RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 CHADLQ6NUI6 762 aa22.78■■□□□ 1.24
CLDND1-220ENST00000508902 ATG9AQ7Z3C6 839 aa22.78■■□□□ 1.24
CLDND1-220ENST00000508902 LDHDQ86WU2 507 aa22.78■■□□□ 1.24
CLDND1-220ENST00000508902 PANK1Q8TE04 598 aa22.78■■□□□ 1.24
CLDND1-220ENST00000508902 GMLQ99445 158 aa22.78■■□□□ 1.24
CLDND1-220ENST00000508902 PA2G4Q9UQ80 394 aaKnown RBP22.78■■□□□ 1.24
CLDND1-220ENST00000508902 DZIP1LQ8IYY4 767 aaKnown RBP22.77■■□□□ 1.24
CLDND1-220ENST00000508902 LMOD1P29536 600 aaPredicted RBP22.76■■□□□ 1.23
CLDND1-220ENST00000508902 MTX1Q13505 466 aa22.76■■□□□ 1.23
CLDND1-220ENST00000508902 DACT2Q5SW24 774 aa22.76■■□□□ 1.23
CLDND1-220ENST00000508902 PODNQ7Z5L7 613 aa22.76■■□□□ 1.23
CLDND1-220ENST00000508902 MICALL2Q8IY33 904 aa22.76■■□□□ 1.23
CLDND1-220ENST00000508902 COA1Q9GZY4 146 aa22.76■■□□□ 1.23
CLDND1-220ENST00000508902 CNOT7Q9UIV1 285 aaKnown RBP22.76■■□□□ 1.23
CLDND1-220ENST00000508902 RCAN3Q9UKA8 241 aa22.76■■□□□ 1.23
CLDND1-220ENST00000508902 ITGBL1O95965 494 aaPredicted RBP22.75■■□□□ 1.23
CLDND1-220ENST00000508902 GNAI3P08754 354 aa22.75■■□□□ 1.23
CLDND1-220ENST00000508902 RSBN1LQ6PCB5 846 aaPredicted RBP22.75■■□□□ 1.23
CLDND1-220ENST00000508902 DPF2Q92785 391 aa22.75■■□□□ 1.23
CLDND1-220ENST00000508902 CD209Q9NNX6 404 aa22.75■■□□□ 1.23
CLDND1-220ENST00000508902 ADARB2Q9NS39 739 aaKnown RBP22.75■■□□□ 1.23
CLDND1-220ENST00000508902 POLR2AP24928 1970 aaKnown RBP22.75■■□□□ 1.23
CLDND1-220ENST00000508902 PASKQ96RG2 1323 aa22.75■■□□□ 1.23
CLDND1-220ENST00000508902 ARAP2Q8WZ64 1704 aa22.74■■□□□ 1.23
CLDND1-220ENST00000508902 EYA2O00167 538 aa22.74■■□□□ 1.23
CLDND1-220ENST00000508902 KCNJ4P48050 445 aa22.74■■□□□ 1.23
CLDND1-220ENST00000508902 FMR1Q06787 632 aaKnown RBP eCLIP22.74■■□□□ 1.23
CLDND1-220ENST00000508902 MAP1SQ66K74 1059 aaPredicted RBP22.74■■□□□ 1.23
CLDND1-220ENST00000508902 C1orf115Q9H7X2 142 aa22.74■■□□□ 1.23
CLDND1-220ENST00000508902 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.74■■□□□ 1.23
CLDND1-220ENST00000508902 MROH5Q6ZUA9 1318 aa22.74■■□□□ 1.23
CLDND1-220ENST00000508902 PNMA6EA0A0J9YXQ4 647 aa22.73■■□□□ 1.23
CLDND1-220ENST00000508902 USP17L3A6NCW0 530 aa22.73■■□□□ 1.23
CLDND1-220ENST00000508902 USP17L4A6NCW7 530 aa22.73■■□□□ 1.23
CLDND1-220ENST00000508902 ZBTB7BO15156 539 aaPredicted RBP22.73■■□□□ 1.23
CLDND1-220ENST00000508902 FGFR2P21802 821 aa22.73■■□□□ 1.23
CLDND1-220ENST00000508902 USP17L1Q7RTZ2 530 aa22.73■■□□□ 1.23
CLDND1-220ENST00000508902 SAMD7Q7Z3H4 446 aa22.73■■□□□ 1.23
CLDND1-220ENST00000508902 YTHDC1Q96MU7 727 aaKnown RBP22.73■■□□□ 1.23
CLDND1-220ENST00000508902 SIL1Q9H173 461 aa22.73■■□□□ 1.23
CLDND1-220ENST00000508902 G3V3G9 751 aa22.72■■□□□ 1.23
CLDND1-220ENST00000508902 RPS12P25398 132 aaKnown RBP22.72■■□□□ 1.23
CLDND1-220ENST00000508902 GYG1P46976 350 aa22.72■■□□□ 1.23
CLDND1-220ENST00000508902 UBE4AQ14139 1066 aa22.72■■□□□ 1.23
CLDND1-220ENST00000508902 METTL24Q5JXM2 366 aa22.72■■□□□ 1.23
CLDND1-220ENST00000508902 DCAF8Q5TAQ9 597 aa22.72■■□□□ 1.23
CLDND1-220ENST00000508902 C20orf194Q5TEA3 1177 aa22.72■■□□□ 1.23
CLDND1-220ENST00000508902 USP50Q70EL3 339 aaPredicted RBP22.72■■□□□ 1.23
CLDND1-220ENST00000508902 PNMA8AQ86V59 439 aaPredicted RBP22.72■■□□□ 1.23
CLDND1-220ENST00000508902 CERS5Q8N5B7 392 aa22.72■■□□□ 1.23
CLDND1-220ENST00000508902 FAM84BQ96KN1 310 aaPredicted RBP22.72■■□□□ 1.23
CLDND1-220ENST00000508902 COPRSQ9NQ92 184 aa22.72■■□□□ 1.23
CLDND1-220ENST00000508902 PDE8BO95263 885 aa22.71■■□□□ 1.23
CLDND1-220ENST00000508902 GNAI2P04899 355 aa22.71■■□□□ 1.23
CLDND1-220ENST00000508902 IL1R1P14778 569 aa22.71■■□□□ 1.23
CLDND1-220ENST00000508902 ITPRIPQ8IWB1 547 aa22.71■■□□□ 1.23
CLDND1-220ENST00000508902 FTSJ3Q8IY81 847 aaKnown RBP22.71■■□□□ 1.23
CLDND1-220ENST00000508902 ASTN2O75129 1339 aaPredicted RBP22.71■■□□□ 1.23
CLDND1-220ENST00000508902 ZNF280AP59817 542 aaPredicted RBP22.7■■□□□ 1.22
CLDND1-220ENST00000508902 TBC1D10BQ4KMP7 808 aaPredicted RBP22.7■■□□□ 1.22
CLDND1-220ENST00000508902 JAG2Q9Y219 1238 aa22.7■■□□□ 1.22
CLDND1-220ENST00000508902 CLEC11AQ9Y240 323 aa22.7■■□□□ 1.22
CLDND1-220ENST00000508902 TRPM7Q96QT4 1865 aa22.69■■□□□ 1.22
CLDND1-220ENST00000508902 COL1A1P02452 1464 aaPredicted RBP22.69■■□□□ 1.22
CLDND1-220ENST00000508902 SRGAP3O43295 1099 aa22.69■■□□□ 1.22
CLDND1-220ENST00000508902 CIAO1O76071 339 aa22.69■■□□□ 1.22
CLDND1-220ENST00000508902 GTF2IP78347 998 aa22.69■■□□□ 1.22
CLDND1-220ENST00000508902 STRIP1Q5VSL9 837 aa22.69■■□□□ 1.22
CLDND1-220ENST00000508902 PGAP2Q9UHJ9 254 aa22.69■■□□□ 1.22
CLDND1-220ENST00000508902 MYH13Q9UKX3 1938 aa22.69■■□□□ 1.22
CLDND1-220ENST00000508902 DLK2Q6UY11 383 aa22.68■■□□□ 1.22
CLDND1-220ENST00000508902 FBXO33Q7Z6M2 555 aa22.68■■□□□ 1.22
CLDND1-220ENST00000508902 CNTROBQ8N137 903 aa22.68■■□□□ 1.22
CLDND1-220ENST00000508902 AGBL3Q8NEM8 1001 aa22.68■■□□□ 1.22
CLDND1-220ENST00000508902 PCNTO95613 3336 aa22.67■■□□□ 1.22
CLDND1-220ENST00000508902 TRAF5O00463 557 aa22.67■■□□□ 1.22
CLDND1-220ENST00000508902 APLP1P51693 650 aa22.67■■□□□ 1.22
CLDND1-220ENST00000508902 POLA2Q14181 598 aa22.67■■□□□ 1.22
CLDND1-220ENST00000508902 DNAJC5GQ8N7S2 189 aa22.67■■□□□ 1.22
CLDND1-220ENST00000508902 TDRD7Q8NHU6 1098 aaKnown RBP22.67■■□□□ 1.22
CLDND1-220ENST00000508902 FBXW7Q969H0 707 aa22.67■■□□□ 1.22
CLDND1-220ENST00000508902 TTLL5Q6EMB2 1281 aa22.66■■□□□ 1.22
CLDND1-220ENST00000508902 ZNF804AQ7Z570 1209 aa22.66■■□□□ 1.22
CLDND1-220ENST00000508902 H7C1D1 291 aa22.65■■□□□ 1.22
CLDND1-220ENST00000508902 PUM3Q15397 648 aaKnown RBP22.65■■□□□ 1.22
CLDND1-220ENST00000508902 KIF4BQ2VIQ3 1234 aa22.65■■□□□ 1.22
CLDND1-220ENST00000508902 RBM26Q5T8P6 1007 aaKnown RBP22.65■■□□□ 1.22
CLDND1-220ENST00000508902 FBXO3Q9UK99 471 aa22.65■■□□□ 1.22
CLDND1-220ENST00000508902 IQSEC3Q9UPP2 1182 aaPredicted RBP22.65■■□□□ 1.22
CLDND1-220ENST00000508902 HDAC5Q9UQL6 1122 aa22.65■■□□□ 1.22
CLDND1-220ENST00000508902 COG6Q9Y2V7 657 aa22.65■■□□□ 1.22
CLDND1-220ENST00000508902 FAM205AQ6ZU69 1335 aa22.64■■□□□ 1.22
CLDND1-220ENST00000508902 HIBADHP31937 336 aaKnown RBP22.64■■□□□ 1.21
CLDND1-220ENST00000508902 BCAMP50895 628 aa22.64■■□□□ 1.21
CLDND1-220ENST00000508902 MVPQ14764 893 aaKnown RBP22.64■■□□□ 1.21
CLDND1-220ENST00000508902 GRIK5Q16478 980 aa22.64■■□□□ 1.21
CLDND1-220ENST00000508902 GLIS2Q9BZE0 524 aaPredicted RBP22.64■■□□□ 1.21
CLDND1-220ENST00000508902 PCDHAC2Q9Y5I4 1007 aa22.64■■□□□ 1.21
CLDND1-220ENST00000508902 AOX1Q06278 1338 aa22.63■■□□□ 1.21
CLDND1-220ENST00000508902 USP17L8P0C7I0 530 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms