RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 NUP133Q8WUM0 1156 aa16.9■□□□□ 0.3
ATP2C1-214ENST00000508532 CTIFO43310 598 aaKnown RBP16.9■□□□□ 0.3
ATP2C1-214ENST00000508532 DPCR1Q3MIW9 517 aa16.9■□□□□ 0.3
ATP2C1-214ENST00000508532 PAG1Q9NWQ8 432 aa16.9■□□□□ 0.3
ATP2C1-214ENST00000508532 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
ATP2C1-214ENST00000508532 ZNF202O95125 648 aa16.89■□□□□ 0.3
ATP2C1-214ENST00000508532 TOB2Q14106 344 aaPredicted RBP16.89■□□□□ 0.3
ATP2C1-214ENST00000508532 C10orf67Q8IYJ2 551 aa16.89■□□□□ 0.3
ATP2C1-214ENST00000508532 CAGE1Q8TC20 777 aa16.89■□□□□ 0.3
ATP2C1-214ENST00000508532 LZTFL1Q9NQ48 299 aa16.89■□□□□ 0.3
ATP2C1-214ENST00000508532 PUF60Q9UHX1 559 aaKnown RBP16.89■□□□□ 0.3
ATP2C1-214ENST00000508532 KIF5CO60282 957 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 TNNI3KQ59H18 835 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 NBPF6Q5VWK0 638 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 TXLNBQ8N3L3 684 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 NBPF4Q96M43 638 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 DACH1Q9UI36 760 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 PCDHA7Q9UN72 937 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 TAF6LQ9Y6J9 622 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 FPGT-TNNI3KV9GXZ4 949 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 CDKL5O76039 1030 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 RESTQ13127 1097 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 KIAA1468Q9P260 1216 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 PHACTR2O75167 634 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 CYP21A2P08686 494 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 TATP17735 454 aaPredicted RBP16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 NDUFA8P51970 172 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 GOLGA8FQ08AF8 430 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 GOLGA8DPQ0D2H9 430 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 AXDND1Q5T1B0 1012 aaPredicted RBP16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 NAA16Q6N069 864 aaPredicted RBP16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 KRBA2Q6ZNG9 492 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.29
ATP2C1-214ENST00000508532 TULP1O00294 542 aaPredicted RBP16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 PRC1O43663 620 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 SYCP1Q15431 976 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 SMARCE1Q969G3 411 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 ALG1Q9BT22 464 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 PRAMEF22A3QJZ6 481 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 SASH1O94885 1247 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 MLH3Q9UHC1 1453 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 IGSF1Q8N6C5 1336 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 PPP1R13BQ96KQ4 1090 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 IMPACTQ9P2X3 320 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 CABP4P57796 275 aa16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 ETF1P62495 437 aaKnown RBP16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 LLPHQ9BRT6 129 aaKnown RBP16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 SRRTQ9BXP5 876 aaKnown RBP16.88■□□□□ 0.29
ATP2C1-214ENST00000508532 CD163L1Q9NR16 1453 aa16.87■□□□□ 0.29
ATP2C1-214ENST00000508532 BABAM1Q9NWV8 329 aa16.87■□□□□ 0.29
ATP2C1-214ENST00000508532 MYL5Q02045 173 aa16.87■□□□□ 0.29
ATP2C1-214ENST00000508532 TRIM22Q8IYM9 498 aa16.87■□□□□ 0.29
ATP2C1-214ENST00000508532 ZC3H13Q5T200 1668 aaKnown RBP16.87■□□□□ 0.29
ATP2C1-214ENST00000508532 CRB1P82279 1406 aa16.87■□□□□ 0.29
ATP2C1-214ENST00000508532 SEC31AO94979 1220 aaKnown RBP16.87■□□□□ 0.29
ATP2C1-214ENST00000508532 ZBTB3Q9H5J0 574 aa16.87■□□□□ 0.29
ATP2C1-214ENST00000508532 KCNH5Q8NCM2 988 aa16.87■□□□□ 0.29
ATP2C1-214ENST00000508532 DDX21Q9NR30 783 aaKnown RBP eCLIP16.87■□□□□ 0.29
ATP2C1-214ENST00000508532 CDC25BP30305 580 aa16.86■□□□□ 0.29
ATP2C1-214ENST00000508532 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
ATP2C1-214ENST00000508532 METAP2P50579 478 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATP2C1-214ENST00000508532 MYO3AQ8NEV4 1616 aa16.86■□□□□ 0.29
ATP2C1-214ENST00000508532 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
ATP2C1-214ENST00000508532 RNMTO43148 476 aaKnown RBP16.86■□□□□ 0.29
ATP2C1-214ENST00000508532 SPECC1Q5M775 1068 aa16.86■□□□□ 0.29
ATP2C1-214ENST00000508532 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■■■□ 20.6
ATP2C1-214ENST00000508532 TBC1D2BQ9UPU7 963 aa16.86■□□□□ 0.29
ATP2C1-214ENST00000508532 CCDC70Q6NSX1 233 aa16.86■□□□□ 0.29
ATP2C1-214ENST00000508532 NCOA7Q8NI08 942 aa16.86■□□□□ 0.29
ATP2C1-214ENST00000508532 HOXB7P09629 217 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 IARSP41252 1262 aaKnown RBP16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 CLCN6P51797 869 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 BAG1Q99933 345 aaPredicted RBP16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 VPS18Q9P253 973 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 RCOR1Q9UKL0 485 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 INO80Q9ULG1 1556 aaPredicted RBP16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 OAS2P29728 719 aaKnown RBP16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 NSUN7Q8NE18 718 aaKnown RBP16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 PPP2R3AQ06190 1150 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 ATL3Q6DD88 541 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 ADALQ6DHV7 355 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 ANKRD24Q8TF21 1146 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 GOLPH3LQ9H4A5 285 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 CNNM1Q9NRU3 951 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 CLIC4Q9Y696 253 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 CAPN2P17655 700 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 ANO1Q5XXA6 986 aa16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 MORC2Q9Y6X9 1032 aaPredicted RBP16.85■□□□□ 0.29
ATP2C1-214ENST00000508532 GOLGA6L9A6NEM1 432 aa16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 SLFNL1Q499Z3 407 aa16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 DBNLQ9UJU6 430 aaKnown RBP16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 GOLGA8AA7E2F4 631 aa16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 PFKFB2O60825 505 aa16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 NLRP12P59046 1061 aa16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 SLC26A6Q9BXS9 759 aa16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 GIGYF1O75420 1035 aaPredicted RBP16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 RHOXF2BP0C7M4 288 aa16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 SART3Q15020 963 aaKnown RBP16.84■□□□□ 0.29
ATP2C1-214ENST00000508532 GOLGA1Q92805 767 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 535.9 ms