RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 FMR1Q06787 632 aaKnown RBP eCLIP12.7□□□□□ -0.38
CHD1-205ENST00000508756 WFDC8Q8IUA0 241 aa12.7□□□□□ -0.38
CHD1-205ENST00000508756 CCDC74AQ96AQ1 378 aa12.7□□□□□ -0.38
CHD1-205ENST00000508756 POP1Q99575 1024 aaKnown RBP12.7□□□□□ -0.38
CHD1-205ENST00000508756 NPHS2Q9NP85 383 aa12.7□□□□□ -0.38
CHD1-205ENST00000508756 ANKRD33BA6NCL7 494 aa12.69□□□□□ -0.38
CHD1-205ENST00000508756 MAPK8P45983 427 aa12.69□□□□□ -0.38
CHD1-205ENST00000508756 TRAPPC3LQ5T215 181 aa12.69□□□□□ -0.38
CHD1-205ENST00000508756 DNAJC14Q6Y2X3 702 aaPredicted RBP12.69□□□□□ -0.38
CHD1-205ENST00000508756 NOP53Q9NZM5 478 aaKnown RBP12.69□□□□□ -0.38
CHD1-205ENST00000508756 A0A1W2PP55 124 aa12.68□□□□□ -0.38
CHD1-205ENST00000508756 FAM229AH3BQW9 127 aa12.68□□□□□ -0.38
CHD1-205ENST00000508756 PDE2AO00408 941 aaPredicted RBP12.68□□□□□ -0.38
CHD1-205ENST00000508756 KCNMA1Q12791 1236 aa12.68□□□□□ -0.38
CHD1-205ENST00000508756 ENOX2Q16206 610 aaKnown RBP12.68□□□□□ -0.38
CHD1-205ENST00000508756 IL22RA1Q8N6P7 574 aa12.68□□□□□ -0.38
CHD1-205ENST00000508756 P4HBP07237 508 aaKnown RBP12.67□□□□□ -0.38
CHD1-205ENST00000508756 ILDR2Q71H61 639 aa12.67□□□□□ -0.38
CHD1-205ENST00000508756 SETDB2Q96T68 719 aa12.67□□□□□ -0.38
CHD1-205ENST00000508756 RASSF7Q02833 373 aa12.66□□□□□ -0.38
CHD1-205ENST00000508756 TMEM102Q8N9M5 508 aaPredicted RBP12.66□□□□□ -0.38
CHD1-205ENST00000508756 EPS8L3Q8TE67 593 aaKnown RBP12.66□□□□□ -0.38
CHD1-205ENST00000508756 NXPE3Q969Y0 559 aa12.66□□□□□ -0.38
CHD1-205ENST00000508756 PTPRAP18433 802 aa12.65□□□□□ -0.38
CHD1-205ENST00000508756 PI16Q6UXB8 463 aa12.65□□□□□ -0.38
CHD1-205ENST00000508756 SH2B1Q9NRF2 756 aaPredicted RBP12.65□□□□□ -0.38
CHD1-205ENST00000508756 A0A0A0MRY4 1105 aa12.64□□□□□ -0.39
CHD1-205ENST00000508756 SPDYE3A6NKU9 549 aa12.64□□□□□ -0.39
CHD1-205ENST00000508756 TMCO4Q5TGY1 634 aa12.64□□□□□ -0.39
CHD1-205ENST00000508756 WWC3Q9ULE0 1092 aa12.64□□□□□ -0.39
CHD1-205ENST00000508756 METTL12A8MUP2 240 aa12.63□□□□□ -0.39
CHD1-205ENST00000508756 CDC27P30260 824 aa12.63□□□□□ -0.39
CHD1-205ENST00000508756 CDC25BP30305 580 aa12.63□□□□□ -0.39
CHD1-205ENST00000508756 BHLHE41Q9C0J9 482 aaPredicted RBP12.63□□□□□ -0.39
CHD1-205ENST00000508756 EPHA1P21709 976 aa12.62□□□□□ -0.39
CHD1-205ENST00000508756 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
CHD1-205ENST00000508756 KIAA0319Q5VV43 1072 aa12.62□□□□□ -0.39
CHD1-205ENST00000508756 TXNDC11Q6PKC3 985 aa12.62□□□□□ -0.39
CHD1-205ENST00000508756 NPAS4Q8IUM7 802 aa12.62□□□□□ -0.39
CHD1-205ENST00000508756 ASAP3Q8TDY4 903 aa12.62□□□□□ -0.39
CHD1-205ENST00000508756 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
CHD1-205ENST00000508756 TCF12Q99081 682 aa12.62□□□□□ -0.39
CHD1-205ENST00000508756 ADAM19Q9H013 955 aa12.62□□□□□ -0.39
CHD1-205ENST00000508756 LIN7BQ9HAP6 207 aa12.62□□□□□ -0.39
CHD1-205ENST00000508756 GADD45BO75293 160 aaPredicted RBP12.61□□□□□ -0.39
CHD1-205ENST00000508756 PRRT3Q5FWE3 981 aa12.61□□□□□ -0.39
CHD1-205ENST00000508756 CACTIN-AS1Q8N1I8 211 aa12.61□□□□□ -0.39
CHD1-205ENST00000508756 EHD4Q9H223 541 aa12.61□□□□□ -0.39
CHD1-205ENST00000508756 PPME1Q9Y570 386 aa12.61□□□□□ -0.39
CHD1-205ENST00000508756 LINC01387J3KSC0 135 aa12.6□□□□□ -0.39
CHD1-205ENST00000508756 RAC1P63000 192 aa12.6□□□□□ -0.39
CHD1-205ENST00000508756 CCNJLQ8IV13 435 aa12.6□□□□□ -0.39
CHD1-205ENST00000508756 FMR1NBQ8N0W7 255 aaPredicted RBP12.6□□□□□ -0.39
CHD1-205ENST00000508756 DEAF1O75398 565 aaPredicted RBP12.59□□□□□ -0.39
CHD1-205ENST00000508756 GDF11O95390 407 aa12.59□□□□□ -0.39
CHD1-205ENST00000508756 SPATA31C1P0DKV0 1188 aa12.59□□□□□ -0.39
CHD1-205ENST00000508756 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHD1-205ENST00000508756 SOX13Q9UN79 622 aa12.59□□□□□ -0.39
CHD1-205ENST00000508756 KRBA1A5PL33 1030 aa12.58□□□□□ -0.4
CHD1-205ENST00000508756 LDHBP07195 334 aaKnown RBP12.58□□□□□ -0.4
CHD1-205ENST00000508756 GRIA4P48058 902 aa12.58□□□□□ -0.4
CHD1-205ENST00000508756 GRM2Q14416 872 aa12.58□□□□□ -0.4
CHD1-205ENST00000508756 DTWD1Q8N5C7 304 aa12.58□□□□□ -0.4
CHD1-205ENST00000508756 BSNDQ8WZ55 320 aa12.58□□□□□ -0.4
CHD1-205ENST00000508756 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
CHD1-205ENST00000508756 FAM177BA6PVY3 158 aa12.57□□□□□ -0.4
CHD1-205ENST00000508756 ATP2B2Q01814 1243 aa12.57□□□□□ -0.4
CHD1-205ENST00000508756 SETDB1Q15047 1291 aa12.57□□□□□ -0.4
CHD1-205ENST00000508756 GRIK4Q16099 956 aa12.57□□□□□ -0.4
CHD1-205ENST00000508756 SPRED3Q2MJR0 410 aa12.57□□□□□ -0.4
CHD1-205ENST00000508756 TMEM151AQ8N4L1 468 aa12.57□□□□□ -0.4
CHD1-205ENST00000508756 MUC3BQ9H195 1237 aa12.57□□□□□ -0.4
CHD1-205ENST00000508756 ALYREFQ86V81 257 aaKnown RBP12.56□□□□□ -0.4
CHD1-205ENST00000508756 FBXO11Q86XK2 927 aa12.56□□□□□ -0.4
CHD1-205ENST00000508756 ELNP15502 786 aa12.55□□□□□ -0.4
CHD1-205ENST00000508756 COL19A1Q14993 1142 aa12.55□□□□□ -0.4
CHD1-205ENST00000508756 EAPPQ56P03 285 aaPredicted RBP12.55□□□□□ -0.4
CHD1-205ENST00000508756 ALG1LQ6GMV1 187 aa12.55□□□□□ -0.4
CHD1-205ENST00000508756 VN1R5Q7Z5H4 357 aa12.55□□□□□ -0.4
CHD1-205ENST00000508756 GLIS3Q8NEA6 775 aa12.55□□□□□ -0.4
CHD1-205ENST00000508756 FBF1Q8TES7 1133 aa12.55□□□□□ -0.4
CHD1-205ENST00000508756 CARD10Q9BWT7 1032 aa12.55□□□□□ -0.4
CHD1-205ENST00000508756 ABCB6Q9NP58 842 aa12.55□□□□□ -0.4
CHD1-205ENST00000508756 A0A096LPE4 126 aa12.54□□□□□ -0.4
CHD1-205ENST00000508756 A0A1W2PPZ6 126 aa12.54□□□□□ -0.4
CHD1-205ENST00000508756 H3BRJ5 948 aa12.54□□□□□ -0.4
CHD1-205ENST00000508756 MFAP1P55081 439 aaKnown RBP12.54□□□□□ -0.4
CHD1-205ENST00000508756 CABP4P57796 275 aa12.54□□□□□ -0.4
CHD1-205ENST00000508756 PRPF40BQ6NWY9 871 aaKnown RBP12.53□□□□□ -0.4
CHD1-205ENST00000508756 SHISA2Q6UWI4 295 aa12.53□□□□□ -0.4
CHD1-205ENST00000508756 GALNT11Q8NCW6 608 aa12.53□□□□□ -0.4
CHD1-205ENST00000508756 BCO2Q9BYV7 579 aa12.53□□□□□ -0.4
CHD1-205ENST00000508756 FSCN2O14926 492 aa12.52□□□□□ -0.41
CHD1-205ENST00000508756 HGSNATQ68CP4 663 aa12.52□□□□□ -0.41
CHD1-205ENST00000508756 FAM117BQ6P1L5 589 aa12.52□□□□□ -0.41
CHD1-205ENST00000508756 TRAK1Q9UPV9 953 aa12.52□□□□□ -0.41
CHD1-205ENST00000508756 NXPE4Q6UWF7 544 aa12.51□□□□□ -0.41
CHD1-205ENST00000508756 FBXO33Q7Z6M2 555 aa12.51□□□□□ -0.41
CHD1-205ENST00000508756 SLC7A3Q8WY07 619 aa12.51□□□□□ -0.41
CHD1-205ENST00000508756 SRA1Q9HD15 236 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms