RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 MYO3BQ8WXR4 1341 aa21.29■■□□□ 1
SNF8-205ENST00000507302 STRIP1Q5VSL9 837 aa21.29■■□□□ 1
SNF8-205ENST00000507302 ZBED3Q96IU2 234 aaPredicted RBP21.29■■□□□ 1
SNF8-205ENST00000507302 IFT57Q9NWB7 429 aa21.29■■□□□ 1
SNF8-205ENST00000507302 MINPP1Q9UNW1 487 aa21.29■■□□□ 1
SNF8-205ENST00000507302 ADAMTS8Q9UP79 889 aa21.29■■□□□ 1
SNF8-205ENST00000507302 SCAF8Q9UPN6 1271 aaKnown RBP21.29■■□□□ 1
SNF8-205ENST00000507302 LDLRAD1Q5T700 205 aa21.28■■□□□ 1
SNF8-205ENST00000507302 PRAMEF18Q5VWM3 479 aa21.28■■□□□ 1
SNF8-205ENST00000507302 TTLL11Q8NHH1 800 aa21.28■■□□□ 1
SNF8-205ENST00000507302 HDAC9Q9UKV0 1011 aa21.28■■□□□ 1
SNF8-205ENST00000507302 CTSWP56202 376 aa21.27■■□□□ 1
SNF8-205ENST00000507302 JARID2Q92833 1246 aaPredicted RBP21.27■■□□□ 1
SNF8-205ENST00000507302 CDC5LQ99459 802 aaKnown RBP21.27■■□□□ 1
SNF8-205ENST00000507302 RBBP6Q7Z6E9 1792 aaKnown RBP21.27■■□□□ 1
SNF8-205ENST00000507302 CCT4P50991 539 aaKnown RBP21.26■□□□□ 0.99
SNF8-205ENST00000507302 SREBF2Q12772 1141 aa21.26■□□□□ 0.99
SNF8-205ENST00000507302 CCDC85AQ96PX6 553 aaPredicted RBP21.26■□□□□ 0.99
SNF8-205ENST00000507302 MXD3Q9BW11 206 aa21.26■□□□□ 0.99
SNF8-205ENST00000507302 COA1Q9GZY4 146 aa21.26■□□□□ 0.99
SNF8-205ENST00000507302 ECM29Q5VYK3 1845 aa21.26■□□□□ 0.99
SNF8-205ENST00000507302 MKI67P46013 3256 aaKnown RBP21.26■□□□□ 0.99
SNF8-205ENST00000507302 COL1A1P02452 1464 aaPredicted RBP21.26■□□□□ 0.99
SNF8-205ENST00000507302 IGKV5-2P06315 115 aa21.25■□□□□ 0.99
SNF8-205ENST00000507302 PTPN12Q05209 780 aaKnown RBP21.25■□□□□ 0.99
SNF8-205ENST00000507302 OGFOD1Q8N543 542 aa21.25■□□□□ 0.99
SNF8-205ENST00000507302 R3HDMLQ9H3Y0 253 aa21.25■□□□□ 0.99
SNF8-205ENST00000507302 FKTNO75072 461 aa21.24■□□□□ 0.99
SNF8-205ENST00000507302 NF2P35240 595 aa21.24■□□□□ 0.99
SNF8-205ENST00000507302 GNAI1P63096 354 aa21.24■□□□□ 0.99
SNF8-205ENST00000507302 TXNRD3Q86VQ6 643 aa21.24■□□□□ 0.99
SNF8-205ENST00000507302 C8orf58Q8NAV2 365 aa21.24■□□□□ 0.99
SNF8-205ENST00000507302 GREM2Q9H772 168 aa21.24■□□□□ 0.99
SNF8-205ENST00000507302 DDX58O95786 925 aaKnown RBP21.23■□□□□ 0.99
SNF8-205ENST00000507302 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
SNF8-205ENST00000507302 MAP3K11Q16584 847 aa21.23■□□□□ 0.99
SNF8-205ENST00000507302 SPRYD7Q5W111 196 aa21.23■□□□□ 0.99
SNF8-205ENST00000507302 LEMD3Q9Y2U8 911 aa21.23■□□□□ 0.99
SNF8-205ENST00000507302 KSR2Q6VAB6 950 aa21.22■□□□□ 0.99
SNF8-205ENST00000507302 APOBEC3FQ8IUX4 373 aaKnown RBP21.22■□□□□ 0.99
SNF8-205ENST00000507302 CHMP4AQ9BY43 222 aa21.22■□□□□ 0.99
SNF8-205ENST00000507302 MAP3K2Q9Y2U5 619 aa21.22■□□□□ 0.99
SNF8-205ENST00000507302 CENPFP49454 3210 aa21.21■□□□□ 0.99
SNF8-205ENST00000507302 ALDH1A1P00352 501 aa21.21■□□□□ 0.99
SNF8-205ENST00000507302 CCDC30Q5VVM6 783 aa21.21■□□□□ 0.99
SNF8-205ENST00000507302 ARMC9Q7Z3E5 817 aa21.21■□□□□ 0.99
SNF8-205ENST00000507302 SSC5DA1L4H1 1573 aa21.2■□□□□ 0.98
SNF8-205ENST00000507302 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
SNF8-205ENST00000507302 SASH1O94885 1247 aa21.2■□□□□ 0.98
SNF8-205ENST00000507302 INHBEP58166 350 aa21.2■□□□□ 0.98
SNF8-205ENST00000507302 CALD1Q05682 793 aaKnown RBP21.2■□□□□ 0.98
SNF8-205ENST00000507302 TTLL12Q14166 644 aaPredicted RBP21.2■□□□□ 0.98
SNF8-205ENST00000507302 MTMR14Q8NCE2 650 aa21.2■□□□□ 0.98
SNF8-205ENST00000507302 PLA2G12BQ9BX93 195 aa21.2■□□□□ 0.98
SNF8-205ENST00000507302 IRS2Q9Y4H2 1338 aa21.2■□□□□ 0.98
SNF8-205ENST00000507302 A0A1B0GUL6 1792 aa21.2■□□□□ 0.98
SNF8-205ENST00000507302 UNCXA6NJT0 531 aa21.19■□□□□ 0.98
SNF8-205ENST00000507302 H7C1W4 665 aa21.19■□□□□ 0.98
SNF8-205ENST00000507302 TTLL5Q6EMB2 1281 aa21.19■□□□□ 0.98
SNF8-205ENST00000507302 BRCA2P51587 3418 aa21.18■□□□□ 0.98
SNF8-205ENST00000507302 PI4KAP2A4QPH2 592 aa21.18■□□□□ 0.98
SNF8-205ENST00000507302 ZBTB48P10074 688 aaPredicted RBP21.18■□□□□ 0.98
SNF8-205ENST00000507302 PI4KAP1Q8N8J0 262 aa21.18■□□□□ 0.98
SNF8-205ENST00000507302 GCC1Q96CN9 775 aa21.18■□□□□ 0.98
SNF8-205ENST00000507302 ZNF804BA4D1E1 1349 aa21.18■□□□□ 0.98
SNF8-205ENST00000507302 MANSC4A6NHS7 340 aaPredicted RBP21.17■□□□□ 0.98
SNF8-205ENST00000507302 NEURL1BA8MQ27 555 aa21.17■□□□□ 0.98
SNF8-205ENST00000507302 KLRK1P26718 216 aa21.17■□□□□ 0.98
SNF8-205ENST00000507302 MKRN3Q13064 507 aaKnown RBP21.17■□□□□ 0.98
SNF8-205ENST00000507302 IFNL1Q8IU54 200 aa21.17■□□□□ 0.98
SNF8-205ENST00000507302 APAF1O14727 1248 aa21.16■□□□□ 0.98
SNF8-205ENST00000507302 CSF1RP07333 972 aa21.16■□□□□ 0.98
SNF8-205ENST00000507302 CASP7P55210 303 aa21.16■□□□□ 0.98
SNF8-205ENST00000507302 INTS3Q68E01 1043 aaKnown RBP21.16■□□□□ 0.98
SNF8-205ENST00000507302 C15orf52Q6ZUT6 534 aaKnown RBP21.16■□□□□ 0.98
SNF8-205ENST00000507302 KIAA0825Q8IV33 1275 aa21.16■□□□□ 0.98
SNF8-205ENST00000507302 TSPYL6Q8N831 410 aa21.16■□□□□ 0.98
SNF8-205ENST00000507302 ANKRD2Q9GZV1 360 aa21.16■□□□□ 0.98
SNF8-205ENST00000507302 DEFB129Q9H1M3 183 aa21.16■□□□□ 0.98
SNF8-205ENST00000507302 ANGEL1Q9UNK9 670 aaKnown RBP21.16■□□□□ 0.98
SNF8-205ENST00000507302 PPP2R3BQ9Y5P8 575 aa21.16■□□□□ 0.98
SNF8-205ENST00000507302 CWF19L2Q2TBE0 894 aaKnown RBP21.15■□□□□ 0.98
SNF8-205ENST00000507302 OTOP1Q7RTM1 612 aa21.15■□□□□ 0.98
SNF8-205ENST00000507302 IGF2BP3O00425 579 aaKnown RBP eCLIP21.14■□□□□ 0.97
SNF8-205ENST00000507302 IGHMBP2P38935 993 aaKnown RBP21.14■□□□□ 0.97
SNF8-205ENST00000507302 CERS5Q8N5B7 392 aa21.14■□□□□ 0.97
SNF8-205ENST00000507302 CD209Q9NNX6 404 aa21.14■□□□□ 0.97
SNF8-205ENST00000507302 KIAA0100Q14667 2235 aaKnown RBP21.13■□□□□ 0.97
SNF8-205ENST00000507302 ITGA6P23229 1130 aa21.13■□□□□ 0.97
SNF8-205ENST00000507302 GTF2IP78347 998 aa21.13■□□□□ 0.97
SNF8-205ENST00000507302 NEXNQ0ZGT2 675 aa21.13■□□□□ 0.97
SNF8-205ENST00000507302 PRKG1Q13976 671 aa21.13■□□□□ 0.97
SNF8-205ENST00000507302 WNK4Q96J92 1243 aa21.13■□□□□ 0.97
SNF8-205ENST00000507302 FZD1Q9UP38 647 aa21.13■□□□□ 0.97
SNF8-205ENST00000507302 CACNA1FO60840 1977 aa21.13■□□□□ 0.97
SNF8-205ENST00000507302 FKBP1AP62942 108 aaKnown RBP21.12■□□□□ 0.97
SNF8-205ENST00000507302 UBE3BQ7Z3V4 1068 aa21.12■□□□□ 0.97
SNF8-205ENST00000507302 FBXW7Q969H0 707 aa21.12■□□□□ 0.97
SNF8-205ENST00000507302 SLC10A4Q96EP9 437 aa21.12■□□□□ 0.97
SNF8-205ENST00000507302 OTOFQ9HC10 1997 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms