RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 IFIT1P09914 478 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 PDIA4P13667 645 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 TSGA10IPQ3SY00 556 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 EDC3Q96F86 508 aaKnown RBP13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 PPP1R9BQ96SB3 815 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
PRPF40B-203ENST00000508736 TAF5LO75529 589 aa13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 ZSCAN22P10073 491 aaPredicted RBP13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 CLCN1P35523 988 aa13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 LRRFIP1Q32MZ4 808 aaKnown RBP13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 CREB3L3Q68CJ9 461 aa13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 LRSAM1Q6UWE0 723 aa13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 VGLL2Q8N8G2 317 aa13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 XAGE2Q96GT9 111 aa13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 CAMKK2Q96RR4 588 aa13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 TNS1Q9HBL0 1735 aaKnown RBP13.77□□□□□ -0.21
PRPF40B-203ENST00000508736 STX6O43752 255 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 NTSR2O95665 410 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 ANKRD1Q15327 319 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 CSPP1Q1MSJ5 1256 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 DDX46Q7L014 1031 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 TMEM87AQ8NBN3 555 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 MROH5Q6ZUA9 1318 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 ESPNB1AK53 854 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 ATP2B3Q16720 1220 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 METTL24Q5JXM2 366 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 ZNF589Q86UQ0 364 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 CCDC85AQ96PX6 553 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 CNNM1Q9NRU3 951 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 TMEM63CQ9P1W3 806 aa13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 RBM27Q9P2N5 1060 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 NIP7Q9Y221 180 aaKnown RBP eCLIP13.76□□□□□ -0.21
PRPF40B-203ENST00000508736 SCN7AQ01118 1682 aa13.75□□□□□ -0.21
PRPF40B-203ENST00000508736 DDX60Q8IY21 1712 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-203ENST00000508736 GOLIM4O00461 696 aa13.75□□□□□ -0.21
PRPF40B-203ENST00000508736 SLC27A2O14975 620 aa13.75□□□□□ -0.21
PRPF40B-203ENST00000508736 PDE8BO95263 885 aa13.75□□□□□ -0.21
PRPF40B-203ENST00000508736 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
PRPF40B-203ENST00000508736 GORABQ5T7V8 394 aa13.75□□□□□ -0.21
PRPF40B-203ENST00000508736 ALDH8A1Q9H2A2 487 aaPredicted RBP13.75□□□□□ -0.21
PRPF40B-203ENST00000508736 LY75O60449 1722 aa13.75□□□□□ -0.21
PRPF40B-203ENST00000508736 ZFYP08048 801 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 SYT1P21579 422 aa13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 KRT32Q14532 448 aa13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 ADCK5Q3MIX3 580 aa13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 CCDC152Q4G0S7 254 aa13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 ZMYM1Q5SVZ6 1142 aa13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 SYCE3A1L190 88 aa13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 RPS6KA4O75676 772 aa13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 BLOC1S2Q6QNY1 142 aa13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 CCDC83Q8IWF9 413 aa13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 NDUFB9Q9Y6M9 179 aa13.74□□□□□ -0.21
PRPF40B-203ENST00000508736 RNF113AO15541 343 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-203ENST00000508736 F13A1P00488 732 aa13.73□□□□□ -0.21
PRPF40B-203ENST00000508736 CPA1P15085 419 aa13.73□□□□□ -0.21
PRPF40B-203ENST00000508736 ADORA1P30542 326 aa13.73□□□□□ -0.21
PRPF40B-203ENST00000508736 CHAMP1Q96JM3 812 aa13.73□□□□□ -0.21
PRPF40B-203ENST00000508736 DSCC1Q9BVC3 393 aa13.73□□□□□ -0.21
PRPF40B-203ENST00000508736 ARAP2Q8WZ64 1704 aa13.73□□□□□ -0.21
PRPF40B-203ENST00000508736 PDCP20941 246 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 FGFR2P21802 821 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 GJB2P29033 226 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 PUM3Q15397 648 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 SMIM5Q71RC9 77 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 USP48Q86UV5 1035 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 LPIN2Q92539 896 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 RBSNQ9H1K0 784 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 NARFQ9UHQ1 456 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 GNPATO15228 680 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 HCLS1P14317 486 aaPredicted RBP13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 HMGB2P26583 209 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 HS1BP3Q53T59 392 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 KLHL34Q8N239 644 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 TSPY26PQ9H489 355 aa13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 NSFL1CQ9UNZ2 370 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-203ENST00000508736 LETM1O95202 739 aaPredicted RBP13.71□□□□□ -0.21
PRPF40B-203ENST00000508736 LARGE1O95461 756 aa13.71□□□□□ -0.21
PRPF40B-203ENST00000508736 UQCRFS1P1P0C7P4 283 aa13.71□□□□□ -0.21
PRPF40B-203ENST00000508736 RPS6KB1P23443 525 aa13.71□□□□□ -0.21
PRPF40B-203ENST00000508736 ARID4AP29374 1257 aaPredicted RBP13.71□□□□□ -0.21
PRPF40B-203ENST00000508736 SF3B3Q15393 1217 aaKnown RBP13.71□□□□□ -0.21
PRPF40B-203ENST00000508736 SLC10A5Q5PT55 438 aa13.71□□□□□ -0.21
PRPF40B-203ENST00000508736 UBE2HP62256 183 aa13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 TTF1Q15361 905 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 FOXD4L6Q3SYB3 417 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 FOXD4L3Q6VB84 417 aaPredicted RBP13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 SEC62Q99442 399 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 MPHOSPH8Q99549 860 aa13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 RTCBQ9Y3I0 505 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 COL24A1Q17RW2 1714 aa13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 IGHMBP2P38935 993 aaKnown RBP13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 FKBP4Q02790 459 aaKnown RBP eCLIP13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 ME3Q16798 604 aa13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 CCDC183Q5T5S1 534 aa13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 ZSCAN25Q6NSZ9 544 aa13.7□□□□□ -0.22
PRPF40B-203ENST00000508736 CDC5LQ99459 802 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms