RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
HMGCLL1-208ENST00000508459 ARAP2Q8WZ64 1704 aa17.57■□□□□ 0.4
HMGCLL1-208ENST00000508459 SALL3Q9BXA9 1300 aa17.56■□□□□ 0.4
HMGCLL1-208ENST00000508459 FGFR2P21802 821 aa17.56■□□□□ 0.4
HMGCLL1-208ENST00000508459 PTGER2P43116 358 aa17.56■□□□□ 0.4
HMGCLL1-208ENST00000508459 TTF1Q15361 905 aaPredicted RBP17.56■□□□□ 0.4
HMGCLL1-208ENST00000508459 TTC39AQ5SRH9 613 aa17.56■□□□□ 0.4
HMGCLL1-208ENST00000508459 PRPF40BQ6NWY9 871 aaKnown RBP17.56■□□□□ 0.4
HMGCLL1-208ENST00000508459 ZNF804AQ7Z570 1209 aa17.56■□□□□ 0.4
HMGCLL1-208ENST00000508459 XAGE2Q96GT9 111 aa17.56■□□□□ 0.4
HMGCLL1-208ENST00000508459 COL11A2P13942 1736 aaPredicted RBP17.55■□□□□ 0.4
HMGCLL1-208ENST00000508459 CCDC93Q567U6 631 aa17.55■□□□□ 0.4
HMGCLL1-208ENST00000508459 DALRD3Q5D0E6 543 aaKnown RBP17.55■□□□□ 0.4
HMGCLL1-208ENST00000508459 TTC22Q5TAA0 569 aa17.55■□□□□ 0.4
HMGCLL1-208ENST00000508459 DPP8Q6V1X1 898 aaPredicted RBP17.55■□□□□ 0.4
HMGCLL1-208ENST00000508459 MPNDQ8N594 471 aa17.55■□□□□ 0.4
HMGCLL1-208ENST00000508459 PDS5AQ29RF7 1337 aaKnown RBP17.54■□□□□ 0.4
HMGCLL1-208ENST00000508459 PDE4AP27815 886 aa17.54■□□□□ 0.4
HMGCLL1-208ENST00000508459 ZGPATQ8N5A5 531 aaKnown RBP17.54■□□□□ 0.4
HMGCLL1-208ENST00000508459 DBNLQ9UJU6 430 aaKnown RBP17.54■□□□□ 0.4
HMGCLL1-208ENST00000508459 NSFL1CQ9UNZ2 370 aaKnown RBP17.54■□□□□ 0.4
HMGCLL1-208ENST00000508459 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
HMGCLL1-208ENST00000508459 MED23Q9ULK4 1368 aa17.53■□□□□ 0.4
HMGCLL1-208ENST00000508459 TIMM10P62072 90 aa17.53■□□□□ 0.4
HMGCLL1-208ENST00000508459 EVI5LQ96CN4 794 aa17.53■□□□□ 0.4
HMGCLL1-208ENST00000508459 CCDC8Q9H0W5 538 aaPredicted RBP17.53■□□□□ 0.4
HMGCLL1-208ENST00000508459 UFL1O94874 794 aa17.52■□□□□ 0.4
HMGCLL1-208ENST00000508459 ARID4AP29374 1257 aaPredicted RBP17.52■□□□□ 0.4
HMGCLL1-208ENST00000508459 ZSCAN25Q6NSZ9 544 aa17.52■□□□□ 0.4
HMGCLL1-208ENST00000508459 ZC3H12CQ9C0D7 883 aaKnown RBP17.52■□□□□ 0.4
HMGCLL1-208ENST00000508459 DENND2AQ9ULE3 1009 aa17.52■□□□□ 0.4
HMGCLL1-208ENST00000508459 A0A1B0GUL6 1792 aa17.52■□□□□ 0.4
HMGCLL1-208ENST00000508459 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.39
HMGCLL1-208ENST00000508459 G3V3G9 751 aa17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 FRAT2O75474 233 aaPredicted RBP17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 DPEP1P16444 411 aa17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 HIBADHP31937 336 aaKnown RBP17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 DCAF8Q5TAQ9 597 aa17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 RUFY2Q8WXA3 655 aa17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 PSMD1Q99460 953 aa17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 HAUS7Q99871 368 aa17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 DBNDD2Q9BQY9 259 aa17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
HMGCLL1-208ENST00000508459 TRIM6-TRIM34B2RNG4 842 aa17.5■□□□□ 0.39
HMGCLL1-208ENST00000508459 C6orf229H3BNL8 230 aa17.5■□□□□ 0.39
HMGCLL1-208ENST00000508459 TAF5LO75529 589 aa17.5■□□□□ 0.39
HMGCLL1-208ENST00000508459 ZFYP08048 801 aaPredicted RBP17.5■□□□□ 0.39
HMGCLL1-208ENST00000508459 CHRNA5P30532 468 aa17.5■□□□□ 0.39
HMGCLL1-208ENST00000508459 CCDC102BQ68D86 513 aa17.5■□□□□ 0.39
HMGCLL1-208ENST00000508459 C16orf71Q8IYS4 520 aaPredicted RBP17.5■□□□□ 0.39
HMGCLL1-208ENST00000508459 HELBQ8NG08 1087 aaPredicted RBP17.5■□□□□ 0.39
HMGCLL1-208ENST00000508459 PI4K2BQ8TCG2 481 aa17.5■□□□□ 0.39
HMGCLL1-208ENST00000508459 RTFDC1Q9BY42 306 aaPredicted RBP17.5■□□□□ 0.39
HMGCLL1-208ENST00000508459 CDC45O75419 566 aa17.49■□□□□ 0.39
HMGCLL1-208ENST00000508459 GPSM2P81274 684 aa17.49■□□□□ 0.39
HMGCLL1-208ENST00000508459 SPTY2D1Q68D10 685 aaPredicted RBP17.49■□□□□ 0.39
HMGCLL1-208ENST00000508459 TBC1D16Q8TBP0 767 aa17.49■□□□□ 0.39
HMGCLL1-208ENST00000508459 COA1Q9GZY4 146 aa17.49■□□□□ 0.39
HMGCLL1-208ENST00000508459 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
HMGCLL1-208ENST00000508459 TAF1P21675 1872 aa17.49■□□□□ 0.39
HMGCLL1-208ENST00000508459 A0A0G2JLW4 131 aa17.48■□□□□ 0.39
HMGCLL1-208ENST00000508459 MFAP1P55081 439 aaKnown RBP17.48■□□□□ 0.39
HMGCLL1-208ENST00000508459 WASHC4Q2M389 1173 aa17.48■□□□□ 0.39
HMGCLL1-208ENST00000508459 FBXO33Q7Z6M2 555 aa17.48■□□□□ 0.39
HMGCLL1-208ENST00000508459 TBC1D22AQ8WUA7 517 aa17.48■□□□□ 0.39
HMGCLL1-208ENST00000508459 AK9Q5TCS8 1911 aa17.47■□□□□ 0.39
HMGCLL1-208ENST00000508459 KLHL34Q8N239 644 aa17.47■□□□□ 0.39
HMGCLL1-208ENST00000508459 WDR66Q8TBY9 1149 aa17.47■□□□□ 0.39
HMGCLL1-208ENST00000508459 C7orf43Q8WVR3 580 aa17.47■□□□□ 0.39
HMGCLL1-208ENST00000508459 PAG1Q9NWQ8 432 aa17.47■□□□□ 0.39
HMGCLL1-208ENST00000508459 CACNA1SQ13698 1873 aa17.46■□□□□ 0.39
HMGCLL1-208ENST00000508459 PODNQ7Z5L7 613 aa17.46■□□□□ 0.39
HMGCLL1-208ENST00000508459 CERS3Q8IU89 383 aa17.46■□□□□ 0.39
HMGCLL1-208ENST00000508459 SPATA5Q8NB90 893 aa17.46■□□□□ 0.39
HMGCLL1-208ENST00000508459 OTUD7AQ8TE49 926 aaPredicted RBP17.46■□□□□ 0.39
HMGCLL1-208ENST00000508459 SLX4Q8IY92 1834 aa17.46■□□□□ 0.39
HMGCLL1-208ENST00000508459 LTBP1Q14766 1721 aa17.46■□□□□ 0.39
HMGCLL1-208ENST00000508459 BRCA1P38398 1863 aaKnown RBP17.46■□□□□ 0.38
HMGCLL1-208ENST00000508459 LTBP3Q9NS15 1303 aa17.46■□□□□ 0.38
HMGCLL1-208ENST00000508459 ARFGEF1Q9Y6D6 1849 aa17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 EPB41L2O43491 1005 aaKnown RBP17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 SDSP20132 328 aa17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 KCNA3P22001 575 aa17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 MMP14P50281 582 aa17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 FKBP4Q02790 459 aaKnown RBP eCLIP17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 MAP3K12Q12852 859 aa17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 SLF2Q8IX21 1173 aa17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 RILPL2Q969X0 211 aa17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 FAM84BQ96KN1 310 aaPredicted RBP17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 BOLA2Q9H3K6 86 aa17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 DIAPH3Q9NSV4 1193 aa17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 TLR7Q9NYK1 1049 aaKnown RBP17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 SUGT1Q9Y2Z0 365 aa17.45■□□□□ 0.38
HMGCLL1-208ENST00000508459 KIAA1551Q9HCM1 1747 aa17.44■□□□□ 0.38
HMGCLL1-208ENST00000508459 REC8O95072 547 aa17.44■□□□□ 0.38
HMGCLL1-208ENST00000508459 IL1R1P14778 569 aa17.44■□□□□ 0.38
HMGCLL1-208ENST00000508459 KBTBD3Q8NAB2 608 aa17.44■□□□□ 0.38
HMGCLL1-208ENST00000508459 FSD1Q9BTV5 496 aa17.44■□□□□ 0.38
HMGCLL1-208ENST00000508459 RAD50Q92878 1312 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms