21□□□□□ -0.29
CYSTM1-203ENST00000509589 ITGA6P23229 1130 aa13.2□□□□□ -0.3
CYSTM1-203ENST00000509589 IGHMBP2P38935 993 aaKnown RBP13.2□□□□□ -0.3
CYSTM1-203ENST00000509589 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
CYSTM1-203ENST00000509589 APOBEC3FQ8IUX4 373 aaKnown RBP13.2□□□□□ -0.3
CYSTM1-203ENST00000509589 CERS5Q8N5B7 392 aa13.2□□□□□ -0.3
CYSTM1-203ENST00000509589 CLMNQ96JQ2 1002 aa13.2□□□□□ -0.3
CYSTM1-203ENST00000509589 AOX1Q06278 1338 aa13.19□□□□□ -0.3
CYSTM1-203ENST00000509589 IRS2Q9Y4H2 1338 aa13.19□□□□□ -0.3
CYSTM1-203ENST00000509589 CASP7P55210 303 aa13.19□□□□□ -0.3
CYSTM1-203ENST00000509589 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
CYSTM1-203ENST00000509589 DEFB129Q9H1M3 183 aa13.19□□□□□ -0.3
CYSTM1-203ENST00000509589 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
CYSTM1-203ENST00000509589 OTOFQ9HC10 1997 aa13.18□□□□□ -0.3
CYSTM1-203ENST00000509589 IGF2BP3O00425 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
CYSTM1-203ENST00000509589 CHRNDQ07001 517 aa13.18□□□□□ -0.3
CYSTM1-203ENST00000509589 GCKRQ14397 625 aa13.18□□□□□ -0.3
CYSTM1-203ENST00000509589 IFNL1Q8IU54 200 aa13.18□□□□□ -0.3
CYSTM1-203ENST00000509589 STK31Q9BXU1 1019 aa13.18□□□□□ -0.3
CYSTM1-203ENST00000509589 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
CYSTM1-203ENST00000509589 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 F8W031 263 aaPredicted RBP13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 TAF5LO75529 589 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 CSF1RP07333 972 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 KCNJ4P48050 445 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 DLGAP5Q15398 846 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 OTOP1Q7RTM1 612 aa13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 HELBQ8NG08 1087 aaPredicted RBP13.17□□□□□ -0.3
CYSTM1-203ENST00000509589 SLC10A4Q96EP9 437 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms