RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 MUC3BQ9H195 1237 aa8.26□□□□□ -1.09
USO1-202ENST00000508454 SH2B1Q9NRF2 756 aaPredicted RBP8.26□□□□□ -1.09
USO1-202ENST00000508454 SALL4Q9UJQ4 1053 aa8.26□□□□□ -1.09
USO1-202ENST00000508454 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
USO1-202ENST00000508454 PDGFAP04085 211 aa8.25□□□□□ -1.09
USO1-202ENST00000508454 SSFA2P28290 1259 aa8.25□□□□□ -1.09
USO1-202ENST00000508454 CDC27P30260 824 aa8.25□□□□□ -1.09
USO1-202ENST00000508454 MTMR3Q13615 1198 aa8.25□□□□□ -1.09
USO1-202ENST00000508454 PHLDB3Q6NSJ2 640 aa8.25□□□□□ -1.09
USO1-202ENST00000508454 FOXD4L4Q8WXT5 416 aaPredicted RBP8.25□□□□□ -1.09
USO1-202ENST00000508454 PSMG3-AS1Q96PY0 264 aa8.25□□□□□ -1.09
USO1-202ENST00000508454 KRTAP9-2Q9BYQ4 174 aa8.25□□□□□ -1.09
USO1-202ENST00000508454 ADAM19Q9H013 955 aa8.25□□□□□ -1.09
USO1-202ENST00000508454 SMNDC1O75940 238 aaKnown RBP eCLIP8.24□□□□□ -1.09
USO1-202ENST00000508454 MPSTP25325 297 aa8.24□□□□□ -1.09
USO1-202ENST00000508454 CDC25BP30305 580 aa8.24□□□□□ -1.09
USO1-202ENST00000508454 EIF1AXP47813 144 aaKnown RBP8.24□□□□□ -1.09
USO1-202ENST00000508454 KIAA1211Q6ZU35 1233 aa8.24□□□□□ -1.09
USO1-202ENST00000508454 ZNF438Q7Z4V0 828 aa8.24□□□□□ -1.09
USO1-202ENST00000508454 GTF3C2Q8WUA4 911 aaPredicted RBP8.24□□□□□ -1.09
USO1-202ENST00000508454 HHIPQ96QV1 700 aa8.24□□□□□ -1.09
USO1-202ENST00000508454 RNF112Q9ULX5 631 aa8.24□□□□□ -1.09
USO1-202ENST00000508454 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
USO1-202ENST00000508454 CARNS1A5YM72 827 aa8.23□□□□□ -1.09
USO1-202ENST00000508454 FSCN2O14926 492 aa8.23□□□□□ -1.09
USO1-202ENST00000508454 DDX3YO15523 660 aaKnown RBP8.23□□□□□ -1.09
USO1-202ENST00000508454 FSTP19883 344 aa8.23□□□□□ -1.09
USO1-202ENST00000508454 CD68P34810 354 aaPredicted RBP8.23□□□□□ -1.09
USO1-202ENST00000508454 DNM1Q05193 864 aaKnown RBP8.23□□□□□ -1.09
USO1-202ENST00000508454 NCAPG2Q86XI2 1143 aa8.23□□□□□ -1.09
USO1-202ENST00000508454 ARMC10Q8N2F6 343 aa8.23□□□□□ -1.09
USO1-202ENST00000508454 SPACA7Q96KW9 195 aa8.23□□□□□ -1.09
USO1-202ENST00000508454 TRPA1O75762 1119 aa8.22□□□□□ -1.09
USO1-202ENST00000508454 NPR3P17342 541 aa8.22□□□□□ -1.09
USO1-202ENST00000508454 DZANK1Q9NVP4 752 aa8.22□□□□□ -1.09
USO1-202ENST00000508454 CCDC9Q9Y3X0 531 aaKnown RBP8.22□□□□□ -1.09
USO1-202ENST00000508454 GLB1P16278 677 aa8.21□□□□□ -1.1
USO1-202ENST00000508454 NOM1Q5C9Z4 860 aaKnown RBP8.21□□□□□ -1.1
USO1-202ENST00000508454 UBASH3BQ8TF42 649 aa8.21□□□□□ -1.1
USO1-202ENST00000508454 KLHDC7BQ96G42 594 aa8.21□□□□□ -1.1
USO1-202ENST00000508454 KRTAP9-6A0A140TA67 174 aa8.2□□□□□ -1.1
USO1-202ENST00000508454 MZF1P28698 734 aaPredicted RBP8.2□□□□□ -1.1
USO1-202ENST00000508454 HGSNATQ68CP4 663 aa8.2□□□□□ -1.1
USO1-202ENST00000508454 ACAD11Q709F0 780 aa8.2□□□□□ -1.1
USO1-202ENST00000508454 DCAF11Q8TEB1 546 aa8.2□□□□□ -1.1
USO1-202ENST00000508454 PTPRAP18433 802 aa8.19□□□□□ -1.1
USO1-202ENST00000508454 KLHL23Q8NBE8 558 aa8.19□□□□□ -1.1
USO1-202ENST00000508454 FAM46AQ96IP4 442 aaKnown RBP8.19□□□□□ -1.1
USO1-202ENST00000508454 SOX13Q9UN79 622 aa8.19□□□□□ -1.1
USO1-202ENST00000508454 POLIQ9UNA4 740 aa8.19□□□□□ -1.1
USO1-202ENST00000508454 H3BRJ5 948 aa8.18□□□□□ -1.1
USO1-202ENST00000508454 FZD6O60353 706 aa8.18□□□□□ -1.1
USO1-202ENST00000508454 CES1P23141 567 aa8.18□□□□□ -1.1
USO1-202ENST00000508454 RAXQ9Y2V3 346 aa8.18□□□□□ -1.1
USO1-202ENST00000508454 EREGO14944 169 aa8.17□□□□□ -1.1
USO1-202ENST00000508454 RPLP1P05386 114 aaKnown RBP8.17□□□□□ -1.1
USO1-202ENST00000508454 C8orf34Q49A92 452 aa8.17□□□□□ -1.1
USO1-202ENST00000508454 FOXD3Q9UJU5 478 aaPredicted RBP8.17□□□□□ -1.1
USO1-202ENST00000508454 PDE2AO00408 941 aaPredicted RBP8.16□□□□□ -1.1
USO1-202ENST00000508454 TNFRSF21O75509 655 aa8.16□□□□□ -1.1
USO1-202ENST00000508454 MED26O95402 600 aa8.16□□□□□ -1.1
USO1-202ENST00000508454 CD97P48960 835 aa8.16□□□□□ -1.1
USO1-202ENST00000508454 TMEM102Q8N9M5 508 aaPredicted RBP8.16□□□□□ -1.1
USO1-202ENST00000508454 ZKSCAN3Q9BRR0 538 aa8.16□□□□□ -1.1
USO1-202ENST00000508454 SEC31BQ9NQW1 1179 aa8.16□□□□□ -1.1
USO1-202ENST00000508454 PPP1R15AO75807 674 aaPredicted RBP8.15□□□□□ -1.1
USO1-202ENST00000508454 PIP4K2BP78356 416 aa8.15□□□□□ -1.1
USO1-202ENST00000508454 DUOXA2Q1HG44 320 aa8.15□□□□□ -1.1
USO1-202ENST00000508454 PEAR1Q5VY43 1037 aaPredicted RBP8.15□□□□□ -1.1
USO1-202ENST00000508454 VN1R5Q7Z5H4 357 aa8.15□□□□□ -1.1
USO1-202ENST00000508454 NXPE3Q969Y0 559 aa8.15□□□□□ -1.1
USO1-202ENST00000508454 TRAIPQ9BWF2 469 aa8.15□□□□□ -1.1
USO1-202ENST00000508454 IGLV1-40P01703 118 aa8.14□□□□□ -1.11
USO1-202ENST00000508454 NBPF11Q86T75 865 aa8.14□□□□□ -1.11
USO1-202ENST00000508454 SLC51AQ86UW1 340 aa8.14□□□□□ -1.11
USO1-202ENST00000508454 GJD3Q8N144 294 aa8.14□□□□□ -1.11
USO1-202ENST00000508454 WNT8BQ93098 351 aa8.14□□□□□ -1.11
USO1-202ENST00000508454 MYRFLQ96LU7 910 aa8.14□□□□□ -1.11
USO1-202ENST00000508454 C7orf69Q9H7B7 122 aa8.14□□□□□ -1.11
USO1-202ENST00000508454 LATS2Q9NRM7 1088 aa8.14□□□□□ -1.11
USO1-202ENST00000508454 CCDC87Q9NVE4 849 aa8.14□□□□□ -1.11
USO1-202ENST00000508454 TGFB1P01137 390 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 PREPP48147 710 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 NLRP12P59046 1061 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 ECM1Q16610 540 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 UVSSAQ2YD98 709 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 FAM117BQ6P1L5 589 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 ZDHHC13Q8IUH4 622 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 OSMRQ99650 979 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 CEP41Q9BYV8 373 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 OSGEPQ9NPF4 335 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 STOML1Q9UBI4 398 aa8.13□□□□□ -1.11
USO1-202ENST00000508454 DHX15O43143 795 aaKnown RBP8.12□□□□□ -1.11
USO1-202ENST00000508454 PCSK2P16519 638 aa8.12□□□□□ -1.11
USO1-202ENST00000508454 SSTR4P31391 388 aa8.12□□□□□ -1.11
USO1-202ENST00000508454 ZNF211Q13398 564 aaPredicted RBP8.12□□□□□ -1.11
USO1-202ENST00000508454 TRIM42Q8IWZ5 723 aa8.12□□□□□ -1.11
USO1-202ENST00000508454 UTP4Q969X6 686 aaKnown RBP8.12□□□□□ -1.11
USO1-202ENST00000508454 ANO2Q9NQ90 1003 aa8.12□□□□□ -1.11
USO1-202ENST00000508454 HMX2A2RU54 273 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms