RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 TTBK1Q5TCY1 1321 aaPredicted RBP7.39□□□□□ -1.23
HERC6-207ENST00000506842 EDN3P14138 238 aa7.39□□□□□ -1.23
HERC6-207ENST00000506842 CTBSQ01459 385 aa7.39□□□□□ -1.23
HERC6-207ENST00000506842 PEAR1Q5VY43 1037 aaPredicted RBP7.39□□□□□ -1.23
HERC6-207ENST00000506842 FOXR1Q6PIV2 292 aa7.39□□□□□ -1.23
HERC6-207ENST00000506842 FAM9AQ8IZU1 332 aaPredicted RBP7.39□□□□□ -1.23
HERC6-207ENST00000506842 VWA5B2Q8N398 1253 aa7.39□□□□□ -1.23
HERC6-207ENST00000506842 TMEM87AQ8NBN3 555 aa7.39□□□□□ -1.23
HERC6-207ENST00000506842 BHMTQ93088 406 aa7.39□□□□□ -1.23
HERC6-207ENST00000506842 TRERF1Q96PN7 1200 aa7.39□□□□□ -1.23
HERC6-207ENST00000506842 METTL5Q9NRN9 209 aaKnown RBP7.39□□□□□ -1.23
HERC6-207ENST00000506842 A0A1W2PP55 124 aa7.38□□□□□ -1.23
HERC6-207ENST00000506842 PHF20L1A8MW92 1017 aa7.38□□□□□ -1.23
HERC6-207ENST00000506842 POTECB2RU33 542 aa7.38□□□□□ -1.23
HERC6-207ENST00000506842 PSAPP07602 524 aa7.38□□□□□ -1.23
HERC6-207ENST00000506842 HDLBPQ00341 1268 aaKnown RBP7.38□□□□□ -1.23
HERC6-207ENST00000506842 COL13A1Q5TAT6 717 aaPredicted RBP7.38□□□□□ -1.23
HERC6-207ENST00000506842 SV2AQ7L0J3 742 aa7.38□□□□□ -1.23
HERC6-207ENST00000506842 GLIS3Q8NEA6 775 aa7.38□□□□□ -1.23
HERC6-207ENST00000506842 BCO2Q9BYV7 579 aa7.38□□□□□ -1.23
HERC6-207ENST00000506842 KANSL3Q9P2N6 904 aa7.38□□□□□ -1.23
HERC6-207ENST00000506842 KIAA0556O60303 1618 aa7.38□□□□□ -1.23
HERC6-207ENST00000506842 CDC14CA4D256 554 aa7.37□□□□□ -1.23
HERC6-207ENST00000506842 GPR25O00155 361 aa7.37□□□□□ -1.23
HERC6-207ENST00000506842 NRLP54845 237 aa7.37□□□□□ -1.23
HERC6-207ENST00000506842 FANCCQ00597 558 aa7.37□□□□□ -1.23
HERC6-207ENST00000506842 PLAURQ03405 335 aa7.37□□□□□ -1.23
HERC6-207ENST00000506842 HYAL2Q12891 473 aa7.37□□□□□ -1.23
HERC6-207ENST00000506842 GRM2Q14416 872 aa7.37□□□□□ -1.23
HERC6-207ENST00000506842 DHX32Q7L7V1 743 aaKnown RBP7.37□□□□□ -1.23
HERC6-207ENST00000506842 RAB44Q7Z6P3 723 aaPredicted RBP7.37□□□□□ -1.23
HERC6-207ENST00000506842 METTL16Q86W50 562 aaKnown RBP7.37□□□□□ -1.23
HERC6-207ENST00000506842 LATS2Q9NRM7 1088 aa7.37□□□□□ -1.23
HERC6-207ENST00000506842 FAM8A1Q9UBU6 413 aa7.37□□□□□ -1.23
HERC6-207ENST00000506842 CTTNBP2Q8WZ74 1663 aa7.36□□□□□ -1.23
HERC6-207ENST00000506842 C2CD2LO14523 706 aa7.36□□□□□ -1.23
HERC6-207ENST00000506842 GADD45BO75293 160 aaPredicted RBP7.36□□□□□ -1.23
HERC6-207ENST00000506842 NEUROD1Q13562 356 aa7.36□□□□□ -1.23
HERC6-207ENST00000506842 ZNF468Q5VIY5 522 aaPredicted RBP7.36□□□□□ -1.23
HERC6-207ENST00000506842 PRPF40BQ6NWY9 871 aaKnown RBP7.36□□□□□ -1.23
HERC6-207ENST00000506842 NXPE4Q6UWF7 544 aa7.36□□□□□ -1.23
HERC6-207ENST00000506842 TRPM4Q8TD43 1214 aa7.36□□□□□ -1.23
HERC6-207ENST00000506842 USP31Q70CQ4 1352 aa7.35□□□□□ -1.23
HERC6-207ENST00000506842 ABCA8O94911 1581 aa7.35□□□□□ -1.23
HERC6-207ENST00000506842 USP17L7P0C7H9 530 aa7.35□□□□□ -1.23
HERC6-207ENST00000506842 GPLD1P80108 840 aa7.35□□□□□ -1.23
HERC6-207ENST00000506842 GAS6Q14393 721 aa7.35□□□□□ -1.23
HERC6-207ENST00000506842 CEP120Q8N960 986 aa7.35□□□□□ -1.23
HERC6-207ENST00000506842 CNTNAP3BQ96NU0 1288 aa7.35□□□□□ -1.23
HERC6-207ENST00000506842 CNTNAP3Q9BZ76 1288 aa7.35□□□□□ -1.23
HERC6-207ENST00000506842 AVENQ9NQS1 362 aaPredicted RBP7.35□□□□□ -1.23
HERC6-207ENST00000506842 TRAK1Q9UPV9 953 aa7.35□□□□□ -1.23
HERC6-207ENST00000506842 EPRSP07814 1512 aaKnown RBP7.35□□□□□ -1.23
HERC6-207ENST00000506842 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 SIN3BO75182 1162 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 ZNF76P36508 570 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 ST13P50502 369 aaKnown RBP7.34□□□□□ -1.23
HERC6-207ENST00000506842 NPAS3Q8IXF0 933 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 C3orf58Q8NDZ4 430 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 ANKRD24Q8TF21 1146 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 RNF34Q969K3 372 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 C8orf37Q96NL8 207 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 TCF12Q99081 682 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 ZKSCAN3Q9BRR0 538 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 EHD4Q9H223 541 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 DZANK1Q9NVP4 752 aa7.34□□□□□ -1.23
HERC6-207ENST00000506842 TSPOAP1O95153 1857 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 NFKBIEO00221 500 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 ACPPP15309 386 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 PTPN12Q05209 780 aaKnown RBP7.33□□□□□ -1.24
HERC6-207ENST00000506842 RAD51AP2Q09MP3 1159 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 SYT9Q86SS6 491 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 NCAPG2Q86XI2 1143 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 CCNJLQ8IV13 435 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 OSMRQ99650 979 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 MDFIQ99750 246 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 ABCB6Q9NP58 842 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 NXF1Q9UBU9 619 aaKnown RBP7.33□□□□□ -1.24
HERC6-207ENST00000506842 PRR12Q9ULL5 1215 aa7.33□□□□□ -1.24
HERC6-207ENST00000506842 ATP10BO94823 1461 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 COL17A1Q9UMD9 1497 aaPredicted RBP7.32□□□□□ -1.24
HERC6-207ENST00000506842 WDR7Q9Y4E6 1490 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 ZCCHC11Q5TAX3 1644 aaKnown RBP7.32□□□□□ -1.24
HERC6-207ENST00000506842 LOC102724428A0A0B4J2F2 783 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 VSIG8P0DPA2 414 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 BMP4P12644 408 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 GSTT1P30711 240 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 SIK1P57059 783 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 TAF1CQ15572 869 aaPredicted RBP7.32□□□□□ -1.24
HERC6-207ENST00000506842 PCSK7Q16549 785 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 MEI1Q5TIA1 1274 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 C9orf131Q5VYM1 1079 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 NT5DC4Q86YG4 428 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 TNFRSF25Q93038 417 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 NSUN5Q96P11 429 aaKnown RBP7.32□□□□□ -1.24
HERC6-207ENST00000506842 LIN7BQ9HAP6 207 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 DNAJB12Q9NXW2 375 aaKnown RBP7.32□□□□□ -1.24
HERC6-207ENST00000506842 KLF15Q9UIH9 416 aa7.32□□□□□ -1.24
HERC6-207ENST00000506842 TMEM238LA0A1B0GVL6 79 aa7.31□□□□□ -1.24
HERC6-207ENST00000506842 H3BM21 787 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms