RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CCDC102AQ96A19 550 aa13.93□□□□□ -0.18
RNF4-212ENST00000509258 PLA2G12BQ9BX93 195 aa13.93□□□□□ -0.18
RNF4-212ENST00000509258 MCOLN1Q9GZU1 580 aa13.93□□□□□ -0.18
RNF4-212ENST00000509258 FAM155AB1AL88 458 aaPredicted RBP13.92□□□□□ -0.18
RNF4-212ENST00000509258 KLRK1P26718 216 aa13.92□□□□□ -0.18
RNF4-212ENST00000509258 ZNF280AP59817 542 aaPredicted RBP13.92□□□□□ -0.18
RNF4-212ENST00000509258 RSBN1LQ6PCB5 846 aaPredicted RBP13.92□□□□□ -0.18
RNF4-212ENST00000509258 TXNRD3Q86VQ6 643 aa13.92□□□□□ -0.18
RNF4-212ENST00000509258 LINS1Q8NG48 757 aa13.92□□□□□ -0.18
RNF4-212ENST00000509258 ZIC5Q96T25 663 aa13.92□□□□□ -0.18
RNF4-212ENST00000509258 CDC5LQ99459 802 aaKnown RBP13.92□□□□□ -0.18
RNF4-212ENST00000509258 SAGE1Q9NXZ1 904 aa13.92□□□□□ -0.18
RNF4-212ENST00000509258 MINPP1Q9UNW1 487 aa13.92□□□□□ -0.18
RNF4-212ENST00000509258 ASTN2O75129 1339 aaPredicted RBP13.91□□□□□ -0.18
RNF4-212ENST00000509258 SNAP23O00161 211 aa13.91□□□□□ -0.18
RNF4-212ENST00000509258 CSF1RP07333 972 aa13.91□□□□□ -0.18
RNF4-212ENST00000509258 ZNF157P51786 506 aaPredicted RBP13.91□□□□□ -0.18
RNF4-212ENST00000509258 FOXO4P98177 505 aa13.91□□□□□ -0.18
RNF4-212ENST00000509258 MLLT1Q03111 559 aaPredicted RBP13.91□□□□□ -0.18
RNF4-212ENST00000509258 CDCA5Q96FF9 252 aa13.91□□□□□ -0.18
RNF4-212ENST00000509258 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
RNF4-212ENST00000509258 SLC10A3P09131 477 aa13.9□□□□□ -0.18
RNF4-212ENST00000509258 USP17L8P0C7I0 530 aa13.9□□□□□ -0.18
RNF4-212ENST00000509258 ITGA6P23229 1130 aa13.9□□□□□ -0.18
RNF4-212ENST00000509258 ATP2B4P23634 1241 aa13.9□□□□□ -0.18
RNF4-212ENST00000509258 DGKZQ13574 1117 aa13.9□□□□□ -0.18
RNF4-212ENST00000509258 ANGEL2Q5VTE6 544 aaKnown RBP13.9□□□□□ -0.18
RNF4-212ENST00000509258 PODNQ7Z5L7 613 aa13.9□□□□□ -0.18
RNF4-212ENST00000509258 MXD3Q9BW11 206 aa13.9□□□□□ -0.18
RNF4-212ENST00000509258 MYH16Q9H6N6 1097 aa13.9□□□□□ -0.18
RNF4-212ENST00000509258 BSDC1Q9NW68 430 aaPredicted RBP13.9□□□□□ -0.18
RNF4-212ENST00000509258 MED23Q9ULK4 1368 aa13.9□□□□□ -0.18
RNF4-212ENST00000509258 PITPNM2Q9BZ72 1349 aa13.9□□□□□ -0.19
RNF4-212ENST00000509258 RGS19P49795 217 aa13.89□□□□□ -0.19
RNF4-212ENST00000509258 FKBP1BP68106 108 aa13.89□□□□□ -0.19
RNF4-212ENST00000509258 KIF23Q02241 960 aaPredicted RBP13.89□□□□□ -0.19
RNF4-212ENST00000509258 SCARF1Q14162 830 aa13.89□□□□□ -0.19
RNF4-212ENST00000509258 MYOZ2Q9NPC6 264 aa13.89□□□□□ -0.19
RNF4-212ENST00000509258 CASP8AP2Q9UKL3 1982 aa13.89□□□□□ -0.19
RNF4-212ENST00000509258 IRS2Q9Y4H2 1338 aa13.89□□□□□ -0.19
RNF4-212ENST00000509258 PAPPA2Q9BXP8 1791 aa13.88□□□□□ -0.19
RNF4-212ENST00000509258 USP17L3A6NCW0 530 aa13.88□□□□□ -0.19
RNF4-212ENST00000509258 USP17L4A6NCW7 530 aa13.88□□□□□ -0.19
RNF4-212ENST00000509258 CCT4P50991 539 aaKnown RBP13.88□□□□□ -0.19
RNF4-212ENST00000509258 USP17L1Q7RTZ2 530 aa13.88□□□□□ -0.19
RNF4-212ENST00000509258 MRPL50Q8N5N7 158 aaKnown RBP13.88□□□□□ -0.19
RNF4-212ENST00000509258 KAZALD1Q96I82 304 aa13.88□□□□□ -0.19
RNF4-212ENST00000509258 GMLQ99445 158 aa13.88□□□□□ -0.19
RNF4-212ENST00000509258 SLFN5Q08AF3 891 aa13.87□□□□□ -0.19
RNF4-212ENST00000509258 REM2Q8IYK8 340 aaPredicted RBP13.87□□□□□ -0.19
RNF4-212ENST00000509258 ZNF594Q96JF6 807 aaPredicted RBP13.87□□□□□ -0.19
RNF4-212ENST00000509258 MYO3BQ8WXR4 1341 aa13.87□□□□□ -0.19
RNF4-212ENST00000509258 ECM29Q5VYK3 1845 aa13.86□□□□□ -0.19
RNF4-212ENST00000509258 RASAL3Q86YV0 1011 aa13.86□□□□□ -0.19
RNF4-212ENST00000509258 OGFOD1Q8N543 542 aa13.86□□□□□ -0.19
RNF4-212ENST00000509258 HELBQ8NG08 1087 aaPredicted RBP13.86□□□□□ -0.19
RNF4-212ENST00000509258 SSH1Q8WYL5 1049 aa13.86□□□□□ -0.19
RNF4-212ENST00000509258 RNF186Q9NXI6 227 aa13.86□□□□□ -0.19
RNF4-212ENST00000509258 GRM8O00222 908 aa13.85□□□□□ -0.19
RNF4-212ENST00000509258 TAF5LO75529 589 aa13.85□□□□□ -0.19
RNF4-212ENST00000509258 TRPA1O75762 1119 aa13.85□□□□□ -0.19
RNF4-212ENST00000509258 IGHMBP2P38935 993 aaKnown RBP13.85□□□□□ -0.19
RNF4-212ENST00000509258 CHRNDQ07001 517 aa13.85□□□□□ -0.19
RNF4-212ENST00000509258 SLC4A10Q6U841 1118 aa13.85□□□□□ -0.19
RNF4-212ENST00000509258 LMBR1LQ6UX01 489 aa13.85□□□□□ -0.19
RNF4-212ENST00000509258 SUCLG2Q96I99 432 aa13.85□□□□□ -0.19
RNF4-212ENST00000509258 COA1Q9GZY4 146 aa13.85□□□□□ -0.19
RNF4-212ENST00000509258 SCAF8Q9UPN6 1271 aaKnown RBP13.85□□□□□ -0.19
RNF4-212ENST00000509258 NBPF7P0C2Y1 421 aaPredicted RBP13.84□□□□□ -0.19
RNF4-212ENST00000509258 DACT2Q5SW24 774 aa13.84□□□□□ -0.19
RNF4-212ENST00000509258 STRIP1Q5VSL9 837 aa13.84□□□□□ -0.19
RNF4-212ENST00000509258 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
RNF4-212ENST00000509258 CSRNP1Q96S65 589 aa13.84□□□□□ -0.19
RNF4-212ENST00000509258 LEMD3Q9Y2U8 911 aa13.84□□□□□ -0.19
RNF4-212ENST00000509258 CHMP3Q9Y3E7 222 aa13.84□□□□□ -0.19
RNF4-212ENST00000509258 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
RNF4-212ENST00000509258 ANKRD18BA2A2Z9 1011 aa13.83□□□□□ -0.2
RNF4-212ENST00000509258 E9PSI1 815 aa13.83□□□□□ -0.2
RNF4-212ENST00000509258 ALDH1L1O75891 902 aa13.83□□□□□ -0.2
RNF4-212ENST00000509258 SLC34A2O95436 690 aa13.83□□□□□ -0.2
RNF4-212ENST00000509258 NF2P35240 595 aa13.83□□□□□ -0.2
RNF4-212ENST00000509258 MMP14P50281 582 aa13.83□□□□□ -0.2
RNF4-212ENST00000509258 FBXW7Q969H0 707 aa13.83□□□□□ -0.2
RNF4-212ENST00000509258 ARAP2Q8WZ64 1704 aa13.83□□□□□ -0.2
RNF4-212ENST00000509258 AKAP11Q9UKA4 1901 aa13.82□□□□□ -0.2
RNF4-212ENST00000509258 WNT10BO00744 389 aa13.82□□□□□ -0.2
RNF4-212ENST00000509258 NBPF9Q3BBW0 867 aa13.82□□□□□ -0.2
RNF4-212ENST00000509258 MPHOSPH8Q99549 860 aa13.82□□□□□ -0.2
RNF4-212ENST00000509258 PUS3Q9BZE2 481 aaKnown RBP13.82□□□□□ -0.2
RNF4-212ENST00000509258 SRCIN1Q9C0H9 1055 aa13.82□□□□□ -0.2
RNF4-212ENST00000509258 ANKRD2Q9GZV1 360 aa13.82□□□□□ -0.2
RNF4-212ENST00000509258 UTYO14607 1347 aa13.82□□□□□ -0.2
RNF4-212ENST00000509258 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
RNF4-212ENST00000509258 TTLL12Q14166 644 aaPredicted RBP13.81□□□□□ -0.2
RNF4-212ENST00000509258 CTU1Q7Z7A3 348 aaKnown RBP13.81□□□□□ -0.2
RNF4-212ENST00000509258 ANKRD44Q8N8A2 993 aa13.81□□□□□ -0.2
RNF4-212ENST00000509258 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
RNF4-212ENST00000509258 PCDHAC2Q9Y5I4 1007 aa13.81□□□□□ -0.2
RNF4-212ENST00000509258 MYH13Q9UKX3 1938 aa13.81□□□□□ -0.2
RNF4-212ENST00000509258 CCER2I3L3R5 266 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms