RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 A0A1B0GUL7 405 aa18.25■□□□□ 0.51
RNF4-213ENST00000509388 WTIPA6NIX2 430 aaPredicted RBP18.25■□□□□ 0.51
RNF4-213ENST00000509388 KIAA2012Q0VF49 1180 aa18.25■□□□□ 0.51
RNF4-213ENST00000509388 TNNI3KQ59H18 835 aa18.25■□□□□ 0.51
RNF4-213ENST00000509388 ANKRD45Q5TZF3 282 aa18.25■□□□□ 0.51
RNF4-213ENST00000509388 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
RNF4-213ENST00000509388 NIM1KQ8IY84 436 aa18.25■□□□□ 0.51
RNF4-213ENST00000509388 PPP4R2Q9NY27 417 aa18.25■□□□□ 0.51
RNF4-213ENST00000509388 FPGT-TNNI3KV9GXZ4 949 aa18.25■□□□□ 0.51
RNF4-213ENST00000509388 SNED1Q8TER0 1413 aa18.24■□□□□ 0.51
RNF4-213ENST00000509388 SPEF2Q9C093 1822 aa18.24■□□□□ 0.51
RNF4-213ENST00000509388 IFIT2P09913 472 aaKnown RBP18.24■□□□□ 0.51
RNF4-213ENST00000509388 FGFR2P21802 821 aa18.24■□□□□ 0.51
RNF4-213ENST00000509388 ZNF804AQ7Z570 1209 aa18.24■□□□□ 0.51
RNF4-213ENST00000509388 AACSQ86V21 672 aa18.24■□□□□ 0.51
RNF4-213ENST00000509388 RNF181Q9P0P0 153 aa18.24■□□□□ 0.51
RNF4-213ENST00000509388 MED23Q9ULK4 1368 aa18.24■□□□□ 0.51
RNF4-213ENST00000509388 ARFGEF1Q9Y6D6 1849 aa18.23■□□□□ 0.51
RNF4-213ENST00000509388 SMARCA5O60264 1052 aaPredicted RBP18.23■□□□□ 0.51
RNF4-213ENST00000509388 KLRK1P26718 216 aa18.23■□□□□ 0.51
RNF4-213ENST00000509388 HIBADHP31937 336 aaKnown RBP18.23■□□□□ 0.51
RNF4-213ENST00000509388 DOK7Q18PE1 504 aa18.23■□□□□ 0.51
RNF4-213ENST00000509388 C9orf131Q5VYM1 1079 aa18.23■□□□□ 0.51
RNF4-213ENST00000509388 C15orf52Q6ZUT6 534 aaKnown RBP18.23■□□□□ 0.51
RNF4-213ENST00000509388 SMC5Q8IY18 1101 aa18.23■□□□□ 0.51
RNF4-213ENST00000509388 COA1Q9GZY4 146 aa18.23■□□□□ 0.51
RNF4-213ENST00000509388 LRRC37AA6NMS7 1700 aa18.23■□□□□ 0.51
RNF4-213ENST00000509388 FRAT2O75474 233 aaPredicted RBP18.22■□□□□ 0.51
RNF4-213ENST00000509388 GYG1P46976 350 aa18.22■□□□□ 0.51
RNF4-213ENST00000509388 TXNRD3Q86VQ6 643 aa18.22■□□□□ 0.51
RNF4-213ENST00000509388 EAF2Q96CJ1 260 aaPredicted RBP18.22■□□□□ 0.51
RNF4-213ENST00000509388 XAGE2Q96GT9 111 aa18.22■□□□□ 0.51
RNF4-213ENST00000509388 CCDC8Q9H0W5 538 aaPredicted RBP18.22■□□□□ 0.51
RNF4-213ENST00000509388 GNL3LQ9NVN8 582 aaKnown RBP18.22■□□□□ 0.51
RNF4-213ENST00000509388 CCDC158Q5M9N0 1113 aa18.21■□□□□ 0.51
RNF4-213ENST00000509388 DBNDD1Q9H9R9 158 aa18.21■□□□□ 0.51
RNF4-213ENST00000509388 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.21■□□□□ 0.51
RNF4-213ENST00000509388 ECE2O60344 883 aa18.2■□□□□ 0.5
RNF4-213ENST00000509388 ADORA1P30542 326 aa18.2■□□□□ 0.5
RNF4-213ENST00000509388 BCAMP50895 628 aa18.2■□□□□ 0.5
RNF4-213ENST00000509388 CENPQQ7L2Z9 268 aaPredicted RBP18.2■□□□□ 0.5
RNF4-213ENST00000509388 PODNQ7Z5L7 613 aa18.2■□□□□ 0.5
RNF4-213ENST00000509388 FAM84BQ96KN1 310 aaPredicted RBP18.2■□□□□ 0.5
RNF4-213ENST00000509388 ZNRF3Q9ULT6 936 aa18.2■□□□□ 0.5
RNF4-213ENST00000509388 ZNF609O15014 1411 aa18.19■□□□□ 0.5
RNF4-213ENST00000509388 PRELPP51888 382 aa18.19■□□□□ 0.5
RNF4-213ENST00000509388 EIF6P56537 245 aaKnown RBP18.19■□□□□ 0.5
RNF4-213ENST00000509388 FBXO33Q7Z6M2 555 aa18.19■□□□□ 0.5
RNF4-213ENST00000509388 DBNDD2Q9BQY9 259 aa18.19■□□□□ 0.5
RNF4-213ENST00000509388 CD209Q9NNX6 404 aa18.19■□□□□ 0.5
RNF4-213ENST00000509388 DUOX1Q9NRD9 1551 aa18.18■□□□□ 0.5
RNF4-213ENST00000509388 TTC39AQ5SRH9 613 aa18.18■□□□□ 0.5
RNF4-213ENST00000509388 CCDC102BQ68D86 513 aa18.18■□□□□ 0.5
RNF4-213ENST00000509388 FBXW7Q969H0 707 aa18.18■□□□□ 0.5
RNF4-213ENST00000509388 GPATCH3Q96I76 525 aa18.18■□□□□ 0.5
RNF4-213ENST00000509388 DBNLQ9UJU6 430 aaKnown RBP18.18■□□□□ 0.5
RNF4-213ENST00000509388 NUCB1Q02818 461 aa18.17■□□□□ 0.5
RNF4-213ENST00000509388 CHD1LQ86WJ1 897 aa18.17■□□□□ 0.5
RNF4-213ENST00000509388 LNPKQ9C0E8 428 aa18.17■□□□□ 0.5
RNF4-213ENST00000509388 FER1L6Q2WGJ9 1857 aa18.17■□□□□ 0.5
RNF4-213ENST00000509388 IRS2Q9Y4H2 1338 aa18.17■□□□□ 0.5
RNF4-213ENST00000509388 UQCRFS1P1P0C7P4 283 aa18.16■□□□□ 0.5
RNF4-213ENST00000509388 IL1R1P14778 569 aa18.16■□□□□ 0.5
RNF4-213ENST00000509388 PHKA1P46020 1223 aa18.16■□□□□ 0.5
RNF4-213ENST00000509388 TLR7Q9NYK1 1049 aaKnown RBP18.16■□□□□ 0.5
RNF4-213ENST00000509388 IQSEC3Q9UPP2 1182 aaPredicted RBP18.16■□□□□ 0.5
RNF4-213ENST00000509388 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
RNF4-213ENST00000509388 FZD9O00144 591 aa18.15■□□□□ 0.5
RNF4-213ENST00000509388 CHAF1AQ13111 956 aaPredicted RBP18.15■□□□□ 0.5
RNF4-213ENST00000509388 TNIP1Q15025 636 aa18.15■□□□□ 0.5
RNF4-213ENST00000509388 DPY19L2Q6NUT2 758 aa18.15■□□□□ 0.5
RNF4-213ENST00000509388 TDRD7Q8NHU6 1098 aaKnown RBP18.15■□□□□ 0.5
RNF4-213ENST00000509388 SEMA3EO15041 775 aa18.14■□□□□ 0.49
RNF4-213ENST00000509388 RAD17O75943 681 aa18.14■□□□□ 0.49
RNF4-213ENST00000509388 GTF2IP78347 998 aa18.14■□□□□ 0.49
RNF4-213ENST00000509388 TTLL5Q6EMB2 1281 aa18.14■□□□□ 0.49
RNF4-213ENST00000509388 CIAPIN1Q6FI81 312 aa18.14■□□□□ 0.49
RNF4-213ENST00000509388 C16orf71Q8IYS4 520 aaPredicted RBP18.14■□□□□ 0.49
RNF4-213ENST00000509388 DENND2AQ9ULE3 1009 aa18.14■□□□□ 0.49
RNF4-213ENST00000509388 GJA3Q9Y6H8 435 aa18.14■□□□□ 0.49
RNF4-213ENST00000509388 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
RNF4-213ENST00000509388 ZC3H4Q9UPT8 1303 aaKnown RBP18.14■□□□□ 0.49
RNF4-213ENST00000509388 USP17L3A6NCW0 530 aa18.13■□□□□ 0.49
RNF4-213ENST00000509388 USP17L4A6NCW7 530 aa18.13■□□□□ 0.49
RNF4-213ENST00000509388 YDJCA8MPS7 323 aa18.13■□□□□ 0.49
RNF4-213ENST00000509388 CXCL9Q07325 125 aa18.13■□□□□ 0.49
RNF4-213ENST00000509388 USP17L1Q7RTZ2 530 aa18.13■□□□□ 0.49
RNF4-213ENST00000509388 ECHDC1Q9NTX5 307 aa18.13■□□□□ 0.49
RNF4-213ENST00000509388 STRIP1Q5VSL9 837 aa18.12■□□□□ 0.49
RNF4-213ENST00000509388 KCNQ5Q9NR82 932 aa18.12■□□□□ 0.49
RNF4-213ENST00000509388 JAG2Q9Y219 1238 aa18.12■□□□□ 0.49
RNF4-213ENST00000509388 ERC2O15083 957 aa18.11■□□□□ 0.49
RNF4-213ENST00000509388 MX1P20591 662 aa18.11■□□□□ 0.49
RNF4-213ENST00000509388 ARID4AP29374 1257 aaPredicted RBP18.11■□□□□ 0.49
RNF4-213ENST00000509388 WDR66Q8TBY9 1149 aa18.11■□□□□ 0.49
RNF4-213ENST00000509388 ZNF512BQ96KM6 892 aaPredicted RBP18.11■□□□□ 0.49
RNF4-213ENST00000509388 TTC41PQ6P2S7 1318 aa18.1■□□□□ 0.49
RNF4-213ENST00000509388 PSMD14O00487 310 aa18.1■□□□□ 0.49
RNF4-213ENST00000509388 RASGRF1Q13972 1273 aa18.1■□□□□ 0.49
RNF4-213ENST00000509388 GPC2Q8N158 579 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms