RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 ANKRD18AQ8IVF6 992 aa13.24□□□□□ -0.29
COPS4-207ENST00000509317 POTEFA5A3E0 1075 aa13.23□□□□□ -0.29
COPS4-207ENST00000509317 PDE8AO60658 829 aa13.23□□□□□ -0.29
COPS4-207ENST00000509317 PCCAP05165 728 aaPredicted RBP13.23□□□□□ -0.29
COPS4-207ENST00000509317 HOXB7P09629 217 aa13.23□□□□□ -0.29
COPS4-207ENST00000509317 FKTNO75072 461 aa13.22□□□□□ -0.29
COPS4-207ENST00000509317 ATP2B4P23634 1241 aa13.22□□□□□ -0.29
COPS4-207ENST00000509317 PODNQ7Z5L7 613 aa13.22□□□□□ -0.29
COPS4-207ENST00000509317 KIAA0825Q8IV33 1275 aa13.22□□□□□ -0.29
COPS4-207ENST00000509317 CLMNQ96JQ2 1002 aa13.22□□□□□ -0.29
COPS4-207ENST00000509317 GREM2Q9H772 168 aa13.22□□□□□ -0.29
COPS4-207ENST00000509317 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
COPS4-207ENST00000509317 MINPP1Q9UNW1 487 aa13.22□□□□□ -0.29
COPS4-207ENST00000509317 PCDHAC2Q9Y5I4 1007 aa13.22□□□□□ -0.29
COPS4-207ENST00000509317 CTSWP56202 376 aa13.21□□□□□ -0.29
COPS4-207ENST00000509317 SPRYD7Q5W111 196 aa13.21□□□□□ -0.29
COPS4-207ENST00000509317 CCDC191Q8NCU4 936 aa13.21□□□□□ -0.29
COPS4-207ENST00000509317 RUNDC1Q96C34 613 aa13.21□□□□□ -0.29
COPS4-207ENST00000509317 ANGEL1Q9UNK9 670 aaKnown RBP13.21□□□□□ -0.29
COPS4-207ENST00000509317 TRIM17Q9Y577 477 aa13.21□□□□□ -0.29
COPS4-207ENST00000509317 CCT4P50991 539 aaKnown RBP13.2□□□□□ -0.3
COPS4-207ENST00000509317 CAP1Q01518 475 aa13.2□□□□□ -0.3
COPS4-207ENST00000509317 SREBF2Q12772 1141 aa13.2□□□□□ -0.3
COPS4-207ENST00000509317 HABP4Q5JVS0 413 aaKnown RBP13.2□□□□□ -0.3
COPS4-207ENST00000509317 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
COPS4-207ENST00000509317 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
COPS4-207ENST00000509317 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
COPS4-207ENST00000509317 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
COPS4-207ENST00000509317 AOX1Q06278 1338 aa13.19□□□□□ -0.3
COPS4-207ENST00000509317 PSME4Q14997 1843 aa13.19□□□□□ -0.3
COPS4-207ENST00000509317 SNAP23O00161 211 aa13.19□□□□□ -0.3
COPS4-207ENST00000509317 IGF2BP3O00425 579 aaKnown RBP eCLIP13.19□□□□□ -0.3
COPS4-207ENST00000509317 IGKV5-2P06315 115 aa13.19□□□□□ -0.3
COPS4-207ENST00000509317 NF2P35240 595 aa13.19□□□□□ -0.3
COPS4-207ENST00000509317 LDLRAD1Q5T700 205 aa13.19□□□□□ -0.3
COPS4-207ENST00000509317 OTOP1Q7RTM1 612 aa13.19□□□□□ -0.3
COPS4-207ENST00000509317 ARMC9Q7Z3E5 817 aa13.19□□□□□ -0.3
COPS4-207ENST00000509317 TTLL11Q8NHH1 800 aa13.19□□□□□ -0.3
COPS4-207ENST00000509317 METTL22Q9BUU2 404 aaPredicted RBP13.19□□□□□ -0.3
COPS4-207ENST00000509317 MAP3K2Q9Y2U5 619 aa13.19□□□□□ -0.3
COPS4-207ENST00000509317 ZNF853P0CG23 659 aa13.18□□□□□ -0.3
COPS4-207ENST00000509317 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
COPS4-207ENST00000509317 NOM1Q5C9Z4 860 aaKnown RBP13.18□□□□□ -0.3
COPS4-207ENST00000509317 STRIP1Q5VSL9 837 aa13.18□□□□□ -0.3
COPS4-207ENST00000509317 CDC5LQ99459 802 aaKnown RBP13.18□□□□□ -0.3
COPS4-207ENST00000509317 BSDC1Q9NW68 430 aaPredicted RBP13.18□□□□□ -0.3
COPS4-207ENST00000509317 SSC5DA1L4H1 1573 aa13.18□□□□□ -0.3
COPS4-207ENST00000509317 ZNF646O15015 1829 aaPredicted RBP13.18□□□□□ -0.3
COPS4-207ENST00000509317 HSP90B1P14625 803 aaKnown RBP13.17□□□□□ -0.3
COPS4-207ENST00000509317 EN2P19622 333 aaPredicted RBP13.17□□□□□ -0.3
COPS4-207ENST00000509317 GTF2IP78347 998 aa13.17□□□□□ -0.3
COPS4-207ENST00000509317 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
COPS4-207ENST00000509317 RALBP1Q15311 655 aa13.17□□□□□ -0.3
COPS4-207ENST00000509317 TTLL5Q6EMB2 1281 aa13.17□□□□□ -0.3
COPS4-207ENST00000509317 IFNL1Q8IU54 200 aa13.17□□□□□ -0.3
COPS4-207ENST00000509317 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
COPS4-207ENST00000509317 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
COPS4-207ENST00000509317 ZBED3Q96IU2 234 aaPredicted RBP13.17□□□□□ -0.3
COPS4-207ENST00000509317 CFHR5Q9BXR6 569 aa13.17□□□□□ -0.3
COPS4-207ENST00000509317 DEFB129Q9H1M3 183 aa13.17□□□□□ -0.3
COPS4-207ENST00000509317 JAG2Q9Y219 1238 aa13.17□□□□□ -0.3
COPS4-207ENST00000509317 CLRN2A0PK11 232 aa13.16□□□□□ -0.3
COPS4-207ENST00000509317 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
COPS4-207ENST00000509317 F8W031 263 aaPredicted RBP13.16□□□□□ -0.3
COPS4-207ENST00000509317 GJA5P36382 358 aa13.16□□□□□ -0.3
COPS4-207ENST00000509317 APOBEC3FQ8IUX4 373 aaKnown RBP13.16□□□□□ -0.3
COPS4-207ENST00000509317 CERS5Q8N5B7 392 aa13.16□□□□□ -0.3
COPS4-207ENST00000509317 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
COPS4-207ENST00000509317 SLC10A4Q96EP9 437 aa13.16□□□□□ -0.3
COPS4-207ENST00000509317 WNK4Q96J92 1243 aa13.16□□□□□ -0.3
COPS4-207ENST00000509317 COA1Q9GZY4 146 aa13.16□□□□□ -0.3
COPS4-207ENST00000509317 SPEF2Q9C093 1822 aa13.16□□□□□ -0.3
COPS4-207ENST00000509317 ZNF804BA4D1E1 1349 aa13.15□□□□□ -0.3
COPS4-207ENST00000509317 MYBBP1AQ9BQG0 1328 aaKnown RBP13.15□□□□□ -0.3
COPS4-207ENST00000509317 APAF1O14727 1248 aa13.15□□□□□ -0.3
COPS4-207ENST00000509317 CRHR2Q13324 411 aa13.15□□□□□ -0.3
COPS4-207ENST00000509317 UBE3BQ7Z3V4 1068 aa13.15□□□□□ -0.3
COPS4-207ENST00000509317 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
COPS4-207ENST00000509317 MANSC4A6NHS7 340 aaPredicted RBP13.14□□□□□ -0.31
COPS4-207ENST00000509317 MYCP01106 439 aaPredicted RBP13.14□□□□□ -0.31
COPS4-207ENST00000509317 NBPF12Q5TAG4 269 aaPredicted RBP13.14□□□□□ -0.31
COPS4-207ENST00000509317 G2E3Q7L622 706 aa13.14□□□□□ -0.31
COPS4-207ENST00000509317 HELBQ8NG08 1087 aaPredicted RBP13.14□□□□□ -0.31
COPS4-207ENST00000509317 PTPN18Q99952 460 aa13.14□□□□□ -0.31
COPS4-207ENST00000509317 IFT57Q9NWB7 429 aa13.14□□□□□ -0.31
COPS4-207ENST00000509317 SZT2Q5T011 3432 aa13.14□□□□□ -0.31
COPS4-207ENST00000509317 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
COPS4-207ENST00000509317 TAF5LO75529 589 aa13.13□□□□□ -0.31
COPS4-207ENST00000509317 DDX58O95786 925 aaKnown RBP13.13□□□□□ -0.31
COPS4-207ENST00000509317 ITGA6P23229 1130 aa13.13□□□□□ -0.31
COPS4-207ENST00000509317 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.31
COPS4-207ENST00000509317 DDX10Q13206 875 aaKnown RBP13.13□□□□□ -0.31
COPS4-207ENST00000509317 DLGAP5Q15398 846 aa13.13□□□□□ -0.31
COPS4-207ENST00000509317 KSR2Q6VAB6 950 aa13.13□□□□□ -0.31
COPS4-207ENST00000509317 CDAN1Q8IWY9 1227 aa13.13□□□□□ -0.31
COPS4-207ENST00000509317 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
COPS4-207ENST00000509317 VEZTQ9HBM0 779 aa13.13□□□□□ -0.31
COPS4-207ENST00000509317 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
COPS4-207ENST00000509317 ALDH1A1P00352 501 aa13.12□□□□□ -0.31
COPS4-207ENST00000509317 IGHMBP2P38935 993 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms