RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 EFCC1Q9HA90 598 aa11.79□□□□□ -0.52
PFDN1-202ENST00000507185 DMGDHQ9UI17 866 aaKnown RBP11.79□□□□□ -0.52
PFDN1-202ENST00000507185 TBC1D8BQ0IIM8 1120 aa11.78□□□□□ -0.52
PFDN1-202ENST00000507185 SWI5Q1ZZU3 235 aa11.78□□□□□ -0.52
PFDN1-202ENST00000507185 THEMISQ8N1K5 641 aaPredicted RBP11.78□□□□□ -0.52
PFDN1-202ENST00000507185 CDC42BPAQ5VT25 1732 aa11.77□□□□□ -0.52
PFDN1-202ENST00000507185 CPS1P31327 1500 aa11.77□□□□□ -0.52
PFDN1-202ENST00000507185 SPDYE3A6NKU9 549 aa11.77□□□□□ -0.53
PFDN1-202ENST00000507185 CCINQ13939 588 aa11.77□□□□□ -0.53
PFDN1-202ENST00000507185 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.53
PFDN1-202ENST00000507185 GSX2Q9BZM3 304 aa11.77□□□□□ -0.53
PFDN1-202ENST00000507185 UBE2OQ9C0C9 1292 aaKnown RBP11.77□□□□□ -0.53
PFDN1-202ENST00000507185 STARD13Q9Y3M8 1113 aa11.77□□□□□ -0.53
PFDN1-202ENST00000507185 ACIN1Q9UKV3 1341 aaKnown RBP11.77□□□□□ -0.53
PFDN1-202ENST00000507185 PLXNC1O60486 1568 aa11.76□□□□□ -0.53
PFDN1-202ENST00000507185 ZNF142P52746 1687 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-202ENST00000507185 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-202ENST00000507185 IDH3AP50213 366 aa11.76□□□□□ -0.53
PFDN1-202ENST00000507185 ELOAQ14241 798 aaKnown RBP11.76□□□□□ -0.53
PFDN1-202ENST00000507185 MICALL1Q8N3F8 863 aa11.76□□□□□ -0.53
PFDN1-202ENST00000507185 MYO19Q96H55 970 aa11.76□□□□□ -0.53
PFDN1-202ENST00000507185 PRIMPOLQ96LW4 560 aa11.76□□□□□ -0.53
PFDN1-202ENST00000507185 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-202ENST00000507185 DHX29Q7Z478 1369 aaKnown RBP11.76□□□□□ -0.53
PFDN1-202ENST00000507185 NPHP4O75161 1426 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-202ENST00000507185 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-202ENST00000507185 ALBP02768 609 aa11.75□□□□□ -0.53
PFDN1-202ENST00000507185 INPP5BP32019 993 aa11.75□□□□□ -0.53
PFDN1-202ENST00000507185 ZMIZ1Q9ULJ6 1067 aa11.75□□□□□ -0.53
PFDN1-202ENST00000507185 DNMT1P26358 1616 aaKnown RBP11.75□□□□□ -0.53
PFDN1-202ENST00000507185 C1QTNF9BB2RNN3 333 aa11.74□□□□□ -0.53
PFDN1-202ENST00000507185 PRMT3O60678 531 aa11.74□□□□□ -0.53
PFDN1-202ENST00000507185 PRDM6Q9NQX0 595 aa11.74□□□□□ -0.53
PFDN1-202ENST00000507185 FAM135AQ9P2D6 1515 aa11.74□□□□□ -0.53
PFDN1-202ENST00000507185 MICAL2O94851 1124 aa11.73□□□□□ -0.53
PFDN1-202ENST00000507185 SPATA31C1P0DKV0 1188 aa11.73□□□□□ -0.53
PFDN1-202ENST00000507185 NFKB1P19838 968 aa11.73□□□□□ -0.53
PFDN1-202ENST00000507185 ARSDP51689 593 aa11.73□□□□□ -0.53
PFDN1-202ENST00000507185 FKBP5Q13451 457 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-202ENST00000507185 PRRT3Q5FWE3 981 aa11.73□□□□□ -0.53
PFDN1-202ENST00000507185 C8orf86Q6ZUL3 223 aa11.73□□□□□ -0.53
PFDN1-202ENST00000507185 CD163Q86VB7 1156 aa11.73□□□□□ -0.53
PFDN1-202ENST00000507185 CCDC97Q96F63 343 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-202ENST00000507185 MIA2Q96PC5 1412 aa11.72□□□□□ -0.53
PFDN1-202ENST00000507185 SRPK2P78362 688 aaKnown RBP11.72□□□□□ -0.53
PFDN1-202ENST00000507185 CCDC82Q8N4S0 544 aa11.72□□□□□ -0.53
PFDN1-202ENST00000507185 STK32AQ8WU08 396 aa11.72□□□□□ -0.53
PFDN1-202ENST00000507185 IFT43Q96FT9 208 aa11.72□□□□□ -0.53
PFDN1-202ENST00000507185 SLC6A14Q9UN76 642 aa11.72□□□□□ -0.53
PFDN1-202ENST00000507185 KDM5DQ9BY66 1539 aa11.71□□□□□ -0.53
PFDN1-202ENST00000507185 PZPP20742 1482 aa11.71□□□□□ -0.53
PFDN1-202ENST00000507185 ATG7O95352 703 aa11.71□□□□□ -0.53
PFDN1-202ENST00000507185 TSPY4P0CV99 314 aa11.71□□□□□ -0.53
PFDN1-202ENST00000507185 TSPY10P0CW01 314 aa11.71□□□□□ -0.53
PFDN1-202ENST00000507185 C20orf204Q6ZNR8 217 aa11.71□□□□□ -0.53
PFDN1-202ENST00000507185 DNAJB12Q9NXW2 375 aaKnown RBP11.71□□□□□ -0.53
PFDN1-202ENST00000507185 LRFN2Q9ULH4 789 aa11.71□□□□□ -0.53
PFDN1-202ENST00000507185 NEURL4Q96JN8 1562 aa11.71□□□□□ -0.54
PFDN1-202ENST00000507185 UGGT1Q9NYU2 1555 aa11.71□□□□□ -0.54
PFDN1-202ENST00000507185 LILRB5O75023 590 aa11.7□□□□□ -0.54
PFDN1-202ENST00000507185 GRNP28799 593 aaKnown RBP11.7□□□□□ -0.54
PFDN1-202ENST00000507185 CHRNA4P43681 627 aa11.7□□□□□ -0.54
PFDN1-202ENST00000507185 BAG6P46379 1132 aa11.7□□□□□ -0.54
PFDN1-202ENST00000507185 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
PFDN1-202ENST00000507185 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
PFDN1-202ENST00000507185 RTEL1-TNFRSF6BF6WH68 1400 aa11.69□□□□□ -0.54
PFDN1-202ENST00000507185 COL9A3Q14050 684 aaPredicted RBP11.69□□□□□ -0.54
PFDN1-202ENST00000507185 COX20Q5RI15 118 aa11.69□□□□□ -0.54
PFDN1-202ENST00000507185 C11orf16Q9NQ32 467 aa11.69□□□□□ -0.54
PFDN1-202ENST00000507185 SERPINA10Q9UK55 444 aa11.69□□□□□ -0.54
PFDN1-202ENST00000507185 CCDC141Q6ZP82 1450 aa11.69□□□□□ -0.54
PFDN1-202ENST00000507185 VWDEQ8N2E2 1590 aa11.68□□□□□ -0.54
PFDN1-202ENST00000507185 PDIA4P13667 645 aaKnown RBP11.68□□□□□ -0.54
PFDN1-202ENST00000507185 TRIM28Q13263 835 aaKnown RBP11.68□□□□□ -0.54
PFDN1-202ENST00000507185 OCLNQ16625 522 aa11.68□□□□□ -0.54
PFDN1-202ENST00000507185 KRT25Q7Z3Z0 450 aa11.68□□□□□ -0.54
PFDN1-202ENST00000507185 NLRP1Q9C000 1473 aa11.68□□□□□ -0.54
PFDN1-202ENST00000507185 ADGBQ8N7X0 1667 aa11.68□□□□□ -0.54
PFDN1-202ENST00000507185 TIAM1Q13009 1591 aa11.67□□□□□ -0.54
PFDN1-202ENST00000507185 NID1P14543 1247 aa11.67□□□□□ -0.54
PFDN1-202ENST00000507185 PCSK7Q16549 785 aa11.67□□□□□ -0.54
PFDN1-202ENST00000507185 TREML1Q86YW5 311 aa11.67□□□□□ -0.54
PFDN1-202ENST00000507185 NUDT8Q8WV74 236 aa11.67□□□□□ -0.54
PFDN1-202ENST00000507185 PBXIP1Q96AQ6 731 aa11.67□□□□□ -0.54
PFDN1-202ENST00000507185 JPH1Q9HDC5 661 aaPredicted RBP11.67□□□□□ -0.54
PFDN1-202ENST00000507185 LRRC7Q96NW7 1537 aa11.66□□□□□ -0.54
PFDN1-202ENST00000507185 FAM229AH3BQW9 127 aa11.66□□□□□ -0.54
PFDN1-202ENST00000507185 OPLAHO14841 1288 aa11.66□□□□□ -0.54
PFDN1-202ENST00000507185 ADAM23O75077 832 aa11.66□□□□□ -0.54
PFDN1-202ENST00000507185 MAP3K6O95382 1288 aa11.66□□□□□ -0.54
PFDN1-202ENST00000507185 TARSP26639 723 aaKnown RBP11.66□□□□□ -0.54
PFDN1-202ENST00000507185 TRAPPC3LQ5T215 181 aa11.66□□□□□ -0.54
PFDN1-202ENST00000507185 TXNDC2Q86VQ3 553 aa11.66□□□□□ -0.54
PFDN1-202ENST00000507185 RTCBQ9Y3I0 505 aaKnown RBP11.66□□□□□ -0.54
PFDN1-202ENST00000507185 EHBP1L1Q8N3D4 1523 aa11.65□□□□□ -0.54
PFDN1-202ENST00000507185 CAMSAP2Q08AD1 1489 aa11.65□□□□□ -0.54
PFDN1-202ENST00000507185 SASH3O75995 380 aa11.65□□□□□ -0.54
PFDN1-202ENST00000507185 APBA3O96018 575 aa11.65□□□□□ -0.54
PFDN1-202ENST00000507185 TMEM164Q5U3C3 297 aa11.65□□□□□ -0.54
PFDN1-202ENST00000507185 PSAPL1Q6NUJ1 521 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms