RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 FLAD1Q8NFF5 587 aa10.13□□□□□ -0.79
CCSER1-208ENST00000509109 SYT17Q9BSW7 474 aa10.13□□□□□ -0.79
CCSER1-208ENST00000509109 TMPRSS4Q9NRS4 437 aa10.13□□□□□ -0.79
CCSER1-208ENST00000509109 POLKQ9UBT6 870 aa10.13□□□□□ -0.79
CCSER1-208ENST00000509109 PCDHB9Q9Y5E1 797 aa10.13□□□□□ -0.79
CCSER1-208ENST00000509109 TNNT2P45379 298 aaPredicted RBP10.12□□□□□ -0.79
CCSER1-208ENST00000509109 DHX9Q08211 1270 aaKnown RBP10.12□□□□□ -0.79
CCSER1-208ENST00000509109 PANK3Q9H999 370 aa10.12□□□□□ -0.79
CCSER1-208ENST00000509109 TMOD3Q9NYL9 352 aa10.12□□□□□ -0.79
CCSER1-208ENST00000509109 IGSF1Q8N6C5 1336 aa10.11□□□□□ -0.79
CCSER1-208ENST00000509109 UBR3Q6ZT12 1888 aa10.11□□□□□ -0.79
CCSER1-208ENST00000509109 EIF4A2Q14240 407 aaKnown RBP10.11□□□□□ -0.79
CCSER1-208ENST00000509109 IFNL2Q8IZJ0 200 aa10.11□□□□□ -0.79
CCSER1-208ENST00000509109 NXF1Q9UBU9 619 aaKnown RBP10.11□□□□□ -0.79
CCSER1-208ENST00000509109 KNSTRNQ9Y448 316 aa10.11□□□□□ -0.79
CCSER1-208ENST00000509109 ZNF831Q5JPB2 1677 aa10.11□□□□□ -0.79
CCSER1-208ENST00000509109 HSP90AB1P08238 724 aaKnown RBP10.1□□□□□ -0.79
CCSER1-208ENST00000509109 KCNQ4P56696 695 aa10.1□□□□□ -0.79
CCSER1-208ENST00000509109 LCE2CQ5TA81 110 aa10.1□□□□□ -0.79
CCSER1-208ENST00000509109 MORC1Q86VD1 984 aa10.1□□□□□ -0.79
CCSER1-208ENST00000509109 AGBL1Q96MI9 1066 aa10.1□□□□□ -0.79
CCSER1-208ENST00000509109 TSEN34Q9BSV6 310 aaKnown RBP10.1□□□□□ -0.79
CCSER1-208ENST00000509109 NDUFB9Q9Y6M9 179 aa10.1□□□□□ -0.79
CCSER1-208ENST00000509109 ERVH48-1M5A8F1 160 aa10.09□□□□□ -0.79
CCSER1-208ENST00000509109 MAN1A2O60476 641 aa10.09□□□□□ -0.79
CCSER1-208ENST00000509109 PHKG2P15735 406 aa10.09□□□□□ -0.79
CCSER1-208ENST00000509109 GPR37L1O60883 481 aa10.08□□□□□ -0.8
CCSER1-208ENST00000509109 AMOTQ4VCS5 1084 aa10.08□□□□□ -0.8
CCSER1-208ENST00000509109 PLEKHO1Q53GL0 409 aaPredicted RBP10.08□□□□□ -0.8
CCSER1-208ENST00000509109 Q6ZVU0 165 aa10.08□□□□□ -0.8
CCSER1-208ENST00000509109 ZNF784Q8NCA9 323 aaPredicted RBP10.08□□□□□ -0.8
CCSER1-208ENST00000509109 PIGBQ92521 554 aa10.08□□□□□ -0.8
CCSER1-208ENST00000509109 LOC102724428A0A0B4J2F2 783 aa10.07□□□□□ -0.8
CCSER1-208ENST00000509109 GIGYF1O75420 1035 aaPredicted RBP10.07□□□□□ -0.8
CCSER1-208ENST00000509109 SSFA2P28290 1259 aa10.07□□□□□ -0.8
CCSER1-208ENST00000509109 SIK1P57059 783 aa10.07□□□□□ -0.8
CCSER1-208ENST00000509109 RELBQ01201 579 aa10.07□□□□□ -0.8
CCSER1-208ENST00000509109 GPR162Q16538 588 aa10.07□□□□□ -0.8
CCSER1-208ENST00000509109 C1orf141Q5JVX7 400 aa10.07□□□□□ -0.8
CCSER1-208ENST00000509109 COL23A1Q86Y22 540 aaPredicted RBP10.07□□□□□ -0.8
CCSER1-208ENST00000509109 DCAF5Q96JK2 942 aa10.07□□□□□ -0.8
CCSER1-208ENST00000509109 COL5A3P25940 1745 aaPredicted RBP10.07□□□□□ -0.8
CCSER1-208ENST00000509109 KIF7Q2M1P5 1343 aa10.07□□□□□ -0.8
CCSER1-208ENST00000509109 KDRP35968 1356 aa10.06□□□□□ -0.8
CCSER1-208ENST00000509109 ESPNB1AK53 854 aa10.06□□□□□ -0.8
CCSER1-208ENST00000509109 ERVV-2B6SEH9 535 aa10.06□□□□□ -0.8
CCSER1-208ENST00000509109 NR1H3Q13133 447 aa10.06□□□□□ -0.8
CCSER1-208ENST00000509109 DNMT3LQ9UJW3 386 aa10.06□□□□□ -0.8
CCSER1-208ENST00000509109 SCN11AQ9UI33 1791 aa10.06□□□□□ -0.8
CCSER1-208ENST00000509109 CICQ96RK0 1608 aaPredicted RBP10.05□□□□□ -0.8
CCSER1-208ENST00000509109 FIGNL2A6NMB9 653 aa10.05□□□□□ -0.8
CCSER1-208ENST00000509109 ZNF530Q6P9A1 599 aaPredicted RBP10.05□□□□□ -0.8
CCSER1-208ENST00000509109 ZNF395Q9H8N7 513 aaPredicted RBP10.05□□□□□ -0.8
CCSER1-208ENST00000509109 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
CCSER1-208ENST00000509109 APBB1O00213 710 aa10.04□□□□□ -0.8
CCSER1-208ENST00000509109 ADD1P35611 737 aaKnown RBP10.04□□□□□ -0.8
CCSER1-208ENST00000509109 MSL1Q68DK7 614 aa10.04□□□□□ -0.8
CCSER1-208ENST00000509109 CYLDQ9NQC7 956 aa10.04□□□□□ -0.8
CCSER1-208ENST00000509109 CD2APQ9Y5K6 639 aa10.04□□□□□ -0.8
CCSER1-208ENST00000509109 VIRMAQ69YN4 1812 aaKnown RBP10.04□□□□□ -0.8
CCSER1-208ENST00000509109 KDM6AO15550 1401 aaPredicted RBP10.04□□□□□ -0.8
CCSER1-208ENST00000509109 TTLL8A6PVC2 850 aa10.03□□□□□ -0.8
CCSER1-208ENST00000509109 GRIN3BO60391 1043 aa10.03□□□□□ -0.8
CCSER1-208ENST00000509109 LILRA1O75019 489 aa10.03□□□□□ -0.8
CCSER1-208ENST00000509109 MTHFSP49914 203 aa10.03□□□□□ -0.8
CCSER1-208ENST00000509109 CABP4P57796 275 aa10.03□□□□□ -0.8
CCSER1-208ENST00000509109 SULT6B1Q6IMI4 303 aa10.03□□□□□ -0.8
CCSER1-208ENST00000509109 LINC00116Q8NCU8 138 aa10.03□□□□□ -0.8
CCSER1-208ENST00000509109 ATG3Q9NT62 314 aa10.03□□□□□ -0.8
CCSER1-208ENST00000509109 ASAP1Q9ULH1 1129 aa10.03□□□□□ -0.8
CCSER1-208ENST00000509109 NPC1L1Q9UHC9 1359 aa10.02□□□□□ -0.8
CCSER1-208ENST00000509109 C4AP0C0L4 1744 aa10.02□□□□□ -0.8
CCSER1-208ENST00000509109 SPINT1O43278 529 aa10.02□□□□□ -0.81
CCSER1-208ENST00000509109 AEBP1Q8IUX7 1158 aa10.02□□□□□ -0.81
CCSER1-208ENST00000509109 NLGN2Q8NFZ4 835 aa10.02□□□□□ -0.81
CCSER1-208ENST00000509109 INSM2Q96T92 566 aaPredicted RBP10.02□□□□□ -0.81
CCSER1-208ENST00000509109 RTCBQ9Y3I0 505 aaKnown RBP10.02□□□□□ -0.81
CCSER1-208ENST00000509109 CNTNAP4Q9C0A0 1308 aa10.02□□□□□ -0.81
CCSER1-208ENST00000509109 H3BM21 787 aa10.01□□□□□ -0.81
CCSER1-208ENST00000509109 IL13P35225 146 aa10.01□□□□□ -0.81
CCSER1-208ENST00000509109 CTSOP43234 321 aaPredicted RBP10.01□□□□□ -0.81
CCSER1-208ENST00000509109 ITPK1Q13572 414 aa10.01□□□□□ -0.81
CCSER1-208ENST00000509109 MRC1P22897 1456 aa10.01□□□□□ -0.81
CCSER1-208ENST00000509109 TJP1Q07157 1748 aa10.01□□□□□ -0.81
CCSER1-208ENST00000509109 KIF13BQ9NQT8 1826 aa10□□□□□ -0.81
CCSER1-208ENST00000509109 ADH1AP07327 375 aa10□□□□□ -0.81
CCSER1-208ENST00000509109 AKAP4Q5JQC9 854 aa10□□□□□ -0.81
CCSER1-208ENST00000509109 POLMQ9NP87 494 aaPredicted RBP10□□□□□ -0.81
CCSER1-208ENST00000509109 ZNF330Q9Y3S2 320 aaPredicted RBP10□□□□□ -0.81
CCSER1-208ENST00000509109 ERBB4Q15303 1308 aa10□□□□□ -0.81
CCSER1-208ENST00000509109 ADAMTS7Q9UKP4 1686 aa9.99□□□□□ -0.81
CCSER1-208ENST00000509109 DIAPH1O60610 1272 aaKnown RBP9.99□□□□□ -0.81
CCSER1-208ENST00000509109 GMPRP36959 345 aa9.99□□□□□ -0.81
CCSER1-208ENST00000509109 CC2D1BQ5T0F9 858 aaKnown RBP9.99□□□□□ -0.81
CCSER1-208ENST00000509109 TRAPPC3LQ5T215 181 aa9.99□□□□□ -0.81
CCSER1-208ENST00000509109 NPAS3Q8IXF0 933 aa9.99□□□□□ -0.81
CCSER1-208ENST00000509109 NLGN1Q8N2Q7 840 aa9.99□□□□□ -0.81
CCSER1-208ENST00000509109 IRF7Q92985 503 aa9.99□□□□□ -0.81
CCSER1-208ENST00000509109 RFC4P35249 363 aa9.98□□□□□ -0.81
CCSER1-208ENST00000509109 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms