RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
NEDD9-212ENST00000508800 XDHP47989 1333 aa14.74□□□□□ -0.05
NEDD9-212ENST00000508800 IGF2BP3O00425 579 aaKnown RBP eCLIP14.74□□□□□ -0.05
NEDD9-212ENST00000508800 AIMP1Q12904 312 aaKnown RBP14.74□□□□□ -0.05
NEDD9-212ENST00000508800 CRHR2Q13324 411 aa14.74□□□□□ -0.05
NEDD9-212ENST00000508800 FAM89AQ96GI7 184 aa14.74□□□□□ -0.05
NEDD9-212ENST00000508800 TSPYL4Q9UJ04 414 aa14.74□□□□□ -0.05
NEDD9-212ENST00000508800 ANGEL1Q9UNK9 670 aaKnown RBP14.74□□□□□ -0.05
NEDD9-212ENST00000508800 COL4A1P02462 1669 aa14.74□□□□□ -0.05
NEDD9-212ENST00000508800 A0A1W2PPC1 479 aa14.73□□□□□ -0.05
NEDD9-212ENST00000508800 PPP1R12BO60237 982 aaPredicted RBP14.73□□□□□ -0.05
NEDD9-212ENST00000508800 WNK4Q96J92 1243 aa14.73□□□□□ -0.05
NEDD9-212ENST00000508800 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
NEDD9-212ENST00000508800 SCAF8Q9UPN6 1271 aaKnown RBP14.73□□□□□ -0.05
NEDD9-212ENST00000508800 ZNF646O15015 1829 aaPredicted RBP14.73□□□□□ -0.05
NEDD9-212ENST00000508800 ANXA1P04083 346 aa14.72□□□□□ -0.05
NEDD9-212ENST00000508800 NFE2L2Q16236 605 aa14.72□□□□□ -0.05
NEDD9-212ENST00000508800 PLBD2Q8NHP8 589 aa14.72□□□□□ -0.05
NEDD9-212ENST00000508800 ISCA1Q9BUE6 129 aa14.72□□□□□ -0.05
NEDD9-212ENST00000508800 UNC80Q8N2C7 3258 aa14.72□□□□□ -0.05
NEDD9-212ENST00000508800 ECM29Q5VYK3 1845 aa14.71□□□□□ -0.05
NEDD9-212ENST00000508800 IRS4O14654 1257 aaPredicted RBP14.71□□□□□ -0.05
NEDD9-212ENST00000508800 ATP2B4P23634 1241 aa14.71□□□□□ -0.05
NEDD9-212ENST00000508800 TRIM28Q13263 835 aaKnown RBP14.71□□□□□ -0.05
NEDD9-212ENST00000508800 PRKG1Q13976 671 aa14.71□□□□□ -0.05
NEDD9-212ENST00000508800 CNGB1Q14028 1251 aaPredicted RBP14.71□□□□□ -0.05
NEDD9-212ENST00000508800 STRIP1Q5VSL9 837 aa14.71□□□□□ -0.05
NEDD9-212ENST00000508800 PPP2R3BQ9Y5P8 575 aa14.71□□□□□ -0.05
NEDD9-212ENST00000508800 MED23Q9ULK4 1368 aa14.71□□□□□ -0.06
NEDD9-212ENST00000508800 DACT2Q5SW24 774 aa14.7□□□□□ -0.06
NEDD9-212ENST00000508800 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
NEDD9-212ENST00000508800 CCDC152Q4G0S7 254 aa14.69□□□□□ -0.06
NEDD9-212ENST00000508800 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
NEDD9-212ENST00000508800 HTATIP2Q9BUP3 242 aa14.69□□□□□ -0.06
NEDD9-212ENST00000508800 PTCH2Q9Y6C5 1203 aa14.69□□□□□ -0.06
NEDD9-212ENST00000508800 TESPA1A2RU30 521 aaPredicted RBP14.68□□□□□ -0.06
NEDD9-212ENST00000508800 SASH1O94885 1247 aa14.68□□□□□ -0.06
NEDD9-212ENST00000508800 GNRH1P01148 92 aa14.68□□□□□ -0.06
NEDD9-212ENST00000508800 PPP2R1AP30153 589 aa14.68□□□□□ -0.06
NEDD9-212ENST00000508800 SUPT20HL1Q3ZLR7 823 aa14.68□□□□□ -0.06
NEDD9-212ENST00000508800 NKX2-3Q8TAU0 364 aa14.68□□□□□ -0.06
NEDD9-212ENST00000508800 DPF3Q92784 378 aa14.68□□□□□ -0.06
NEDD9-212ENST00000508800 DEFB129Q9H1M3 183 aa14.68□□□□□ -0.06
NEDD9-212ENST00000508800 PRO3102Q9H379 93 aa14.68□□□□□ -0.06
NEDD9-212ENST00000508800 NR2E3Q9Y5X4 410 aa14.68□□□□□ -0.06
NEDD9-212ENST00000508800 MAPK8IP3Q9UPT6 1336 aa14.67□□□□□ -0.06
NEDD9-212ENST00000508800 WDHD1O75717 1129 aaPredicted RBP14.67□□□□□ -0.06
NEDD9-212ENST00000508800 IREB2P48200 963 aaKnown RBP14.67□□□□□ -0.06
NEDD9-212ENST00000508800 ANKRD18AQ8IVF6 992 aa14.67□□□□□ -0.06
NEDD9-212ENST00000508800 ZBED3Q96IU2 234 aaPredicted RBP14.67□□□□□ -0.06
NEDD9-212ENST00000508800 CLMNQ96JQ2 1002 aa14.67□□□□□ -0.06
NEDD9-212ENST00000508800 SEC31BQ9NQW1 1179 aa14.67□□□□□ -0.06
NEDD9-212ENST00000508800 PRMT2P55345 433 aa14.66□□□□□ -0.06
NEDD9-212ENST00000508800 ANKRD13AQ8IZ07 590 aa14.66□□□□□ -0.06
NEDD9-212ENST00000508800 ZBTB38Q8NAP3 1195 aaPredicted RBP14.66□□□□□ -0.06
NEDD9-212ENST00000508800 PLEKHF1Q96S99 279 aa14.66□□□□□ -0.06
NEDD9-212ENST00000508800 COA1Q9GZY4 146 aa14.66□□□□□ -0.06
NEDD9-212ENST00000508800 ZFYVE28Q9HCC9 887 aa14.66□□□□□ -0.06
NEDD9-212ENST00000508800 SSC5DA1L4H1 1573 aa14.65□□□□□ -0.06
NEDD9-212ENST00000508800 ATP5J2-PTCD1G3V325 749 aa14.65□□□□□ -0.06
NEDD9-212ENST00000508800 KIF22Q14807 665 aa14.65□□□□□ -0.06
NEDD9-212ENST00000508800 RTL5Q5HYW3 569 aaPredicted RBP14.65□□□□□ -0.06
NEDD9-212ENST00000508800 ZNF804BA4D1E1 1349 aa14.65□□□□□ -0.06
NEDD9-212ENST00000508800 HOXB7P09629 217 aa14.64□□□□□ -0.07
NEDD9-212ENST00000508800 TAF1CQ15572 869 aaPredicted RBP14.64□□□□□ -0.07
NEDD9-212ENST00000508800 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
NEDD9-212ENST00000508800 FBXW7Q969H0 707 aa14.64□□□□□ -0.07
NEDD9-212ENST00000508800 CDC5LQ99459 802 aaKnown RBP14.64□□□□□ -0.07
NEDD9-212ENST00000508800 PTPN18Q99952 460 aa14.64□□□□□ -0.07
NEDD9-212ENST00000508800 CHPF2Q9P2E5 772 aa14.64□□□□□ -0.07
NEDD9-212ENST00000508800 DBF4Q9UBU7 674 aaPredicted RBP14.64□□□□□ -0.07
NEDD9-212ENST00000508800 OTOFQ9HC10 1997 aa14.64□□□□□ -0.07
NEDD9-212ENST00000508800 MYH3P11055 1940 aa14.63□□□□□ -0.07
NEDD9-212ENST00000508800 MYO1BO43795 1136 aa14.63□□□□□ -0.07
NEDD9-212ENST00000508800 PDE8AO60658 829 aa14.63□□□□□ -0.07
NEDD9-212ENST00000508800 CAP1Q01518 475 aa14.63□□□□□ -0.07
NEDD9-212ENST00000508800 LMOD3Q0VAK6 560 aa14.63□□□□□ -0.07
NEDD9-212ENST00000508800 DLGAP5Q15398 846 aa14.63□□□□□ -0.07
NEDD9-212ENST00000508800 MTMR14Q8NCE2 650 aa14.63□□□□□ -0.07
NEDD9-212ENST00000508800 ZNF428Q96B54 188 aa14.63□□□□□ -0.07
NEDD9-212ENST00000508800 HYPKQ9NX55 129 aa14.63□□□□□ -0.07
NEDD9-212ENST00000508800 TTLL5Q6EMB2 1281 aa14.62□□□□□ -0.07
NEDD9-212ENST00000508800 KIAA0825Q8IV33 1275 aa14.62□□□□□ -0.07
NEDD9-212ENST00000508800 MXD3Q9BW11 206 aa14.62□□□□□ -0.07
NEDD9-212ENST00000508800 ZCCHC17Q9NP64 241 aaKnown RBP14.62□□□□□ -0.07
NEDD9-212ENST00000508800 FZD1Q9UP38 647 aa14.62□□□□□ -0.07
NEDD9-212ENST00000508800 TTC28Q96AY4 2481 aa14.61□□□□□ -0.07
NEDD9-212ENST00000508800 PCCAP05165 728 aaPredicted RBP14.61□□□□□ -0.07
NEDD9-212ENST00000508800 CAPN2P17655 700 aa14.61□□□□□ -0.07
NEDD9-212ENST00000508800 GJA5P36382 358 aa14.61□□□□□ -0.07
NEDD9-212ENST00000508800 CCT4P50991 539 aaKnown RBP14.61□□□□□ -0.07
NEDD9-212ENST00000508800 GTF2A2P52657 109 aa14.61□□□□□ -0.07
NEDD9-212ENST00000508800 HDGFL1Q5TGJ6 251 aa14.61□□□□□ -0.07
NEDD9-212ENST00000508800 UBE2Q1Q7Z7E8 422 aa14.61□□□□□ -0.07
NEDD9-212ENST00000508800 SH3TC2Q8TF17 1288 aa14.61□□□□□ -0.07
NEDD9-212ENST00000508800 SHISA4Q96DD7 197 aa14.61□□□□□ -0.07
NEDD9-212ENST00000508800 MS4A4AQ96JQ5 239 aa14.61□□□□□ -0.07
NEDD9-212ENST00000508800 BSDC1Q9NW68 430 aaPredicted RBP14.61□□□□□ -0.07
NEDD9-212ENST00000508800 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.61□□□□□ -0.07
NEDD9-212ENST00000508800 SPEF2Q9C093 1822 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms