RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 PGAP2Q9UHJ9 254 aa7.55□□□□□ -1.2
GYPB-208ENST00000507009 DUOX1Q9NRD9 1551 aa7.54□□□□□ -1.2
GYPB-208ENST00000507009 ASTN2O75129 1339 aaPredicted RBP7.54□□□□□ -1.2
GYPB-208ENST00000507009 ATP5J2-PTCD1G3V325 749 aa7.54□□□□□ -1.2
GYPB-208ENST00000507009 RIPK4P57078 832 aa7.54□□□□□ -1.2
GYPB-208ENST00000507009 KRT24Q2M2I5 525 aa7.54□□□□□ -1.2
GYPB-208ENST00000507009 KIF4BQ2VIQ3 1234 aa7.54□□□□□ -1.2
GYPB-208ENST00000507009 SULF1Q8IWU6 871 aa7.54□□□□□ -1.2
GYPB-208ENST00000507009 CELF1Q92879 486 aaKnown RBP7.54□□□□□ -1.2
GYPB-208ENST00000507009 FAM89AQ96GI7 184 aa7.54□□□□□ -1.2
GYPB-208ENST00000507009 PLEKHF1Q96S99 279 aa7.54□□□□□ -1.2
GYPB-208ENST00000507009 RNF186Q9NXI6 227 aa7.54□□□□□ -1.2
GYPB-208ENST00000507009 SCAF8Q9UPN6 1271 aaKnown RBP7.54□□□□□ -1.2
GYPB-208ENST00000507009 DDX60Q8IY21 1712 aaKnown RBP7.54□□□□□ -1.2
GYPB-208ENST00000507009 FAM155AB1AL88 458 aaPredicted RBP7.53□□□□□ -1.2
GYPB-208ENST00000507009 TCIRG1Q13488 830 aa7.53□□□□□ -1.2
GYPB-208ENST00000507009 LRP10Q7Z4F1 713 aa7.53□□□□□ -1.2
GYPB-208ENST00000507009 CCDC102AQ96A19 550 aa7.53□□□□□ -1.2
GYPB-208ENST00000507009 CDCA5Q96FF9 252 aa7.53□□□□□ -1.2
GYPB-208ENST00000507009 CCDC85AQ96PX6 553 aaPredicted RBP7.53□□□□□ -1.2
GYPB-208ENST00000507009 EYA3Q99504 573 aa7.53□□□□□ -1.2
GYPB-208ENST00000507009 PNNQ9H307 717 aaKnown RBP7.53□□□□□ -1.2
GYPB-208ENST00000507009 CHPF2Q9P2E5 772 aa7.53□□□□□ -1.2
GYPB-208ENST00000507009 POLLQ9UGP5 575 aa7.53□□□□□ -1.2
GYPB-208ENST00000507009 HDAC9Q9UKV0 1011 aa7.53□□□□□ -1.2
GYPB-208ENST00000507009 COL4A1P02462 1669 aa7.53□□□□□ -1.2
GYPB-208ENST00000507009 LRRC37AA6NMS7 1700 aa7.52□□□□□ -1.2
GYPB-208ENST00000507009 RTL9Q8NET4 1388 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 UFL1O94874 794 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 TBC1D8O95759 1140 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 SLC10A3P09131 477 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 HOXB3P14651 431 aaPredicted RBP7.52□□□□□ -1.21
GYPB-208ENST00000507009 TTLL12Q14166 644 aaPredicted RBP7.52□□□□□ -1.21
GYPB-208ENST00000507009 HDGFL1Q5TGJ6 251 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 ANGEL2Q5VTE6 544 aaKnown RBP7.52□□□□□ -1.21
GYPB-208ENST00000507009 MOB2Q70IA6 237 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 CTU1Q7Z7A3 348 aaKnown RBP7.52□□□□□ -1.21
GYPB-208ENST00000507009 CCDC146Q8IYE0 955 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 DPF2Q92785 391 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 FBXW7Q969H0 707 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 CSRNP1Q96S65 589 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 ZC3H12CQ9C0D7 883 aaKnown RBP7.52□□□□□ -1.21
GYPB-208ENST00000507009 SAGE1Q9NXZ1 904 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 ANKIB1Q9P2G1 1089 aa7.52□□□□□ -1.21
GYPB-208ENST00000507009 FAM205CA6NFA0 338 aa7.51□□□□□ -1.21
GYPB-208ENST00000507009 UBE2Q2LH0YL09 131 aa7.51□□□□□ -1.21
GYPB-208ENST00000507009 IRS4O14654 1257 aaPredicted RBP7.51□□□□□ -1.21
GYPB-208ENST00000507009 RPS12P25398 132 aaKnown RBP7.51□□□□□ -1.21
GYPB-208ENST00000507009 SCARF1Q14162 830 aa7.51□□□□□ -1.21
GYPB-208ENST00000507009 PRAMEF18Q5VWM3 479 aa7.51□□□□□ -1.21
GYPB-208ENST00000507009 TMC4Q7Z404 712 aa7.51□□□□□ -1.21
GYPB-208ENST00000507009 RASAL3Q86YV0 1011 aa7.51□□□□□ -1.21
GYPB-208ENST00000507009 TBC1D16Q8TBP0 767 aa7.51□□□□□ -1.21
GYPB-208ENST00000507009 JARID2Q92833 1246 aaPredicted RBP7.51□□□□□ -1.21
GYPB-208ENST00000507009 MS4A4AQ96JQ5 239 aa7.51□□□□□ -1.21
GYPB-208ENST00000507009 HS3ST6Q96QI5 342 aa7.51□□□□□ -1.21
GYPB-208ENST00000507009 SCN9AQ15858 1988 aa7.5□□□□□ -1.21
GYPB-208ENST00000507009 TMPOP42166 694 aaKnown RBP7.5□□□□□ -1.21
GYPB-208ENST00000507009 LMOD3Q0VAK6 560 aa7.5□□□□□ -1.21
GYPB-208ENST00000507009 PRKG1Q13976 671 aa7.5□□□□□ -1.21
GYPB-208ENST00000507009 ANKRD13DQ6ZTN6 518 aa7.5□□□□□ -1.21
GYPB-208ENST00000507009 ZNF710Q8N1W2 664 aa7.5□□□□□ -1.21
GYPB-208ENST00000507009 PLBD2Q8NHP8 589 aa7.5□□□□□ -1.21
GYPB-208ENST00000507009 RTN4Q9NQC3 1192 aaKnown RBP7.5□□□□□ -1.21
GYPB-208ENST00000507009 SEC31BQ9NQW1 1179 aa7.5□□□□□ -1.21
GYPB-208ENST00000507009 GGA1Q9UJY5 639 aa7.5□□□□□ -1.21
GYPB-208ENST00000507009 HPS5Q9UPZ3 1129 aa7.5□□□□□ -1.21
GYPB-208ENST00000507009 POTEB3A0JP26 581 aa7.49□□□□□ -1.21
GYPB-208ENST00000507009 ECM2O94769 699 aaPredicted RBP7.49□□□□□ -1.21
GYPB-208ENST00000507009 VIL1P09327 827 aaKnown RBP7.49□□□□□ -1.21
GYPB-208ENST00000507009 RPS8P62241 208 aaKnown RBP7.49□□□□□ -1.21
GYPB-208ENST00000507009 SF3B3Q15393 1217 aaKnown RBP7.49□□□□□ -1.21
GYPB-208ENST00000507009 PRPF38BQ5VTL8 546 aaKnown RBP7.49□□□□□ -1.21
GYPB-208ENST00000507009 RSBN1LQ6PCB5 846 aaPredicted RBP7.49□□□□□ -1.21
GYPB-208ENST00000507009 POTEBQ6S5H4 581 aa7.49□□□□□ -1.21
GYPB-208ENST00000507009 RIC3Q7Z5B4 369 aa7.49□□□□□ -1.21
GYPB-208ENST00000507009 ZNF296Q8WUU4 475 aaPredicted RBP7.49□□□□□ -1.21
GYPB-208ENST00000507009 MYD88Q99836 296 aa7.49□□□□□ -1.21
GYPB-208ENST00000507009 TAOK2Q9UL54 1235 aa7.49□□□□□ -1.21
GYPB-208ENST00000507009 SPEF2Q9C093 1822 aa7.49□□□□□ -1.21
GYPB-208ENST00000507009 PDE4DIPQ5VU43 2346 aa7.49□□□□□ -1.21
GYPB-208ENST00000507009 ELL2O00472 640 aaPredicted RBP7.48□□□□□ -1.21
GYPB-208ENST00000507009 TMEM92Q6UXU6 159 aa7.48□□□□□ -1.21
GYPB-208ENST00000507009 SPNS2Q8IVW8 549 aa7.48□□□□□ -1.21
GYPB-208ENST00000507009 ISCA1Q9BUE6 129 aa7.48□□□□□ -1.21
GYPB-208ENST00000507009 MXD3Q9BW11 206 aa7.48□□□□□ -1.21
GYPB-208ENST00000507009 MYOZ2Q9NPC6 264 aa7.48□□□□□ -1.21
GYPB-208ENST00000507009 DBF4Q9UBU7 674 aaPredicted RBP7.48□□□□□ -1.21
GYPB-208ENST00000507009 STK24Q9Y6E0 443 aa7.48□□□□□ -1.21
GYPB-208ENST00000507009 PAPPA2Q9BXP8 1791 aa7.48□□□□□ -1.21
GYPB-208ENST00000507009 WTIPA6NIX2 430 aaPredicted RBP7.47□□□□□ -1.21
GYPB-208ENST00000507009 SASH1O94885 1247 aa7.47□□□□□ -1.21
GYPB-208ENST00000507009 USP17L8P0C7I0 530 aa7.47□□□□□ -1.21
GYPB-208ENST00000507009 WDR43Q15061 677 aaKnown RBP eCLIP7.47□□□□□ -1.21
GYPB-208ENST00000507009 NBPF9Q3BBW0 867 aa7.47□□□□□ -1.21
GYPB-208ENST00000507009 ANKRD18AQ8IVF6 992 aa7.47□□□□□ -1.21
GYPB-208ENST00000507009 PHAXQ9H814 394 aaKnown RBP7.47□□□□□ -1.21
GYPB-208ENST00000507009 BABAM1Q9NWV8 329 aa7.47□□□□□ -1.21
GYPB-208ENST00000507009 HYPKQ9NX55 129 aa7.47□□□□□ -1.21
GYPB-208ENST00000507009 USP17L3A6NCW0 530 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms