RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 FAM177BA6PVY3 158 aa9.61□□□□□ -0.87
NR1I3-226ENST00000508740 K7ELQ4 463 aaPredicted RBP9.61□□□□□ -0.87
NR1I3-226ENST00000508740 HCLS1P14317 486 aaPredicted RBP9.61□□□□□ -0.87
NR1I3-226ENST00000508740 HSPA4P34932 840 aa9.61□□□□□ -0.87
NR1I3-226ENST00000508740 METTL24Q5JXM2 366 aa9.61□□□□□ -0.87
NR1I3-226ENST00000508740 LDHAL6AQ6ZMR3 332 aa9.61□□□□□ -0.87
NR1I3-226ENST00000508740 TICAM2Q86XR7 235 aa9.61□□□□□ -0.87
NR1I3-226ENST00000508740 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.61□□□□□ -0.87
NR1I3-226ENST00000508740 FSD1Q9BTV5 496 aa9.61□□□□□ -0.87
NR1I3-226ENST00000508740 PDGFDQ9GZP0 370 aaPredicted RBP9.61□□□□□ -0.87
NR1I3-226ENST00000508740 SLKQ9H2G2 1235 aaPredicted RBP9.61□□□□□ -0.87
NR1I3-226ENST00000508740 SNRKQ9NRH2 765 aa9.61□□□□□ -0.87
NR1I3-226ENST00000508740 CNNM1Q9NRU3 951 aa9.61□□□□□ -0.87
NR1I3-226ENST00000508740 NARFQ9UHQ1 456 aa9.61□□□□□ -0.87
NR1I3-226ENST00000508740 PALD1Q9ULE6 856 aa9.61□□□□□ -0.87
NR1I3-226ENST00000508740 RAD50Q92878 1312 aa9.6□□□□□ -0.87
NR1I3-226ENST00000508740 ZNF609O15014 1411 aa9.6□□□□□ -0.87
NR1I3-226ENST00000508740 ST18O60284 1047 aa9.6□□□□□ -0.87
NR1I3-226ENST00000508740 MKRN3Q13064 507 aaKnown RBP9.6□□□□□ -0.87
NR1I3-226ENST00000508740 NMIQ13287 307 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-226ENST00000508740 NBR1Q14596 966 aa9.6□□□□□ -0.87
NR1I3-226ENST00000508740 CCDC152Q4G0S7 254 aa9.6□□□□□ -0.87
NR1I3-226ENST00000508740 IL27Q8NEV9 243 aa9.6□□□□□ -0.87
NR1I3-226ENST00000508740 EDC3Q96F86 508 aaKnown RBP9.6□□□□□ -0.87
NR1I3-226ENST00000508740 XAGE2Q96GT9 111 aa9.6□□□□□ -0.87
NR1I3-226ENST00000508740 FAM227BQ96M60 508 aa9.6□□□□□ -0.87
NR1I3-226ENST00000508740 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
NR1I3-226ENST00000508740 RTCBQ9Y3I0 505 aaKnown RBP9.6□□□□□ -0.87
NR1I3-226ENST00000508740 ZNF831Q5JPB2 1677 aa9.6□□□□□ -0.87
NR1I3-226ENST00000508740 GOLGB1Q14789 3259 aaKnown RBP9.6□□□□□ -0.87
NR1I3-226ENST00000508740 MYH14Q7Z406 1995 aaKnown RBP9.59□□□□□ -0.87
NR1I3-226ENST00000508740 GNPATO15228 680 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 ZPR1O75312 459 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 IFIT1P09914 478 aaKnown RBP9.59□□□□□ -0.87
NR1I3-226ENST00000508740 ADORA1P30542 326 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 PTH1RQ03431 593 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 CCDC158Q5M9N0 1113 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 USPL1Q5W0Q7 1092 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 KBTBD3Q8NAB2 608 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 KCNB2Q92953 911 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 DNAJC2Q99543 621 aaKnown RBP9.59□□□□□ -0.87
NR1I3-226ENST00000508740 NDUFB9Q9Y6M9 179 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 RFX7Q2KHR2 1363 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 RTL9Q8NET4 1388 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 COL24A1Q17RW2 1714 aa9.59□□□□□ -0.87
NR1I3-226ENST00000508740 A0A0D9SFI3 127 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 GOLIM4O00461 696 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 PDE8BO95263 885 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 DDIT3P35638 169 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 MCM2P49736 904 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 NEK4P51957 841 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 ATN1P54259 1190 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-226ENST00000508740 NFKBIBQ15653 356 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 ATP2B3Q16720 1220 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 ERFEQ4G0M1 354 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 SLC10A5Q5PT55 438 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 TTC39AQ5SRH9 613 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 GORABQ5T7V8 394 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 TBC1D9BQ66K14 1250 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 SMIM5Q71RC9 77 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 DDX46Q7L014 1031 aaKnown RBP9.58□□□□□ -0.88
NR1I3-226ENST00000508740 VGLL2Q8N8G2 317 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 ARHGEF1Q92888 912 aaKnown RBP9.58□□□□□ -0.88
NR1I3-226ENST00000508740 MAP4K1Q92918 833 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 PAG1Q9NWQ8 432 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 CHMP5Q9NZZ3 219 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 SRP68Q9UHB9 627 aaKnown RBP9.58□□□□□ -0.88
NR1I3-226ENST00000508740 NUP98P52948 1817 aa9.58□□□□□ -0.88
NR1I3-226ENST00000508740 CCDC171Q6TFL3 1326 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 MROH5Q6ZUA9 1318 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 RIC1Q4ADV7 1423 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 COL5A3P25940 1745 aaPredicted RBP9.57□□□□□ -0.88
NR1I3-226ENST00000508740 GABBR2O75899 941 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 IGHMBP2P38935 993 aaKnown RBP9.57□□□□□ -0.88
NR1I3-226ENST00000508740 SF3B3Q15393 1217 aaKnown RBP9.57□□□□□ -0.88
NR1I3-226ENST00000508740 MCMDC2Q4G0Z9 681 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 BICDL1Q6ZP65 573 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 SETDB2Q96T68 719 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 MPHOSPH8Q99549 860 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 NYXQ9GZU5 481 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 SEC31BQ9NQW1 1179 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 SNX14Q9Y5W7 946 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 ANKRD36CQ5JPF3 1778 aa9.57□□□□□ -0.88
NR1I3-226ENST00000508740 BTAF1O14981 1849 aa9.56□□□□□ -0.88
NR1I3-226ENST00000508740 MED23Q9ULK4 1368 aa9.56□□□□□ -0.88
NR1I3-226ENST00000508740 TAF5LO75529 589 aa9.56□□□□□ -0.88
NR1I3-226ENST00000508740 HSP90AA1P07900 732 aaKnown RBP9.56□□□□□ -0.88
NR1I3-226ENST00000508740 FGFR2P21802 821 aa9.56□□□□□ -0.88
NR1I3-226ENST00000508740 RFC4P35249 363 aa9.56□□□□□ -0.88
NR1I3-226ENST00000508740 FKBP4Q02790 459 aaKnown RBP eCLIP9.56□□□□□ -0.88
NR1I3-226ENST00000508740 NECTIN1Q15223 517 aa9.56□□□□□ -0.88
NR1I3-226ENST00000508740 PUM3Q15397 648 aaKnown RBP9.56□□□□□ -0.88
NR1I3-226ENST00000508740 PRPF40BQ6NWY9 871 aaKnown RBP9.56□□□□□ -0.88
NR1I3-226ENST00000508740 AMIGO3Q86WK7 504 aa9.56□□□□□ -0.88
NR1I3-226ENST00000508740 LPIN2Q92539 896 aa9.56□□□□□ -0.88
NR1I3-226ENST00000508740 ZNF512BQ96KM6 892 aaPredicted RBP9.56□□□□□ -0.88
NR1I3-226ENST00000508740 HELLSQ9NRZ9 838 aa9.56□□□□□ -0.88
NR1I3-226ENST00000508740 LRRC4BQ9NT99 713 aa9.56□□□□□ -0.88
NR1I3-226ENST00000508740 RBM8AQ9Y5S9 174 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms