RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 FBXW7Q969H0 707 aa18.09■□□□□ 0.49
DDR1-260ENST00000507533 SLC10A4Q96EP9 437 aa18.09■□□□□ 0.49
DDR1-260ENST00000507533 CCDC85AQ96PX6 553 aaPredicted RBP18.09■□□□□ 0.49
DDR1-260ENST00000507533 DBF4Q9UBU7 674 aaPredicted RBP18.09■□□□□ 0.49
DDR1-260ENST00000507533 ARMC5Q96C12 935 aa18.08■□□□□ 0.48
DDR1-260ENST00000507533 ERO1AQ96HE7 468 aa18.08■□□□□ 0.48
DDR1-260ENST00000507533 WTIPA6NIX2 430 aaPredicted RBP18.07■□□□□ 0.48
DDR1-260ENST00000507533 CHL1O00533 1208 aa18.07■□□□□ 0.48
DDR1-260ENST00000507533 TMPOP42166 694 aaKnown RBP18.07■□□□□ 0.48
DDR1-260ENST00000507533 APOBEC3FQ8IUX4 373 aaKnown RBP18.07■□□□□ 0.48
DDR1-260ENST00000507533 ANKRD18AQ8IVF6 992 aa18.07■□□□□ 0.48
DDR1-260ENST00000507533 CD99L2Q8TCZ2 262 aa18.07■□□□□ 0.48
DDR1-260ENST00000507533 HYPKQ9NX55 129 aa18.07■□□□□ 0.48
DDR1-260ENST00000507533 FZD1Q9UP38 647 aa18.07■□□□□ 0.48
DDR1-260ENST00000507533 LAS1LQ9Y4W2 734 aaKnown RBP18.07■□□□□ 0.48
DDR1-260ENST00000507533 MYO3BQ8WXR4 1341 aa18.06■□□□□ 0.48
DDR1-260ENST00000507533 IGF2BP3O00425 579 aaKnown RBP eCLIP18.06■□□□□ 0.48
DDR1-260ENST00000507533 PDE8AO60658 829 aa18.06■□□□□ 0.48
DDR1-260ENST00000507533 STRIP1Q5VSL9 837 aa18.06■□□□□ 0.48
DDR1-260ENST00000507533 RIC3Q7Z5B4 369 aa18.06■□□□□ 0.48
DDR1-260ENST00000507533 EFCC1Q9HA90 598 aa18.06■□□□□ 0.48
DDR1-260ENST00000507533 HOXB7P09629 217 aa18.05■□□□□ 0.48
DDR1-260ENST00000507533 ZBTB48P10074 688 aaPredicted RBP18.05■□□□□ 0.48
DDR1-260ENST00000507533 MMP14P50281 582 aa18.05■□□□□ 0.48
DDR1-260ENST00000507533 TMEM106CQ9BVX2 250 aa18.05■□□□□ 0.48
DDR1-260ENST00000507533 CENPFP49454 3210 aa18.05■□□□□ 0.48
DDR1-260ENST00000507533 PSME4Q14997 1843 aa18.05■□□□□ 0.48
DDR1-260ENST00000507533 MED23Q9ULK4 1368 aa18.04■□□□□ 0.48
DDR1-260ENST00000507533 JARID2Q92833 1246 aaPredicted RBP18.04■□□□□ 0.48
DDR1-260ENST00000507533 WNK4Q96J92 1243 aa18.04■□□□□ 0.48
DDR1-260ENST00000507533 PCCAP05165 728 aaPredicted RBP18.03■□□□□ 0.48
DDR1-260ENST00000507533 GOLGA2Q08379 1002 aa18.03■□□□□ 0.48
DDR1-260ENST00000507533 CRHR2Q13324 411 aa18.03■□□□□ 0.48
DDR1-260ENST00000507533 OTUD7BQ6GQQ9 843 aa18.03■□□□□ 0.48
DDR1-260ENST00000507533 CLMNQ96JQ2 1002 aa18.03■□□□□ 0.48
DDR1-260ENST00000507533 MYD88Q99836 296 aa18.03■□□□□ 0.48
DDR1-260ENST00000507533 SP3Q02447 781 aa18.02■□□□□ 0.48
DDR1-260ENST00000507533 NEUROD2Q15784 382 aa18.02■□□□□ 0.48
DDR1-260ENST00000507533 MAP3K11Q16584 847 aa18.02■□□□□ 0.48
DDR1-260ENST00000507533 KIAA0825Q8IV33 1275 aa18.02■□□□□ 0.48
DDR1-260ENST00000507533 CCDC191Q8NCU4 936 aa18.02■□□□□ 0.48
DDR1-260ENST00000507533 COA1Q9GZY4 146 aa18.02■□□□□ 0.48
DDR1-260ENST00000507533 DEFB129Q9H1M3 183 aa18.02■□□□□ 0.48
DDR1-260ENST00000507533 MINPP1Q9UNW1 487 aa18.02■□□□□ 0.48
DDR1-260ENST00000507533 PPP1R12BO60237 982 aaPredicted RBP18.01■□□□□ 0.47
DDR1-260ENST00000507533 CCT4P50991 539 aaKnown RBP18.01■□□□□ 0.47
DDR1-260ENST00000507533 TTLL5Q6EMB2 1281 aa18.01■□□□□ 0.47
DDR1-260ENST00000507533 ZBED3Q96IU2 234 aaPredicted RBP18.01■□□□□ 0.47
DDR1-260ENST00000507533 ZNF333Q96JL9 665 aa18.01■□□□□ 0.47
DDR1-260ENST00000507533 CDC5LQ99459 802 aaKnown RBP18.01■□□□□ 0.47
DDR1-260ENST00000507533 BRCA2P51587 3418 aa18.01■□□□□ 0.47
DDR1-260ENST00000507533 RBBP6Q7Z6E9 1792 aaKnown RBP18■□□□□ 0.47
DDR1-260ENST00000507533 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
DDR1-260ENST00000507533 BSDC1Q9NW68 430 aaPredicted RBP18■□□□□ 0.47
DDR1-260ENST00000507533 CWC25Q9NXE8 425 aaPredicted RBP18■□□□□ 0.47
DDR1-260ENST00000507533 UNCXA6NJT0 531 aa17.99■□□□□ 0.47
DDR1-260ENST00000507533 H0YGN5 161 aa17.99■□□□□ 0.47
DDR1-260ENST00000507533 CAP1Q01518 475 aa17.99■□□□□ 0.47
DDR1-260ENST00000507533 NBPF11Q86T75 865 aa17.99■□□□□ 0.47
DDR1-260ENST00000507533 TXNRD3Q86VQ6 643 aa17.99■□□□□ 0.47
DDR1-260ENST00000507533 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
DDR1-260ENST00000507533 COL1A1P02452 1464 aaPredicted RBP17.99■□□□□ 0.47
DDR1-260ENST00000507533 KIAA0100Q14667 2235 aaKnown RBP17.98■□□□□ 0.47
DDR1-260ENST00000507533 GJA5P36382 358 aa17.98■□□□□ 0.47
DDR1-260ENST00000507533 DLGAP5Q15398 846 aa17.98■□□□□ 0.47
DDR1-260ENST00000507533 SLC4A8Q2Y0W8 1093 aa17.98■□□□□ 0.47
DDR1-260ENST00000507533 OTUD5Q96G74 571 aa17.98■□□□□ 0.47
DDR1-260ENST00000507533 PTPN18Q99952 460 aa17.98■□□□□ 0.47
DDR1-260ENST00000507533 CTSWP56202 376 aa17.97■□□□□ 0.47
DDR1-260ENST00000507533 GTF2IP78347 998 aa17.97■□□□□ 0.47
DDR1-260ENST00000507533 SUPT20HL1Q3ZLR7 823 aa17.97■□□□□ 0.47
DDR1-260ENST00000507533 SLC9C1Q4G0N8 1177 aa17.97■□□□□ 0.47
DDR1-260ENST00000507533 TRIM35Q9UPQ4 493 aa17.97■□□□□ 0.47
DDR1-260ENST00000507533 LEMD3Q9Y2U8 911 aa17.97■□□□□ 0.47
DDR1-260ENST00000507533 PPP2R3BQ9Y5P8 575 aa17.97■□□□□ 0.47
DDR1-260ENST00000507533 TESPA1A2RU30 521 aaPredicted RBP17.96■□□□□ 0.47
DDR1-260ENST00000507533 ARHGEF6Q15052 776 aa17.96■□□□□ 0.47
DDR1-260ENST00000507533 TTLL11Q8NHH1 800 aa17.96■□□□□ 0.47
DDR1-260ENST00000507533 PTCH2Q9Y6C5 1203 aa17.96■□□□□ 0.47
DDR1-260ENST00000507533 SSC5DA1L4H1 1573 aa17.96■□□□□ 0.46
DDR1-260ENST00000507533 SZT2Q5T011 3432 aa17.95■□□□□ 0.46
DDR1-260ENST00000507533 IREB2P48200 963 aaKnown RBP17.95■□□□□ 0.46
DDR1-260ENST00000507533 CHRDL2Q6WN34 429 aa17.95■□□□□ 0.46
DDR1-260ENST00000507533 CCDC146Q8IYE0 955 aa17.95■□□□□ 0.46
DDR1-260ENST00000507533 METTL22Q9BUU2 404 aaPredicted RBP17.95■□□□□ 0.46
DDR1-260ENST00000507533 GREM2Q9H772 168 aa17.95■□□□□ 0.46
DDR1-260ENST00000507533 DLL1O00548 723 aa17.94■□□□□ 0.46
DDR1-260ENST00000507533 USP2O75604 605 aaPredicted RBP17.94■□□□□ 0.46
DDR1-260ENST00000507533 MYCP01106 439 aaPredicted RBP17.94■□□□□ 0.46
DDR1-260ENST00000507533 KLRK1P26718 216 aa17.94■□□□□ 0.46
DDR1-260ENST00000507533 NBPF12Q5TAG4 269 aaPredicted RBP17.94■□□□□ 0.46
DDR1-260ENST00000507533 ANKRD13AQ8IZ07 590 aa17.94■□□□□ 0.46
DDR1-260ENST00000507533 MTMR14Q8NCE2 650 aa17.94■□□□□ 0.46
DDR1-260ENST00000507533 ZNF804BA4D1E1 1349 aa17.94■□□□□ 0.46
DDR1-260ENST00000507533 CLRN2A0PK11 232 aa17.93■□□□□ 0.46
DDR1-260ENST00000507533 PCDHAC2Q9Y5I4 1007 aa17.93■□□□□ 0.46
DDR1-260ENST00000507533 ZNF646O15015 1829 aaPredicted RBP17.93■□□□□ 0.46
DDR1-260ENST00000507533 MYO1BO43795 1136 aa17.92■□□□□ 0.46
DDR1-260ENST00000507533 ZEB1P37275 1124 aaPredicted RBP17.92■□□□□ 0.46
DDR1-260ENST00000507533 IGHMBP2P38935 993 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms